RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 MEGF6O75095 1541 aa25.23■■□□□ 1.63
HDAC11-204ENST00000404040 PNPLA7Q6ZV29 1317 aa25.23■■□□□ 1.63
HDAC11-204ENST00000404040 SLC16A10Q8TF71 515 aa25.23■■□□□ 1.63
HDAC11-204ENST00000404040 MAP3K19Q56UN5 1328 aa25.22■■□□□ 1.63
HDAC11-204ENST00000404040 C5P01031 1676 aa25.22■■□□□ 1.63
HDAC11-204ENST00000404040 KIF20BQ96Q89 1820 aa25.21■■□□□ 1.63
HDAC11-204ENST00000404040 TAF1LQ8IZX4 1826 aa25.21■■□□□ 1.63
HDAC11-204ENST00000404040 HOXC9P31274 260 aa25.19■■□□□ 1.62
HDAC11-204ENST00000404040 RTL1A6NKG5 1358 aa25.18■■□□□ 1.62
HDAC11-204ENST00000404040 POLD1P28340 1107 aa25.18■■□□□ 1.62
HDAC11-204ENST00000404040 PRIM1P49642 420 aaKnown RBP25.18■■□□□ 1.62
HDAC11-204ENST00000404040 SYTL4Q96C24 671 aaPredicted RBP25.18■■□□□ 1.62
HDAC11-204ENST00000404040 COG3Q96JB2 828 aa25.18■■□□□ 1.62
HDAC11-204ENST00000404040 TESK2Q96S53 571 aa25.18■■□□□ 1.62
HDAC11-204ENST00000404040 KCNQ4P56696 695 aa25.17■■□□□ 1.62
HDAC11-204ENST00000404040 GPR162Q16538 588 aa25.17■■□□□ 1.62
HDAC11-204ENST00000404040 TFCP2L1Q9NZI6 479 aa25.17■■□□□ 1.62
HDAC11-204ENST00000404040 KLHL34Q8N239 644 aa25.16■■□□□ 1.62
HDAC11-204ENST00000404040 AMPHP49418 695 aa25.15■■□□□ 1.62
HDAC11-204ENST00000404040 ITGB4P16144 1822 aa25.14■■□□□ 1.62
HDAC11-204ENST00000404040 ZCRB1Q8TBF4 217 aaKnown RBP25.14■■□□□ 1.62
HDAC11-204ENST00000404040 C1QTNF8P60827 252 aa25.13■■□□□ 1.61
HDAC11-204ENST00000404040 TOGARAM1Q9Y4F4 1720 aa25.12■■□□□ 1.61
HDAC11-204ENST00000404040 FBLN1P23142 703 aa25.12■■□□□ 1.61
HDAC11-204ENST00000404040 SENP3-EIF4A1A0A087X0R7 540 aa25.11■■□□□ 1.61
HDAC11-204ENST00000404040 ST20-MTHFSA0A0A6YYL1 179 aa25.11■■□□□ 1.61
HDAC11-204ENST00000404040 CCNL1Q9UK58 526 aaPredicted RBP25.11■■□□□ 1.61
HDAC11-204ENST00000404040 PKD1L3Q7Z443 1732 aa25.1■■□□□ 1.61
HDAC11-204ENST00000404040 NLGN2Q8NFZ4 835 aa25.1■■□□□ 1.61
HDAC11-204ENST00000404040 SMG6Q86US8 1419 aaKnown RBP25.1■■□□□ 1.61
HDAC11-204ENST00000404040 USP47Q96K76 1375 aa25.09■■□□□ 1.61
HDAC11-204ENST00000404040 CGNL1Q0VF96 1302 aa25.09■■□□□ 1.61
HDAC11-204ENST00000404040 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.61
HDAC11-204ENST00000404040 RRS1Q15050 365 aaKnown RBP25.07■■□□□ 1.6
HDAC11-204ENST00000404040 NBPF6Q5VWK0 638 aa25.07■■□□□ 1.6
HDAC11-204ENST00000404040 NBPF4Q96M43 638 aa25.07■■□□□ 1.6
HDAC11-204ENST00000404040 UBR3Q6ZT12 1888 aa25.06■■□□□ 1.6
HDAC11-204ENST00000404040 ANKRD26Q9UPS8 1709 aa25.06■■□□□ 1.6
HDAC11-204ENST00000404040 SLC24A1O60721 1099 aa25.06■■□□□ 1.6
HDAC11-204ENST00000404040 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
HDAC11-204ENST00000404040 USHBP1Q8N6Y0 703 aa25.05■■□□□ 1.6
HDAC11-204ENST00000404040 COL23A1Q86Y22 540 aaPredicted RBP25.04■■□□□ 1.6
HDAC11-204ENST00000404040 GIGYF1O75420 1035 aaPredicted RBP25.03■■□□□ 1.6
HDAC11-204ENST00000404040 RAPGEF4Q8WZA2 1011 aa25.03■■□□□ 1.6
HDAC11-204ENST00000404040 FYB1O15117 783 aa25.02■■□□□ 1.6
HDAC11-204ENST00000404040 MSH5O43196 834 aa25.02■■□□□ 1.6
HDAC11-204ENST00000404040 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
HDAC11-204ENST00000404040 PCDH11XQ9BZA7 1347 aa25.02■■□□□ 1.6
HDAC11-204ENST00000404040 PCDH11YQ9BZA8 1340 aa25.02■■□□□ 1.6
HDAC11-204ENST00000404040 INSRP06213 1382 aa25.02■■□□□ 1.6
HDAC11-204ENST00000404040 MAP2P11137 1827 aaKnown RBP25.01■■□□□ 1.59
HDAC11-204ENST00000404040 YBX3P16989 372 aaKnown RBP eCLIP25.01■■□□□ 1.59
HDAC11-204ENST00000404040 FLT4P35916 1363 aa25■■□□□ 1.59
HDAC11-204ENST00000404040 KIF24Q5T7B8 1368 aa25■■□□□ 1.59
HDAC11-204ENST00000404040 PALLDQ8WX93 1383 aa25■■□□□ 1.59
HDAC11-204ENST00000404040 TATP17735 454 aaPredicted RBP24.99■■□□□ 1.59
HDAC11-204ENST00000404040 MSL1Q68DK7 614 aa24.99■■□□□ 1.59
HDAC11-204ENST00000404040 GRIN3BO60391 1043 aa24.98■■□□□ 1.59
HDAC11-204ENST00000404040 CEP350Q5VT06 3117 aa24.98■■□□□ 1.59
HDAC11-204ENST00000404040 HSP90AB2PQ58FF8 381 aa24.96■■□□□ 1.59
HDAC11-204ENST00000404040 NCAPD2Q15021 1401 aa24.95■■□□□ 1.59
HDAC11-204ENST00000404040 TMF1P82094 1093 aa24.95■■□□□ 1.58
HDAC11-204ENST00000404040 CYP27B1O15528 508 aa24.93■■□□□ 1.58
HDAC11-204ENST00000404040 HMGB2P26583 209 aaKnown RBP24.93■■□□□ 1.58
HDAC11-204ENST00000404040 FLAD1Q8NFF5 587 aa24.93■■□□□ 1.58
HDAC11-204ENST00000404040 ATP10DQ9P241 1426 aa24.93■■□□□ 1.58
HDAC11-204ENST00000404040 MPRIPQ6WCQ1 1025 aa24.92■■□□□ 1.58
HDAC11-204ENST00000404040 CD2APQ9Y5K6 639 aa24.92■■□□□ 1.58
HDAC11-204ENST00000404040 NSD3Q9BZ95 1437 aa24.9■■□□□ 1.58
HDAC11-204ENST00000404040 ADCY9O60503 1353 aa24.89■■□□□ 1.57
HDAC11-204ENST00000404040 SMARCC1Q92922 1105 aaPredicted RBP24.88■■□□□ 1.57
HDAC11-204ENST00000404040 KIF13BQ9NQT8 1826 aa24.88■■□□□ 1.57
HDAC11-204ENST00000404040 CDCA8Q53HL2 280 aa24.87■■□□□ 1.57
HDAC11-204ENST00000404040 AMIGO3Q86WK7 504 aa24.87■■□□□ 1.57
HDAC11-204ENST00000404040 AK7Q96M32 723 aa24.87■■□□□ 1.57
HDAC11-204ENST00000404040 EMILIN1Q9Y6C2 1016 aa24.87■■□□□ 1.57
HDAC11-204ENST00000404040 PIGBQ92521 554 aa24.84■■□□□ 1.57
HDAC11-204ENST00000404040 CARD14Q9BXL6 1004 aa24.84■■□□□ 1.57
HDAC11-204ENST00000404040 KIAA1551Q9HCM1 1747 aa24.83■■□□□ 1.57
HDAC11-204ENST00000404040 CICQ96RK0 1608 aaPredicted RBP24.83■■□□□ 1.57
HDAC11-204ENST00000404040 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.57
HDAC11-204ENST00000404040 ZNF831Q5JPB2 1677 aa24.82■■□□□ 1.56
HDAC11-204ENST00000404040 PHF14O94880 888 aa24.82■■□□□ 1.56
HDAC11-204ENST00000404040 COL5A3P25940 1745 aaPredicted RBP24.81■■□□□ 1.56
HDAC11-204ENST00000404040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.81■■□□□ 1.56
HDAC11-204ENST00000404040 IGSF1Q8N6C5 1336 aa24.81■■□□□ 1.56
HDAC11-204ENST00000404040 SSFA2P28290 1259 aa24.8■■□□□ 1.56
HDAC11-204ENST00000404040 ZEB1P37275 1124 aaPredicted RBP24.8■■□□□ 1.56
HDAC11-204ENST00000404040 SPG7Q9UQ90 795 aa24.8■■□□□ 1.56
HDAC11-204ENST00000404040 N4BP2Q86UW6 1770 aaPredicted RBP24.8■■□□□ 1.56
HDAC11-204ENST00000404040 LOC102724428A0A0B4J2F2 783 aa24.79■■□□□ 1.56
HDAC11-204ENST00000404040 SIK1P57059 783 aa24.79■■□□□ 1.56
HDAC11-204ENST00000404040 SMIM5Q71RC9 77 aa24.79■■□□□ 1.56
HDAC11-204ENST00000404040 LINC00116Q8NCU8 138 aa24.79■■□□□ 1.56
HDAC11-204ENST00000404040 GPBP1L1Q9HC44 474 aaPredicted RBP24.79■■□□□ 1.56
HDAC11-204ENST00000404040 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
HDAC11-204ENST00000404040 BRCA1P38398 1863 aaKnown RBP24.77■■□□□ 1.56
HDAC11-204ENST00000404040 PPM1GO15355 546 aaPredicted RBP24.77■■□□□ 1.56
HDAC11-204ENST00000404040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.77■■□□□ 1.56
HDAC11-204ENST00000404040 C4AP0C0L4 1744 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms