RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 DOT1LQ8TEK3 1739 aa21.49■■□□□ 1.03
GDPD3-202ENST00000406256 KAT6BQ8WYB5 2073 aa21.48■■□□□ 1.03
GDPD3-202ENST00000406256 TOGARAM1Q9Y4F4 1720 aa21.48■■□□□ 1.03
GDPD3-202ENST00000406256 FAM196AQ6ZSG2 479 aa21.48■■□□□ 1.03
GDPD3-202ENST00000406256 PLEKHG2Q9H7P9 1386 aa21.47■■□□□ 1.03
GDPD3-202ENST00000406256 RAPGEF4Q8WZA2 1011 aa21.47■■□□□ 1.03
GDPD3-202ENST00000406256 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
GDPD3-202ENST00000406256 TATP17735 454 aaPredicted RBP21.46■■□□□ 1.03
GDPD3-202ENST00000406256 RALBP1Q15311 655 aa21.45■■□□□ 1.02
GDPD3-202ENST00000406256 ZCRB1Q8TBF4 217 aaKnown RBP21.45■■□□□ 1.02
GDPD3-202ENST00000406256 PTF1AQ7RTS3 328 aa21.44■■□□□ 1.02
GDPD3-202ENST00000406256 BTAF1O14981 1849 aa21.43■■□□□ 1.02
GDPD3-202ENST00000406256 ITGB4P16144 1822 aa21.43■■□□□ 1.02
GDPD3-202ENST00000406256 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
GDPD3-202ENST00000406256 CYP27B1O15528 508 aa21.43■■□□□ 1.02
GDPD3-202ENST00000406256 PRKRIP1Q9H875 184 aaPredicted RBP21.43■■□□□ 1.02
GDPD3-202ENST00000406256 RGPD3A6NKT7 1758 aaPredicted RBP21.42■■□□□ 1.02
GDPD3-202ENST00000406256 RGPD4Q7Z3J3 1758 aa21.42■■□□□ 1.02
GDPD3-202ENST00000406256 TRIM37O94972 964 aa21.42■■□□□ 1.02
GDPD3-202ENST00000406256 SULT6B1Q6IMI4 303 aa21.42■■□□□ 1.02
GDPD3-202ENST00000406256 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
GDPD3-202ENST00000406256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.41■■□□□ 1.02
GDPD3-202ENST00000406256 RREB1Q92766 1687 aa21.41■■□□□ 1.02
GDPD3-202ENST00000406256 DDX54Q8TDD1 881 aaKnown RBP21.4■■□□□ 1.02
GDPD3-202ENST00000406256 PCDH11XQ9BZA7 1347 aa21.4■■□□□ 1.02
GDPD3-202ENST00000406256 PCDH11YQ9BZA8 1340 aa21.4■■□□□ 1.02
GDPD3-202ENST00000406256 MYBBP1AQ9BQG0 1328 aaKnown RBP21.39■■□□□ 1.01
GDPD3-202ENST00000406256 HMOX1P09601 288 aa21.38■■□□□ 1.01
GDPD3-202ENST00000406256 DEFB132Q7Z7B7 95 aa21.38■■□□□ 1.01
GDPD3-202ENST00000406256 KCNQ2O43526 872 aa21.37■■□□□ 1.01
GDPD3-202ENST00000406256 CFAP53Q96M91 514 aa21.37■■□□□ 1.01
GDPD3-202ENST00000406256 SCN11AQ9UI33 1791 aa21.36■■□□□ 1.01
GDPD3-202ENST00000406256 ADAMTS7Q9UKP4 1686 aa21.36■■□□□ 1.01
GDPD3-202ENST00000406256 NUP188Q5SRE5 1749 aa21.36■■□□□ 1.01
GDPD3-202ENST00000406256 NKX1-1Q15270 411 aaPredicted RBP21.36■■□□□ 1.01
GDPD3-202ENST00000406256 ACSBG1Q96GR2 724 aa21.36■■□□□ 1.01
GDPD3-202ENST00000406256 BCL11BQ9C0K0 894 aaPredicted RBP21.36■■□□□ 1.01
GDPD3-202ENST00000406256 SPG7Q9UQ90 795 aa21.35■■□□□ 1.01
GDPD3-202ENST00000406256 U2SURPO15042 1029 aaKnown RBP21.34■■□□□ 1.01
GDPD3-202ENST00000406256 PHKG2P15735 406 aa21.34■■□□□ 1.01
GDPD3-202ENST00000406256 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
GDPD3-202ENST00000406256 KDM6AO15550 1401 aaPredicted RBP21.33■■□□□ 1.01
GDPD3-202ENST00000406256 LY75O60449 1722 aa21.32■■□□□ 1
GDPD3-202ENST00000406256 EN1Q05925 392 aaPredicted RBP21.32■■□□□ 1
GDPD3-202ENST00000406256 CAMKK2Q96RR4 588 aa21.32■■□□□ 1
GDPD3-202ENST00000406256 PLEKHO1Q53GL0 409 aaPredicted RBP21.31■■□□□ 1
GDPD3-202ENST00000406256 APBA3O96018 575 aa21.3■■□□□ 1
GDPD3-202ENST00000406256 BAG6P46379 1132 aa21.3■■□□□ 1
GDPD3-202ENST00000406256 AMOTQ4VCS5 1084 aa21.3■■□□□ 1
GDPD3-202ENST00000406256 IFNL2Q8IZJ0 200 aa21.3■■□□□ 1
GDPD3-202ENST00000406256 DLG5Q8TDM6 1919 aa21.3■■□□□ 1
GDPD3-202ENST00000406256 SF3B2Q13435 895 aaKnown RBP21.29■■□□□ 1
GDPD3-202ENST00000406256 ZNF530Q6P9A1 599 aaPredicted RBP21.29■■□□□ 1
GDPD3-202ENST00000406256 NUDCQ9Y266 331 aa21.29■■□□□ 1
GDPD3-202ENST00000406256 PRIM1P49642 420 aaKnown RBP21.28■■□□□ 1
GDPD3-202ENST00000406256 EZH2Q15910 746 aaKnown RBP21.28■■□□□ 1
GDPD3-202ENST00000406256 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
GDPD3-202ENST00000406256 PLSCR1O15162 318 aa21.27■■□□□ 1
GDPD3-202ENST00000406256 U2AF1L5P0DN76 240 aaPredicted RBP21.27■■□□□ 1
GDPD3-202ENST00000406256 PRKAR2BP31323 418 aa21.27■■□□□ 1
GDPD3-202ENST00000406256 U2AF1Q01081 240 aaKnown RBP eCLIP21.27■■□□□ 1
GDPD3-202ENST00000406256 PHACTR3Q96KR7 559 aa21.27■■□□□ 1
GDPD3-202ENST00000406256 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
GDPD3-202ENST00000406256 PROM2Q8N271 834 aa21.26■□□□□ 0.99
GDPD3-202ENST00000406256 PAPPAQ13219 1627 aa21.26■□□□□ 0.99
GDPD3-202ENST00000406256 SIPA1L3O60292 1781 aaPredicted RBP21.25■□□□□ 0.99
GDPD3-202ENST00000406256 FCHSD2O94868 740 aa21.25■□□□□ 0.99
GDPD3-202ENST00000406256 MRC1P22897 1456 aa21.25■□□□□ 0.99
GDPD3-202ENST00000406256 PLEKHF1Q96S99 279 aa21.23■□□□□ 0.99
GDPD3-202ENST00000406256 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
GDPD3-202ENST00000406256 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
GDPD3-202ENST00000406256 SYTL4Q96C24 671 aaPredicted RBP21.22■□□□□ 0.99
GDPD3-202ENST00000406256 DCAF5Q96JK2 942 aa21.22■□□□□ 0.99
GDPD3-202ENST00000406256 MPRIPQ6WCQ1 1025 aa21.21■□□□□ 0.99
GDPD3-202ENST00000406256 PIGBQ92521 554 aa21.21■□□□□ 0.99
GDPD3-202ENST00000406256 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
GDPD3-202ENST00000406256 C1orf141Q5JVX7 400 aa21.2■□□□□ 0.98
GDPD3-202ENST00000406256 ANP32CO43423 234 aa21.19■□□□□ 0.98
GDPD3-202ENST00000406256 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
GDPD3-202ENST00000406256 MAP3K5Q99683 1374 aa21.19■□□□□ 0.98
GDPD3-202ENST00000406256 SRCAPQ6ZRS2 3230 aa21.19■□□□□ 0.98
GDPD3-202ENST00000406256 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
GDPD3-202ENST00000406256 TXNRD1Q16881 649 aa21.18■□□□□ 0.98
GDPD3-202ENST00000406256 GAS2L2Q8NHY3 880 aa21.18■□□□□ 0.98
GDPD3-202ENST00000406256 TUBGCP6Q96RT7 1819 aa21.17■□□□□ 0.98
GDPD3-202ENST00000406256 LRRC4BQ9NT99 713 aa21.17■□□□□ 0.98
GDPD3-202ENST00000406256 UBR2Q8IWV8 1755 aa21.16■□□□□ 0.98
GDPD3-202ENST00000406256 C5P01031 1676 aa21.16■□□□□ 0.98
GDPD3-202ENST00000406256 ZNF831Q5JPB2 1677 aa21.16■□□□□ 0.98
GDPD3-202ENST00000406256 CEMIPQ8WUJ3 1361 aa21.16■□□□□ 0.98
GDPD3-202ENST00000406256 RNMTO43148 476 aaKnown RBP21.16■□□□□ 0.98
GDPD3-202ENST00000406256 IL17REQ8NFR9 667 aa21.15■□□□□ 0.98
GDPD3-202ENST00000406256 ADAMTS8Q9UP79 889 aa21.15■□□□□ 0.98
GDPD3-202ENST00000406256 PALLDQ8WX93 1383 aa21.14■□□□□ 0.98
GDPD3-202ENST00000406256 CICQ96RK0 1608 aaPredicted RBP21.14■□□□□ 0.98
GDPD3-202ENST00000406256 ANO8Q9HCE9 1232 aaPredicted RBP21.14■□□□□ 0.98
GDPD3-202ENST00000406256 TMOD3Q9NYL9 352 aa21.14■□□□□ 0.98
GDPD3-202ENST00000406256 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
GDPD3-202ENST00000406256 ATG3Q9NT62 314 aa21.13■□□□□ 0.97
GDPD3-202ENST00000406256 ASAP1Q9ULH1 1129 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms