RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CCDC125Q86Z20 511 aa30.2■■■□□ 2.43
PTCD3-203ENST00000409783 ZCRB1Q8TBF4 217 aaKnown RBP30.2■■■□□ 2.43
PTCD3-203ENST00000409783 DIAPH1O60610 1272 aaKnown RBP30.19■■■□□ 2.42
PTCD3-203ENST00000409783 RALBP1Q15311 655 aa30.18■■■□□ 2.42
PTCD3-203ENST00000409783 KDRP35968 1356 aa30.17■■■□□ 2.42
PTCD3-203ENST00000409783 AEBP1Q8IUX7 1158 aa30.17■■■□□ 2.42
PTCD3-203ENST00000409783 PLEKHG2Q9H7P9 1386 aa30.15■■■□□ 2.42
PTCD3-203ENST00000409783 TRIM37O94972 964 aa30.14■■■□□ 2.42
PTCD3-203ENST00000409783 DDX54Q8TDD1 881 aaKnown RBP30.14■■■□□ 2.42
PTCD3-203ENST00000409783 SULT6B1Q6IMI4 303 aa30.13■■■□□ 2.41
PTCD3-203ENST00000409783 CFAP53Q96M91 514 aa30.12■■■□□ 2.41
PTCD3-203ENST00000409783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.11■■■□□ 2.413e-8■■■□□ 15.5
PTCD3-203ENST00000409783 CYP27B1O15528 508 aa30.1■■■□□ 2.41
PTCD3-203ENST00000409783 NHSQ6T4R5 1651 aa30.1■■■□□ 2.41
PTCD3-203ENST00000409783 PTF1AQ7RTS3 328 aa30.09■■■□□ 2.41
PTCD3-203ENST00000409783 PCDH11XQ9BZA7 1347 aa30.09■■■□□ 2.41
PTCD3-203ENST00000409783 PCDH11YQ9BZA8 1340 aa30.09■■■□□ 2.41
PTCD3-203ENST00000409783 PRKRIP1Q9H875 184 aaPredicted RBP30.09■■■□□ 2.41
PTCD3-203ENST00000409783 MYBBP1AQ9BQG0 1328 aaKnown RBP30.06■■■□□ 2.4
PTCD3-203ENST00000409783 HMOX1P09601 288 aa30.06■■■□□ 2.4
PTCD3-203ENST00000409783 DEFB132Q7Z7B7 95 aa30.06■■■□□ 2.4
PTCD3-203ENST00000409783 SPG7Q9UQ90 795 aa30.06■■■□□ 2.4
PTCD3-203ENST00000409783 DOT1LQ8TEK3 1739 aa30.05■■■□□ 2.4
PTCD3-203ENST00000409783 SF3B2Q13435 895 aaKnown RBP30.05■■■□□ 2.4
PTCD3-203ENST00000409783 BCL11BQ9C0K0 894 aaPredicted RBP30.05■■■□□ 2.4
PTCD3-203ENST00000409783 KAT6BQ8WYB5 2073 aa30.04■■■□□ 2.4
PTCD3-203ENST00000409783 U2SURPO15042 1029 aaKnown RBP30.04■■■□□ 2.4
PTCD3-203ENST00000409783 KCNQ2O43526 872 aa30.04■■■□□ 2.4
PTCD3-203ENST00000409783 ACSBG1Q96GR2 724 aa30.03■■■□□ 2.4
PTCD3-203ENST00000409783 TOGARAM1Q9Y4F4 1720 aa30.02■■■□□ 2.4
PTCD3-203ENST00000409783 NKX1-1Q15270 411 aaPredicted RBP30.01■■■□□ 2.39
PTCD3-203ENST00000409783 PLEKHO1Q53GL0 409 aaPredicted RBP30.01■■■□□ 2.39
PTCD3-203ENST00000409783 APBA3O96018 575 aa30■■■□□ 2.39
PTCD3-203ENST00000409783 PHKG2P15735 406 aa30■■■□□ 2.39
PTCD3-203ENST00000409783 BAG6P46379 1132 aa30■■■□□ 2.39
PTCD3-203ENST00000409783 AMOTQ4VCS5 1084 aa30■■■□□ 2.39
PTCD3-203ENST00000409783 NUDCQ9Y266 331 aa30■■■□□ 2.39
PTCD3-203ENST00000409783 BTAF1O14981 1849 aa29.99■■■□□ 2.39
PTCD3-203ENST00000409783 EN1Q05925 392 aaPredicted RBP29.98■■■□□ 2.39
PTCD3-203ENST00000409783 IFNL2Q8IZJ0 200 aa29.98■■■□□ 2.39
PTCD3-203ENST00000409783 RGPD3A6NKT7 1758 aaPredicted RBP29.98■■■□□ 2.39
PTCD3-203ENST00000409783 RGPD4Q7Z3J3 1758 aa29.98■■■□□ 2.39
PTCD3-203ENST00000409783 CAMKK2Q96RR4 588 aa29.97■■■□□ 2.39
PTCD3-203ENST00000409783 RSPH6AQ9H0K4 717 aa29.96■■■□□ 2.39
PTCD3-203ENST00000409783 ITGB4P16144 1822 aa29.96■■■□□ 2.39
PTCD3-203ENST00000409783 PRIM1P49642 420 aaKnown RBP29.95■■■□□ 2.39
PTCD3-203ENST00000409783 ZNF530Q6P9A1 599 aaPredicted RBP29.95■■■□□ 2.39
PTCD3-203ENST00000409783 U2AF1L5P0DN76 240 aaPredicted RBP29.94■■■□□ 2.38
PTCD3-203ENST00000409783 U2AF1Q01081 240 aaKnown RBP eCLIP29.94■■■□□ 2.38
PTCD3-203ENST00000409783 RREB1Q92766 1687 aa29.93■■■□□ 2.38
PTCD3-203ENST00000409783 PLSCR1O15162 318 aa29.93■■■□□ 2.38
PTCD3-203ENST00000409783 EZH2Q15910 746 aaKnown RBP29.93■■■□□ 2.38
PTCD3-203ENST00000409783 MTHFSDQ2M296 383 aaKnown RBP29.91■■■□□ 2.38
PTCD3-203ENST00000409783 FCHSD2O94868 740 aa29.9■■■□□ 2.38
PTCD3-203ENST00000409783 PRKAR2BP31323 418 aa29.9■■■□□ 2.38
PTCD3-203ENST00000409783 KDM6AO15550 1401 aaPredicted RBP29.89■■■□□ 2.38
PTCD3-203ENST00000409783 SYTL4Q96C24 671 aaPredicted RBP29.88■■■□□ 2.37
PTCD3-203ENST00000409783 PHACTR3Q96KR7 559 aa29.88■■■□□ 2.37
PTCD3-203ENST00000409783 NUP188Q5SRE5 1749 aa29.87■■■□□ 2.37
PTCD3-203ENST00000409783 SCN11AQ9UI33 1791 aa29.87■■■□□ 2.37
PTCD3-203ENST00000409783 VIRMAQ69YN4 1812 aaKnown RBP29.87■■■□□ 2.37
PTCD3-203ENST00000409783 HSP90AB1P08238 724 aaKnown RBP29.86■■■□□ 2.37
PTCD3-203ENST00000409783 C1orf141Q5JVX7 400 aa29.86■■■□□ 2.37
PTCD3-203ENST00000409783 PROM2Q8N271 834 aa29.86■■■□□ 2.37
PTCD3-203ENST00000409783 DCAF5Q96JK2 942 aa29.86■■■□□ 2.37
PTCD3-203ENST00000409783 ADAMTS7Q9UKP4 1686 aa29.85■■■□□ 2.37
PTCD3-203ENST00000409783 AKAP4Q5JQC9 854 aa29.85■■■□□ 2.37
PTCD3-203ENST00000409783 LY75O60449 1722 aa29.83■■■□□ 2.37
PTCD3-203ENST00000409783 ANP32CO43423 234 aa29.83■■■□□ 2.37
PTCD3-203ENST00000409783 MPRIPQ6WCQ1 1025 aa29.82■■■□□ 2.36
PTCD3-203ENST00000409783 PIGBQ92521 554 aa29.82■■■□□ 2.36
PTCD3-203ENST00000409783 PLEKHF1Q96S99 279 aa29.82■■■□□ 2.36
PTCD3-203ENST00000409783 ERVV-2B6SEH9 535 aa29.81■■■□□ 2.36
PTCD3-203ENST00000409783 CCDC184Q52MB2 194 aa29.81■■■□□ 2.36
PTCD3-203ENST00000409783 GAS2L2Q8NHY3 880 aa29.8■■■□□ 2.36
PTCD3-203ENST00000409783 TXNRD1Q16881 649 aa29.79■■■□□ 2.36
PTCD3-203ENST00000409783 LGR6Q9HBX8 967 aa29.78■■■□□ 2.36
PTCD3-203ENST00000409783 TMOD3Q9NYL9 352 aa29.77■■■□□ 2.36
PTCD3-203ENST00000409783 MAP3K5Q99683 1374 aa29.77■■■□□ 2.36
PTCD3-203ENST00000409783 MRC1P22897 1456 aa29.76■■■□□ 2.35
PTCD3-203ENST00000409783 RNMTO43148 476 aaKnown RBP29.76■■■□□ 2.35
PTCD3-203ENST00000409783 DLG5Q8TDM6 1919 aa29.74■■■□□ 2.35
PTCD3-203ENST00000409783 GNAT3A8MTJ3 354 aa29.73■■■□□ 2.35
PTCD3-203ENST00000409783 LRRC4BQ9NT99 713 aa29.73■■■□□ 2.35
PTCD3-203ENST00000409783 PAPPAQ13219 1627 aa29.73■■■□□ 2.35
PTCD3-203ENST00000409783 CABP4P57796 275 aa29.72■■■□□ 2.35
PTCD3-203ENST00000409783 IL17REQ8NFR9 667 aa29.72■■■□□ 2.35
PTCD3-203ENST00000409783 ADAMTS8Q9UP79 889 aa29.72■■■□□ 2.35
PTCD3-203ENST00000409783 PALLDQ8WX93 1383 aa29.72■■■□□ 2.35
PTCD3-203ENST00000409783 WDR43Q15061 677 aaKnown RBP eCLIP29.71■■■□□ 2.35
PTCD3-203ENST00000409783 NFATC2IPQ8NCF5 419 aa29.71■■■□□ 2.35
PTCD3-203ENST00000409783 PNNQ9H307 717 aaKnown RBP29.71■■■□□ 2.35
PTCD3-203ENST00000409783 ASAP1Q9ULH1 1129 aa29.71■■■□□ 2.35
PTCD3-203ENST00000409783 SLC52A2Q9HAB3 445 aa29.7■■■□□ 2.35
PTCD3-203ENST00000409783 ATG3Q9NT62 314 aa29.7■■■□□ 2.35
PTCD3-203ENST00000409783 SIPA1L3O60292 1781 aaPredicted RBP29.69■■■□□ 2.34
PTCD3-203ENST00000409783 SLC27A3Q5K4L6 730 aa29.69■■■□□ 2.34
PTCD3-203ENST00000409783 SMARCC1Q92922 1105 aaPredicted RBP29.69■■■□□ 2.34
PTCD3-203ENST00000409783 CEMIPQ8WUJ3 1361 aa29.68■■■□□ 2.34
PTCD3-203ENST00000409783 ANO8Q9HCE9 1232 aaPredicted RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms