RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 OVOS2A0A0G2JMS6 1433 aa27.42■■□□□ 1.98
C4orf48-202ENST00000409860 PRKAR2BP31323 418 aa27.42■■□□□ 1.98
C4orf48-202ENST00000409860 SEPT12Q8IYM1 358 aa27.41■■□□□ 1.98
C4orf48-202ENST00000409860 ADAMTS8Q9UP79 889 aa27.41■■□□□ 1.98
C4orf48-202ENST00000409860 WNK3Q9BYP7 1800 aa27.4■■□□□ 1.98
C4orf48-202ENST00000409860 NEFMP07197 916 aa27.4■■□□□ 1.98
C4orf48-202ENST00000409860 DDB1Q16531 1140 aa27.4■■□□□ 1.98
C4orf48-202ENST00000409860 THSD7AQ9UPZ6 1657 aa27.4■■□□□ 1.98
C4orf48-202ENST00000409860 PARP4Q9UKK3 1724 aaKnown RBP27.39■■□□□ 1.98
C4orf48-202ENST00000409860 EXOC5O00471 708 aa27.39■■□□□ 1.98
C4orf48-202ENST00000409860 AMOTQ4VCS5 1084 aa27.38■■□□□ 1.97
C4orf48-202ENST00000409860 PLEKHO1Q53GL0 409 aaPredicted RBP27.38■■□□□ 1.97
C4orf48-202ENST00000409860 ZCRB1Q8TBF4 217 aaKnown RBP27.38■■□□□ 1.97
C4orf48-202ENST00000409860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.38■■□□□ 1.97
C4orf48-202ENST00000409860 SPG7Q9UQ90 795 aa27.38■■□□□ 1.97
C4orf48-202ENST00000409860 TNS2Q63HR2 1409 aa27.38■■□□□ 1.97
C4orf48-202ENST00000409860 RGS12O14924 1447 aa27.37■■□□□ 1.97
C4orf48-202ENST00000409860 FAM9BQ8IZU0 186 aa27.36■■□□□ 1.97
C4orf48-202ENST00000409860 MAPK8IP3Q9UPT6 1336 aa27.36■■□□□ 1.97
C4orf48-202ENST00000409860 PDE3BQ13370 1112 aa27.34■■□□□ 1.97
C4orf48-202ENST00000409860 LRRC37A3O60309 1634 aa27.34■■□□□ 1.97
C4orf48-202ENST00000409860 PLEKHF1Q96S99 279 aa27.33■■□□□ 1.97
C4orf48-202ENST00000409860 PCDH11XQ9BZA7 1347 aa27.33■■□□□ 1.97
C4orf48-202ENST00000409860 PCDH11YQ9BZA8 1340 aa27.33■■□□□ 1.97
C4orf48-202ENST00000409860 CCDC146Q8IYE0 955 aa27.32■■□□□ 1.96
C4orf48-202ENST00000409860 RUNDC1Q96C34 613 aa27.32■■□□□ 1.96
C4orf48-202ENST00000409860 ZNF530Q6P9A1 599 aaPredicted RBP27.31■■□□□ 1.96
C4orf48-202ENST00000409860 GAS2L2Q8NHY3 880 aa27.31■■□□□ 1.96
C4orf48-202ENST00000409860 PHACTR3Q96KR7 559 aa27.31■■□□□ 1.96
C4orf48-202ENST00000409860 DDX54Q8TDD1 881 aaKnown RBP27.3■■□□□ 1.96
C4orf48-202ENST00000409860 PKD1L3Q7Z443 1732 aa27.3■■□□□ 1.96
C4orf48-202ENST00000409860 MTHFSDQ2M296 383 aaKnown RBP27.29■■□□□ 1.96
C4orf48-202ENST00000409860 KRT27Q7Z3Y8 459 aa27.29■■□□□ 1.96
C4orf48-202ENST00000409860 C1orf141Q5JVX7 400 aa27.28■■□□□ 1.96
C4orf48-202ENST00000409860 IFNL2Q8IZJ0 200 aa27.27■■□□□ 1.96
C4orf48-202ENST00000409860 CYP27B1O15528 508 aa27.25■■□□□ 1.95
C4orf48-202ENST00000409860 PHKG2P15735 406 aa27.25■■□□□ 1.95
C4orf48-202ENST00000409860 MARCH10Q8NA82 808 aaPredicted RBP27.25■■□□□ 1.95
C4orf48-202ENST00000409860 NFE2L2Q16236 605 aa27.24■■□□□ 1.95
C4orf48-202ENST00000409860 AKAP4Q5JQC9 854 aa27.24■■□□□ 1.95
C4orf48-202ENST00000409860 HSP90AB1P08238 724 aaKnown RBP27.23■■□□□ 1.95
C4orf48-202ENST00000409860 SHANK3Q9BYB0 1731 aa27.21■■□□□ 1.95
C4orf48-202ENST00000409860 MAP3K5Q99683 1374 aa27.21■■□□□ 1.95
C4orf48-202ENST00000409860 GNAT3A8MTJ3 354 aa27.19■■□□□ 1.94
C4orf48-202ENST00000409860 APAF1O14727 1248 aa27.19■■□□□ 1.94
C4orf48-202ENST00000409860 TMPOP42166 694 aaKnown RBP27.19■■□□□ 1.94
C4orf48-202ENST00000409860 NKX1-1Q15270 411 aaPredicted RBP27.19■■□□□ 1.94
C4orf48-202ENST00000409860 BRWD3Q6RI45 1802 aa27.18■■□□□ 1.94
C4orf48-202ENST00000409860 RIPK4P57078 832 aa27.17■■□□□ 1.94
C4orf48-202ENST00000409860 FAM182BQ5T319 152 aa27.17■■□□□ 1.94
C4orf48-202ENST00000409860 FAM196AQ6ZSG2 479 aa27.17■■□□□ 1.94
C4orf48-202ENST00000409860 DCAF5Q96JK2 942 aa27.17■■□□□ 1.94
C4orf48-202ENST00000409860 RRP7AQ9Y3A4 280 aaKnown RBP27.17■■□□□ 1.94
C4orf48-202ENST00000409860 BCL9O00512 1426 aa27.16■■□□□ 1.94
C4orf48-202ENST00000409860 LMOD3Q0VAK6 560 aa27.16■■□□□ 1.94
C4orf48-202ENST00000409860 RTF1Q92541 710 aaKnown RBP27.16■■□□□ 1.94
C4orf48-202ENST00000409860 HTATSF1O43719 755 aaKnown RBP27.15■■□□□ 1.94
C4orf48-202ENST00000409860 NEUROD2Q15784 382 aa27.15■■□□□ 1.94
C4orf48-202ENST00000409860 MPRIPQ6WCQ1 1025 aa27.14■■□□□ 1.94
C4orf48-202ENST00000409860 KDM6AO15550 1401 aaPredicted RBP27.12■■□□□ 1.93
C4orf48-202ENST00000409860 RNMTO43148 476 aaKnown RBP27.11■■□□□ 1.93
C4orf48-202ENST00000409860 ERVV-2B6SEH9 535 aa27.09■■□□□ 1.93
C4orf48-202ENST00000409860 NGEFQ8N5V2 710 aa27.09■■□□□ 1.93
C4orf48-202ENST00000409860 ACSBG1Q96GR2 724 aa27.09■■□□□ 1.93
C4orf48-202ENST00000409860 NCBP3Q53F19 620 aaKnown RBP27.08■■□□□ 1.93
C4orf48-202ENST00000409860 MCM10Q7L590 875 aa27.08■■□□□ 1.93
C4orf48-202ENST00000409860 LGR6Q9HBX8 967 aa27.08■■□□□ 1.93
C4orf48-202ENST00000409860 SENP3-EIF4A1A0A087X0R7 540 aa27.07■■□□□ 1.92
C4orf48-202ENST00000409860 IL17REQ8NFR9 667 aa27.07■■□□□ 1.92
C4orf48-202ENST00000409860 SYTL4Q96C24 671 aaPredicted RBP27.07■■□□□ 1.92
C4orf48-202ENST00000409860 CABP4P57796 275 aa27.06■■□□□ 1.92
C4orf48-202ENST00000409860 DCTN1Q14203 1278 aa27.06■■□□□ 1.92
C4orf48-202ENST00000409860 TRIM35Q9UPQ4 493 aa27.06■■□□□ 1.92
C4orf48-202ENST00000409860 CEMIPQ8WUJ3 1361 aa27.06■■□□□ 1.92
C4orf48-202ENST00000409860 PRIM1P49642 420 aaKnown RBP27.05■■□□□ 1.92
C4orf48-202ENST00000409860 TEFQ10587 303 aa27.05■■□□□ 1.92
C4orf48-202ENST00000409860 CCDC27Q2M243 656 aa27.05■■□□□ 1.92
C4orf48-202ENST00000409860 TMOD3Q9NYL9 352 aa27.05■■□□□ 1.92
C4orf48-202ENST00000409860 SLC52A2Q9HAB3 445 aa27.04■■□□□ 1.92
C4orf48-202ENST00000409860 SALL2Q9Y467 1007 aaPredicted RBP27.04■■□□□ 1.92
C4orf48-202ENST00000409860 ILDR2Q71H61 639 aa27.03■■□□□ 1.92
C4orf48-202ENST00000409860 DOT1LQ8TEK3 1739 aa27.03■■□□□ 1.92
C4orf48-202ENST00000409860 ADAMTS7Q9UKP4 1686 aa27.03■■□□□ 1.92
C4orf48-202ENST00000409860 TOGARAM1Q9Y4F4 1720 aa27.02■■□□□ 1.92
C4orf48-202ENST00000409860 MRC1P22897 1456 aa27.02■■□□□ 1.92
C4orf48-202ENST00000409860 KCNQ2O43526 872 aa27.02■■□□□ 1.92
C4orf48-202ENST00000409860 TRIM37O94972 964 aa27.02■■□□□ 1.92
C4orf48-202ENST00000409860 THUMPD2Q9BTF0 503 aaKnown RBP27.02■■□□□ 1.92
C4orf48-202ENST00000409860 BCL11BQ9C0K0 894 aaPredicted RBP27.02■■□□□ 1.92
C4orf48-202ENST00000409860 DLG5Q8TDM6 1919 aa27.02■■□□□ 1.92
C4orf48-202ENST00000409860 SCN11AQ9UI33 1791 aa27.01■■□□□ 1.91
C4orf48-202ENST00000409860 CALD1Q05682 793 aaKnown RBP27■■□□□ 1.91
C4orf48-202ENST00000409860 NFATC2IPQ8NCF5 419 aa27■■□□□ 1.91
C4orf48-202ENST00000409860 NHSQ6T4R5 1651 aa27■■□□□ 1.91
C4orf48-202ENST00000409860 HNRNPUQ00839 825 aaKnown RBP eCLIP26.99■■□□□ 1.91
C4orf48-202ENST00000409860 WWC1Q8IX03 1113 aa26.99■■□□□ 1.91
C4orf48-202ENST00000409860 PIGBQ92521 554 aa26.98■■□□□ 1.91
C4orf48-202ENST00000409860 TAF7Q15545 349 aaPredicted RBP26.95■■□□□ 1.9
C4orf48-202ENST00000409860 PTF1AQ7RTS3 328 aa26.95■■□□□ 1.9
C4orf48-202ENST00000409860 SBF2Q86WG5 1849 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms