RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 PLEKHG2Q9H7P9 1386 aa28.11■■■□□ 2.09
PDGFA-204ENST00000405692 EN1Q05925 392 aaPredicted RBP28.11■■■□□ 2.09
PDGFA-204ENST00000405692 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
PDGFA-204ENST00000405692 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
PDGFA-204ENST00000405692 PARD3Q8TEW0 1356 aa28.11■■■□□ 2.09
PDGFA-204ENST00000405692 SPG7Q9UQ90 795 aa28.1■■■□□ 2.09
PDGFA-204ENST00000405692 IL13P35225 146 aa28.09■■■□□ 2.09
PDGFA-204ENST00000405692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.09■■■□□ 2.09
PDGFA-204ENST00000405692 DDX10Q13206 875 aaKnown RBP28.08■■■□□ 2.09
PDGFA-204ENST00000405692 SBF2Q86WG5 1849 aa28.07■■■□□ 2.08
PDGFA-204ENST00000405692 DIAPH1O60610 1272 aaKnown RBP28.07■■■□□ 2.08
PDGFA-204ENST00000405692 CFAP53Q96M91 514 aa28.07■■■□□ 2.08
PDGFA-204ENST00000405692 ACSBG1Q96GR2 724 aa28.06■■■□□ 2.08
PDGFA-204ENST00000405692 CAMKK2Q96RR4 588 aa28.06■■■□□ 2.08
PDGFA-204ENST00000405692 PLSCR1O15162 318 aa28.05■■■□□ 2.08
PDGFA-204ENST00000405692 EZH2Q15910 746 aaKnown RBP28.04■■■□□ 2.08
PDGFA-204ENST00000405692 PPP2R1AP30153 589 aa28.02■■■□□ 2.08
PDGFA-204ENST00000405692 SULT6B1Q6IMI4 303 aa28.02■■■□□ 2.08
PDGFA-204ENST00000405692 SHANK3Q9BYB0 1731 aa28.01■■■□□ 2.07
PDGFA-204ENST00000405692 NHSQ6T4R5 1651 aa28.01■■■□□ 2.07
PDGFA-204ENST00000405692 KCNQ2O43526 872 aa28.01■■■□□ 2.07
PDGFA-204ENST00000405692 AMOTQ4VCS5 1084 aa28.01■■■□□ 2.07
PDGFA-204ENST00000405692 PLEKHO1Q53GL0 409 aaPredicted RBP28.01■■■□□ 2.07
PDGFA-204ENST00000405692 PKD1L3Q7Z443 1732 aa28.01■■■□□ 2.07
PDGFA-204ENST00000405692 KDRP35968 1356 aa27.99■■■□□ 2.07
PDGFA-204ENST00000405692 CYP27B1O15528 508 aa27.99■■■□□ 2.07
PDGFA-204ENST00000405692 PTF1AQ7RTS3 328 aa27.99■■■□□ 2.07
PDGFA-204ENST00000405692 IFNL2Q8IZJ0 200 aa27.98■■■□□ 2.07
PDGFA-204ENST00000405692 SYTL4Q96C24 671 aaPredicted RBP27.98■■■□□ 2.07
PDGFA-204ENST00000405692 PRIM1P49642 420 aaKnown RBP27.97■■■□□ 2.07
PDGFA-204ENST00000405692 RALBP1Q15311 655 aa27.97■■■□□ 2.07
PDGFA-204ENST00000405692 AEBP1Q8IUX7 1158 aa27.97■■■□□ 2.07
PDGFA-204ENST00000405692 NUDCQ9Y266 331 aa27.96■■■□□ 2.07
PDGFA-204ENST00000405692 RGPD3A6NKT7 1758 aaPredicted RBP27.96■■■□□ 2.07
PDGFA-204ENST00000405692 RGPD4Q7Z3J3 1758 aa27.96■■■□□ 2.07
PDGFA-204ENST00000405692 NKX1-1Q15270 411 aaPredicted RBP27.95■■■□□ 2.06
PDGFA-204ENST00000405692 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.06
PDGFA-204ENST00000405692 ZNF316A6NFI3 1004 aaPredicted RBP27.94■■■□□ 2.06
PDGFA-204ENST00000405692 U2SURPO15042 1029 aaKnown RBP27.94■■■□□ 2.06
PDGFA-204ENST00000405692 PHKG2P15735 406 aa27.94■■■□□ 2.06
PDGFA-204ENST00000405692 HSP90AB1P08238 724 aaKnown RBP27.93■■■□□ 2.06
PDGFA-204ENST00000405692 NBPF14Q5TI25 921 aa27.93■■■□□ 2.06
PDGFA-204ENST00000405692 HMOX1P09601 288 aa27.92■■■□□ 2.06
PDGFA-204ENST00000405692 DOT1LQ8TEK3 1739 aa27.91■■■□□ 2.06
PDGFA-204ENST00000405692 KAT6BQ8WYB5 2073 aa27.9■■■□□ 2.06
PDGFA-204ENST00000405692 C1orf141Q5JVX7 400 aa27.9■■■□□ 2.06
PDGFA-204ENST00000405692 ZNF530Q6P9A1 599 aaPredicted RBP27.9■■■□□ 2.06
PDGFA-204ENST00000405692 RREB1Q92766 1687 aa27.9■■■□□ 2.06
PDGFA-204ENST00000405692 TXNRD1Q16881 649 aa27.89■■■□□ 2.06
PDGFA-204ENST00000405692 BTAF1O14981 1849 aa27.88■■■□□ 2.05
PDGFA-204ENST00000405692 DCAF5Q96JK2 942 aa27.86■■■□□ 2.05
PDGFA-204ENST00000405692 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
PDGFA-204ENST00000405692 PROM2Q8N271 834 aa27.85■■■□□ 2.05
PDGFA-204ENST00000405692 NUP188Q5SRE5 1749 aa27.84■■■□□ 2.05
PDGFA-204ENST00000405692 HMGB2P26583 209 aaKnown RBP27.83■■■□□ 2.05
PDGFA-204ENST00000405692 SLC27A3Q5K4L6 730 aa27.83■■■□□ 2.05
PDGFA-204ENST00000405692 TMOD3Q9NYL9 352 aa27.83■■■□□ 2.05
PDGFA-204ENST00000405692 ERVV-2B6SEH9 535 aa27.82■■■□□ 2.04
PDGFA-204ENST00000405692 U2AF1L5P0DN76 240 aaPredicted RBP27.82■■■□□ 2.04
PDGFA-204ENST00000405692 U2AF1Q01081 240 aaKnown RBP eCLIP27.82■■■□□ 2.04
PDGFA-204ENST00000405692 AKAP4Q5JQC9 854 aa27.82■■■□□ 2.04
PDGFA-204ENST00000405692 SMARCC1Q92922 1105 aaPredicted RBP27.82■■■□□ 2.04
PDGFA-204ENST00000405692 MYBBP1AQ9BQG0 1328 aaKnown RBP27.82■■■□□ 2.04
PDGFA-204ENST00000405692 R3HDM1Q15032 1099 aaKnown RBP27.8■■■□□ 2.04
PDGFA-204ENST00000405692 PSDA5PKW4 1024 aaPredicted RBP27.79■■■□□ 2.04
PDGFA-204ENST00000405692 FCHSD2O94868 740 aa27.79■■■□□ 2.04
PDGFA-204ENST00000405692 PIGBQ92521 554 aa27.79■■■□□ 2.04
PDGFA-204ENST00000405692 GAS2L2Q8NHY3 880 aa27.78■■■□□ 2.04
PDGFA-204ENST00000405692 TOGARAM1Q9Y4F4 1720 aa27.78■■■□□ 2.04
PDGFA-204ENST00000405692 MTHFSDQ2M296 383 aaKnown RBP27.77■■■□□ 2.04
PDGFA-204ENST00000405692 RSPH6AQ9H0K4 717 aa27.77■■■□□ 2.04
PDGFA-204ENST00000405692 STK32BQ9NY57 414 aa27.77■■■□□ 2.04
PDGFA-204ENST00000405692 PRKAR2BP31323 418 aa27.76■■■□□ 2.03
PDGFA-204ENST00000405692 CABP4P57796 275 aa27.76■■■□□ 2.03
PDGFA-204ENST00000405692 PRKRIP1Q9H875 184 aaPredicted RBP27.76■■■□□ 2.03
PDGFA-204ENST00000405692 NEFMP07197 916 aa27.75■■■□□ 2.03
PDGFA-204ENST00000405692 PALLDQ8WX93 1383 aa27.74■■■□□ 2.03
PDGFA-204ENST00000405692 ITGB4P16144 1822 aa27.74■■■□□ 2.03
PDGFA-204ENST00000405692 CCNL1Q9UK58 526 aaPredicted RBP27.74■■■□□ 2.03
PDGFA-204ENST00000405692 KDM6AO15550 1401 aaPredicted RBP27.74■■■□□ 2.03
PDGFA-204ENST00000405692 PNNQ9H307 717 aaKnown RBP27.73■■■□□ 2.03
PDGFA-204ENST00000405692 LRRC4BQ9NT99 713 aa27.73■■■□□ 2.03
PDGFA-204ENST00000405692 SLC15A2Q16348 729 aa27.72■■■□□ 2.03
PDGFA-204ENST00000405692 ANO8Q9HCE9 1232 aaPredicted RBP27.72■■■□□ 2.03
PDGFA-204ENST00000405692 LY75O60449 1722 aa27.71■■■□□ 2.03
PDGFA-204ENST00000405692 GNAT3A8MTJ3 354 aa27.69■■■□□ 2.02
PDGFA-204ENST00000405692 RNMTO43148 476 aaKnown RBP27.68■■■□□ 2.02
PDGFA-204ENST00000405692 MAP3K5Q99683 1374 aa27.68■■■□□ 2.02
PDGFA-204ENST00000405692 NFATC2IPQ8NCF5 419 aa27.67■■■□□ 2.02
PDGFA-204ENST00000405692 PHACTR3Q96KR7 559 aa27.67■■■□□ 2.02
PDGFA-204ENST00000405692 ASAP1Q9ULH1 1129 aa27.67■■■□□ 2.02
PDGFA-204ENST00000405692 SLC52A2Q9HAB3 445 aa27.66■■■□□ 2.02
PDGFA-204ENST00000405692 ATG3Q9NT62 314 aa27.66■■■□□ 2.02
PDGFA-204ENST00000405692 LGR6Q9HBX8 967 aa27.65■■■□□ 2.02
PDGFA-204ENST00000405692 PAPPAQ13219 1627 aa27.65■■■□□ 2.02
PDGFA-204ENST00000405692 SCN11AQ9UI33 1791 aa27.64■■■□□ 2.02
PDGFA-204ENST00000405692 LOC102724428A0A0B4J2F2 783 aa27.64■■■□□ 2.02
PDGFA-204ENST00000405692 KCNQ4P56696 695 aa27.64■■■□□ 2.02
PDGFA-204ENST00000405692 SIK1P57059 783 aa27.64■■■□□ 2.02
PDGFA-204ENST00000405692 AKT1S1Q96B36 256 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms