RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
PRAME-206ENST00000406503 PKD1L3Q7Z443 1732 aa18.18■□□□□ 0.5
PRAME-206ENST00000406503 AKT1S1Q96B36 256 aa18.18■□□□□ 0.5
PRAME-206ENST00000406503 COG3Q96JB2 828 aa18.18■□□□□ 0.5
PRAME-206ENST00000406503 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
PRAME-206ENST00000406503 DDX54Q8TDD1 881 aaKnown RBP18.17■□□□□ 0.5
PRAME-206ENST00000406503 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
PRAME-206ENST00000406503 USP47Q96K76 1375 aa18.16■□□□□ 0.5
PRAME-206ENST00000406503 FYB1O15117 783 aa18.15■□□□□ 0.5
PRAME-206ENST00000406503 KCNQ4P56696 695 aa18.15■□□□□ 0.5
PRAME-206ENST00000406503 RRS1Q15050 365 aaKnown RBP18.15■□□□□ 0.5
PRAME-206ENST00000406503 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
PRAME-206ENST00000406503 NBPF4Q96M43 638 aa18.14■□□□□ 0.49
PRAME-206ENST00000406503 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.49
PRAME-206ENST00000406503 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
PRAME-206ENST00000406503 AMPHP49418 695 aa18.13■□□□□ 0.49
PRAME-206ENST00000406503 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
PRAME-206ENST00000406503 SLC27A3Q5K4L6 730 aa18.13■□□□□ 0.49
PRAME-206ENST00000406503 ARXQ96QS3 562 aa18.13■□□□□ 0.49
PRAME-206ENST00000406503 GGNBP2Q9H3C7 697 aa18.13■□□□□ 0.49
PRAME-206ENST00000406503 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
PRAME-206ENST00000406503 ZCRB1Q8TBF4 217 aaKnown RBP18.12■□□□□ 0.49
PRAME-206ENST00000406503 UBR3Q6ZT12 1888 aa18.11■□□□□ 0.49
PRAME-206ENST00000406503 NCAPD2Q15021 1401 aa18.09■□□□□ 0.49
PRAME-206ENST00000406503 INSRP06213 1382 aa18.09■□□□□ 0.49
PRAME-206ENST00000406503 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
PRAME-206ENST00000406503 TMF1P82094 1093 aa18.09■□□□□ 0.49
PRAME-206ENST00000406503 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
PRAME-206ENST00000406503 HSP90AB2PQ58FF8 381 aa18.08■□□□□ 0.48
PRAME-206ENST00000406503 ZNF784Q8NCA9 323 aaPredicted RBP18.08■□□□□ 0.48
PRAME-206ENST00000406503 C4BP0C0L5 1744 aa18.07■□□□□ 0.48
PRAME-206ENST00000406503 SLC16A10Q8TF71 515 aa18.07■□□□□ 0.48
PRAME-206ENST00000406503 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
PRAME-206ENST00000406503 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
PRAME-206ENST00000406503 FLT4P35916 1363 aa18.06■□□□□ 0.48
PRAME-206ENST00000406503 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
PRAME-206ENST00000406503 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
PRAME-206ENST00000406503 NSD3Q9BZ95 1437 aa18.05■□□□□ 0.48
PRAME-206ENST00000406503 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
PRAME-206ENST00000406503 CCNL1Q9UK58 526 aaPredicted RBP18.04■□□□□ 0.48
PRAME-206ENST00000406503 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
PRAME-206ENST00000406503 CYP27B1O15528 508 aa18.02■□□□□ 0.48
PRAME-206ENST00000406503 COL23A1Q86Y22 540 aaPredicted RBP18.02■□□□□ 0.48
PRAME-206ENST00000406503 NLGN2Q8NFZ4 835 aa18.02■□□□□ 0.48
PRAME-206ENST00000406503 PCDH11XQ9BZA7 1347 aa18.01■□□□□ 0.47
PRAME-206ENST00000406503 PCDH11YQ9BZA8 1340 aa18.01■□□□□ 0.47
PRAME-206ENST00000406503 TRIM26Q12899 539 aaPredicted RBP18.01■□□□□ 0.47
PRAME-206ENST00000406503 RAPGEF4Q8WZA2 1011 aa18.01■□□□□ 0.47
PRAME-206ENST00000406503 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
PRAME-206ENST00000406503 CEP350Q5VT06 3117 aa17.99■□□□□ 0.47
PRAME-206ENST00000406503 POLD1P28340 1107 aa17.99■□□□□ 0.47
PRAME-206ENST00000406503 PALLDQ8WX93 1383 aa17.99■□□□□ 0.47
PRAME-206ENST00000406503 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
PRAME-206ENST00000406503 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
PRAME-206ENST00000406503 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
PRAME-206ENST00000406503 COL5A3P25940 1745 aaPredicted RBP17.96■□□□□ 0.47
PRAME-206ENST00000406503 KIAA1551Q9HCM1 1747 aa17.95■□□□□ 0.46
PRAME-206ENST00000406503 GPR162Q16538 588 aa17.95■□□□□ 0.46
PRAME-206ENST00000406503 MSL1Q68DK7 614 aa17.95■□□□□ 0.46
PRAME-206ENST00000406503 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
PRAME-206ENST00000406503 ZNF831Q5JPB2 1677 aa17.95■□□□□ 0.46
PRAME-206ENST00000406503 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
PRAME-206ENST00000406503 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
PRAME-206ENST00000406503 YBX3P16989 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
PRAME-206ENST00000406503 NKX1-1Q15270 411 aaPredicted RBP17.94■□□□□ 0.46
PRAME-206ENST00000406503 WASHC2AQ641Q2 1341 aa17.94■□□□□ 0.46
PRAME-206ENST00000406503 PIGBQ92521 554 aa17.93■□□□□ 0.46
PRAME-206ENST00000406503 EYA1Q99502 592 aa17.93■□□□□ 0.46
PRAME-206ENST00000406503 MYH14Q7Z406 1995 aaKnown RBP17.92■□□□□ 0.46
PRAME-206ENST00000406503 SMIM5Q71RC9 77 aa17.92■□□□□ 0.46
PRAME-206ENST00000406503 POLKQ9UBT6 870 aa17.92■□□□□ 0.46
PRAME-206ENST00000406503 MSH5O43196 834 aa17.91■□□□□ 0.46
PRAME-206ENST00000406503 C4AP0C0L4 1744 aa17.9■□□□□ 0.46
PRAME-206ENST00000406503 PPM1GO15355 546 aaPredicted RBP17.9■□□□□ 0.46
PRAME-206ENST00000406503 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
PRAME-206ENST00000406503 BRCA1P38398 1863 aaKnown RBP17.89■□□□□ 0.45
PRAME-206ENST00000406503 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
PRAME-206ENST00000406503 C1QTNF8P60827 252 aa17.88■□□□□ 0.45
PRAME-206ENST00000406503 LINC00116Q8NCU8 138 aa17.88■□□□□ 0.45
PRAME-206ENST00000406503 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
PRAME-206ENST00000406503 EIF4A2Q14240 407 aaKnown RBP17.87■□□□□ 0.45
PRAME-206ENST00000406503 SMARCC1Q92922 1105 aaPredicted RBP17.87■□□□□ 0.45
PRAME-206ENST00000406503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRAME-206ENST00000406503 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
PRAME-206ENST00000406503 PHKG2P15735 406 aa17.86■□□□□ 0.45
PRAME-206ENST00000406503 ITPK1Q13572 414 aa17.86■□□□□ 0.45
PRAME-206ENST00000406503 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
PRAME-206ENST00000406503 SPG7Q9UQ90 795 aa17.86■□□□□ 0.45
PRAME-206ENST00000406503 KDRP35968 1356 aa17.86■□□□□ 0.45
PRAME-206ENST00000406503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.85■□□□□ 0.45
PRAME-206ENST00000406503 LOC102724428A0A0B4J2F2 783 aa17.85■□□□□ 0.45
PRAME-206ENST00000406503 SIK1P57059 783 aa17.85■□□□□ 0.45
PRAME-206ENST00000406503 TJP1Q07157 1748 aa17.85■□□□□ 0.45
PRAME-206ENST00000406503 AK7Q96M32 723 aa17.85■□□□□ 0.45
PRAME-206ENST00000406503 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
PRAME-206ENST00000406503 CD2APQ9Y5K6 639 aa17.85■□□□□ 0.45
PRAME-206ENST00000406503 CICQ96RK0 1608 aaPredicted RBP17.84■□□□□ 0.45
PRAME-206ENST00000406503 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
PRAME-206ENST00000406503 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
PRAME-206ENST00000406503 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms