RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PPIP5K1Q6PFW1 1433 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 VGLL3A8MV65 326 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 KCNJ4P48050 445 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 TRERF1Q96PN7 1200 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 NFAT5O94916 1531 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 ERICH4A6NGS2 130 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 GPS2Q13227 327 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 PDCL2Q8N4E4 241 aa7.19□□□□□ -1.26
HDAC9-203ENST00000406072 CDCA7LQ96GN5 454 aa7.18□□□□□ -1.26
HDAC9-203ENST00000406072 NCAPD2Q15021 1401 aa7.18□□□□□ -1.26
HDAC9-203ENST00000406072 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
HDAC9-203ENST00000406072 KIF3AQ9Y496 699 aa7.18□□□□□ -1.26
HDAC9-203ENST00000406072 NSD3Q9BZ95 1437 aa7.18□□□□□ -1.26
HDAC9-203ENST00000406072 ITPRIPQ8IWB1 547 aa7.18□□□□□ -1.26
HDAC9-203ENST00000406072 TTC21AQ8NDW8 1320 aa7.18□□□□□ -1.26
HDAC9-203ENST00000406072 CHGAP10645 457 aaKnown RBP7.17□□□□□ -1.26
HDAC9-203ENST00000406072 NOL8Q76FK4 1167 aaKnown RBP7.17□□□□□ -1.26
HDAC9-203ENST00000406072 PEAK1Q9H792 1746 aa7.17□□□□□ -1.26
HDAC9-203ENST00000406072 ZNF692Q9BU19 519 aaPredicted RBP7.17□□□□□ -1.26
HDAC9-203ENST00000406072 ADAMTS7Q9UKP4 1686 aa7.17□□□□□ -1.26
HDAC9-203ENST00000406072 SPDYE4A6NLX3 237 aa7.17□□□□□ -1.26
HDAC9-203ENST00000406072 SASS6Q6UVJ0 657 aa7.17□□□□□ -1.26
HDAC9-203ENST00000406072 SMAP1Q8IYB5 467 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-203ENST00000406072 PXDNQ92626 1479 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 APBB1O00213 710 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 DYNC1I1O14576 645 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 IGSF3O75054 1194 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 TMEM132AQ24JP5 1023 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 NOM1Q5C9Z4 860 aaKnown RBP7.16□□□□□ -1.26
HDAC9-203ENST00000406072 NGEFQ8N5V2 710 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 CFAP53Q96M91 514 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 LRRC37A3O60309 1634 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 COL18A1P39060 1754 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 RTL1A6NKG5 1358 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 SETQ01105 290 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-203ENST00000406072 PPP4R3BQ5MIZ7 849 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 TMEM132EQ6IEE7 984 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 CCDC146Q8IYE0 955 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 IFT57Q9NWB7 429 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 PLCH1Q4KWH8 1693 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 ST18O60284 1047 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 MCCP23508 829 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 IRX3P78415 501 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-203ENST00000406072 CFAP44Q96MT7 982 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 TRAK1Q9UPV9 953 aa7.16□□□□□ -1.26
HDAC9-203ENST00000406072 SBNO1A3KN83 1393 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 BCL2L13Q9BXK5 485 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 CARD14Q9BXL6 1004 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 AMOTL2Q9Y2J4 779 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 LTN1O94822 1766 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 CDK19Q9BWU1 502 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 PANK3Q9H999 370 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 TERF2IPQ9NYB0 399 aa7.15□□□□□ -1.26
HDAC9-203ENST00000406072 C1orf167Q5SNV9 1468 aa7.15□□□□□ -1.27
HDAC9-203ENST00000406072 PATL2C9JE40 543 aaKnown RBP7.15□□□□□ -1.27
HDAC9-203ENST00000406072 NPHP1O15259 732 aa7.15□□□□□ -1.27
HDAC9-203ENST00000406072 LETM1O95202 739 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-203ENST00000406072 NUCB2P80303 420 aa7.15□□□□□ -1.27
HDAC9-203ENST00000406072 SENP3Q9H4L4 574 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-203ENST00000406072 KIF16BQ96L93 1317 aa7.14□□□□□ -1.27
HDAC9-203ENST00000406072 PRR36Q9H6K5 1346 aa7.14□□□□□ -1.27
HDAC9-203ENST00000406072 WNK3Q9BYP7 1800 aa7.14□□□□□ -1.27
HDAC9-203ENST00000406072 MAP2P11137 1827 aaKnown RBP7.14□□□□□ -1.27
HDAC9-203ENST00000406072 FBXO3Q9UK99 471 aa7.14□□□□□ -1.27
HDAC9-203ENST00000406072 DMRT2Q9Y5R5 561 aa7.14□□□□□ -1.27
HDAC9-203ENST00000406072 PRPF40AO75400 957 aaKnown RBP7.14□□□□□ -1.27
HDAC9-203ENST00000406072 GNL2Q13823 731 aaKnown RBP7.14□□□□□ -1.27
HDAC9-203ENST00000406072 CCAR2Q8N163 923 aaKnown RBP7.14□□□□□ -1.27
HDAC9-203ENST00000406072 PARP4Q9UKK3 1724 aaKnown RBP7.13□□□□□ -1.27
HDAC9-203ENST00000406072 CWC15Q9P013 229 aaKnown RBP7.13□□□□□ -1.27
HDAC9-203ENST00000406072 GTPBP4Q9BZE4 634 aaKnown RBP7.13□□□□□ -1.27
HDAC9-203ENST00000406072 CCDC61Q9Y6R9 512 aa7.13□□□□□ -1.27
HDAC9-203ENST00000406072 CALCOCO1Q9P1Z2 691 aa7.13□□□□□ -1.27
HDAC9-203ENST00000406072 OFD1O75665 1012 aa7.12□□□□□ -1.27
HDAC9-203ENST00000406072 IPO8O15397 1037 aaKnown RBP7.12□□□□□ -1.27
HDAC9-203ENST00000406072 TIGD1Q96MW7 591 aa7.12□□□□□ -1.27
HDAC9-203ENST00000406072 DNAJC2Q99543 621 aaKnown RBP7.12□□□□□ -1.27
HDAC9-203ENST00000406072 CCDC94Q9BW85 323 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-203ENST00000406072 TSPYL1Q9H0U9 437 aa7.12□□□□□ -1.27
HDAC9-203ENST00000406072 SMC4Q9NTJ3 1288 aa7.12□□□□□ -1.27
HDAC9-203ENST00000406072 USP19O94966 1318 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 KIF20AO95235 890 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 HDGFL2Q7Z4V5 671 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-203ENST00000406072 PANK1Q8TE04 598 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 PNISRQ8TF01 805 aaKnown RBP7.11□□□□□ -1.27
HDAC9-203ENST00000406072 NUDT16Q96DE0 195 aaKnown RBP7.11□□□□□ -1.27
HDAC9-203ENST00000406072 TBC1D2Q9BYX2 928 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 PKD1L3Q7Z443 1732 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 CALRP27797 417 aaKnown RBP7.11□□□□□ -1.27
HDAC9-203ENST00000406072 GPATCH11Q8N954 259 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 DEF6Q9H4E7 631 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 PPP2R1AP30153 589 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 ANKRD45Q5TZF3 282 aa7.11□□□□□ -1.27
HDAC9-203ENST00000406072 ARGLU1Q9NWB6 273 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-203ENST00000406072 CCDC112Q8NEF3 446 aa7.1□□□□□ -1.27
HDAC9-203ENST00000406072 TPD52L1Q16890 204 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-203ENST00000406072 SPC24Q8NBT2 197 aa7.1□□□□□ -1.27
HDAC9-203ENST00000406072 TSPY26PQ9H489 355 aa7.1□□□□□ -1.27
HDAC9-203ENST00000406072 CHMP3Q9Y3E7 222 aa7.1□□□□□ -1.27
HDAC9-203ENST00000406072 NCKAP5LQ9HCH0 1330 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms