RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
SHANK2-204ENST00000409530 LMOD3Q0VAK6 560 aa20.41■□□□□ 0.86
SHANK2-204ENST00000409530 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
SHANK2-204ENST00000409530 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
SHANK2-204ENST00000409530 NCAPD2Q15021 1401 aa20.41■□□□□ 0.86
SHANK2-204ENST00000409530 TATP17735 454 aaPredicted RBP20.4■□□□□ 0.86
SHANK2-204ENST00000409530 LRP6O75581 1613 aa20.4■□□□□ 0.86
SHANK2-204ENST00000409530 MAP3K5Q99683 1374 aa20.4■□□□□ 0.86
SHANK2-204ENST00000409530 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.85
SHANK2-204ENST00000409530 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
SHANK2-204ENST00000409530 GNAT3A8MTJ3 354 aa20.38■□□□□ 0.85
SHANK2-204ENST00000409530 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
SHANK2-204ENST00000409530 CRB1P82279 1406 aa20.38■□□□□ 0.85
SHANK2-204ENST00000409530 NRAPQ86VF7 1730 aa20.37■□□□□ 0.85
SHANK2-204ENST00000409530 MEX3CQ5U5Q3 659 aaKnown RBP20.37■□□□□ 0.85
SHANK2-204ENST00000409530 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
SHANK2-204ENST00000409530 PARP4Q9UKK3 1724 aaKnown RBP20.37■□□□□ 0.85
SHANK2-204ENST00000409530 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
SHANK2-204ENST00000409530 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
SHANK2-204ENST00000409530 NGLY1Q96IV0 654 aa20.36■□□□□ 0.85
SHANK2-204ENST00000409530 RCAN3Q9UKA8 241 aa20.36■□□□□ 0.85
SHANK2-204ENST00000409530 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
SHANK2-204ENST00000409530 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
SHANK2-204ENST00000409530 TRMT2AQ8IZ69 625 aaKnown RBP20.34■□□□□ 0.85
SHANK2-204ENST00000409530 CARD10Q9BWT7 1032 aa20.34■□□□□ 0.85
SHANK2-204ENST00000409530 AMOTQ4VCS5 1084 aa20.33■□□□□ 0.85
SHANK2-204ENST00000409530 CALD1Q05682 793 aaKnown RBP20.33■□□□□ 0.84
SHANK2-204ENST00000409530 EXOSC9Q06265 439 aaKnown RBP20.33■□□□□ 0.84
SHANK2-204ENST00000409530 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.84
SHANK2-204ENST00000409530 LGR6Q9HBX8 967 aa20.33■□□□□ 0.84
SHANK2-204ENST00000409530 MBIPQ9NS73 344 aa20.33■□□□□ 0.84
SHANK2-204ENST00000409530 PKD1L3Q7Z443 1732 aa20.32■□□□□ 0.84
SHANK2-204ENST00000409530 SPATA31A6Q5VVP1 1343 aa20.32■□□□□ 0.84
SHANK2-204ENST00000409530 IL2RBP14784 551 aa20.32■□□□□ 0.84
SHANK2-204ENST00000409530 LRRC37A3O60309 1634 aa20.32■□□□□ 0.84
SHANK2-204ENST00000409530 NEFLP07196 543 aa20.32■□□□□ 0.84
SHANK2-204ENST00000409530 IL17REQ8NFR9 667 aa20.32■□□□□ 0.84
SHANK2-204ENST00000409530 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
SHANK2-204ENST00000409530 OVOS2A0A0G2JMS6 1433 aa20.31■□□□□ 0.84
SHANK2-204ENST00000409530 NWD2Q9ULI1 1742 aa20.31■□□□□ 0.84
SHANK2-204ENST00000409530 ELL2O00472 640 aaPredicted RBP20.31■□□□□ 0.84
SHANK2-204ENST00000409530 GNAI1P63096 354 aa20.31■□□□□ 0.84
SHANK2-204ENST00000409530 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
SHANK2-204ENST00000409530 BCL2L13Q9BXK5 485 aa20.31■□□□□ 0.84
SHANK2-204ENST00000409530 IL16Q14005 1332 aa20.31■□□□□ 0.84
SHANK2-204ENST00000409530 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
SHANK2-204ENST00000409530 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
SHANK2-204ENST00000409530 FKBP8Q14318 412 aa20.3■□□□□ 0.84
SHANK2-204ENST00000409530 DDX54Q8TDD1 881 aaKnown RBP20.3■□□□□ 0.84
SHANK2-204ENST00000409530 SLIT2O94813 1529 aa20.3■□□□□ 0.84
SHANK2-204ENST00000409530 PLIN1O60240 522 aa20.29■□□□□ 0.84
SHANK2-204ENST00000409530 CFAP44Q96MT7 982 aa20.29■□□□□ 0.84
SHANK2-204ENST00000409530 WNK3Q9BYP7 1800 aa20.28■□□□□ 0.84
SHANK2-204ENST00000409530 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
SHANK2-204ENST00000409530 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
SHANK2-204ENST00000409530 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
SHANK2-204ENST00000409530 CYP27B1O15528 508 aa20.27■□□□□ 0.84
SHANK2-204ENST00000409530 PHKG2P15735 406 aa20.27■□□□□ 0.84
SHANK2-204ENST00000409530 ZCRB1Q8TBF4 217 aaKnown RBP20.27■□□□□ 0.84
SHANK2-204ENST00000409530 BCAR3O75815 825 aa20.26■□□□□ 0.83
SHANK2-204ENST00000409530 TEFQ10587 303 aa20.26■□□□□ 0.83
SHANK2-204ENST00000409530 A0A0G2JS52 829 aa20.26■□□□□ 0.83
SHANK2-204ENST00000409530 MYT1Q01538 1121 aa20.26■□□□□ 0.83
SHANK2-204ENST00000409530 USP21Q9UK80 565 aa20.26■□□□□ 0.83
SHANK2-204ENST00000409530 RNMTO43148 476 aaKnown RBP20.25■□□□□ 0.83
SHANK2-204ENST00000409530 ZNF853P0CG23 659 aa20.25■□□□□ 0.83
SHANK2-204ENST00000409530 UNC5CLQ8IV45 518 aa20.25■□□□□ 0.83
SHANK2-204ENST00000409530 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
SHANK2-204ENST00000409530 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
SHANK2-204ENST00000409530 KDM6AO15550 1401 aaPredicted RBP20.25■□□□□ 0.83
SHANK2-204ENST00000409530 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
SHANK2-204ENST00000409530 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
SHANK2-204ENST00000409530 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
SHANK2-204ENST00000409530 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
SHANK2-204ENST00000409530 BCL9LQ86UU0 1499 aa20.24■□□□□ 0.83
SHANK2-204ENST00000409530 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
SHANK2-204ENST00000409530 SCN11AQ9UI33 1791 aa20.24■□□□□ 0.83
SHANK2-204ENST00000409530 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
SHANK2-204ENST00000409530 CEMIPQ8WUJ3 1361 aa20.23■□□□□ 0.83
SHANK2-204ENST00000409530 C8orf58Q8NAV2 365 aa20.23■□□□□ 0.83
SHANK2-204ENST00000409530 AFF2P51816 1311 aa20.22■□□□□ 0.83
SHANK2-204ENST00000409530 CHL1O00533 1208 aa20.21■□□□□ 0.83
SHANK2-204ENST00000409530 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
SHANK2-204ENST00000409530 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
SHANK2-204ENST00000409530 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
SHANK2-204ENST00000409530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.21■□□□□ 0.83
SHANK2-204ENST00000409530 SPATA31A5Q5VU36 1347 aa20.21■□□□□ 0.83
SHANK2-204ENST00000409530 SPATA31A7Q8IWB4 1347 aa20.21■□□□□ 0.83
SHANK2-204ENST00000409530 DISP2A7MBM2 1401 aa20.21■□□□□ 0.83
SHANK2-204ENST00000409530 TAF7Q15545 349 aaPredicted RBP20.2■□□□□ 0.82
SHANK2-204ENST00000409530 TWISTNBQ3B726 338 aaPredicted RBP20.2■□□□□ 0.82
SHANK2-204ENST00000409530 BTBD11A6QL63 1104 aa20.2■□□□□ 0.82
SHANK2-204ENST00000409530 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
SHANK2-204ENST00000409530 KAT6BQ8WYB5 2073 aa20.19■□□□□ 0.82
SHANK2-204ENST00000409530 KCNQ3O43525 872 aa20.19■□□□□ 0.82
SHANK2-204ENST00000409530 RARSP54136 660 aaKnown RBP20.19■□□□□ 0.82
SHANK2-204ENST00000409530 SIPA1L3O60292 1781 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-204ENST00000409530 KDM3BQ7LBC6 1761 aa20.18■□□□□ 0.82
SHANK2-204ENST00000409530 FNBP4Q8N3X1 1017 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-204ENST00000409530 NFATC2IPQ8NCF5 419 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms