RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 MRPL42Q9Y6G3 142 aaKnown RBP7.06□□□□□ -1.28
CNGA1-202ENST00000402813 PALM3A6NDB9 673 aaPredicted RBP7.05□□□□□ -1.28
CNGA1-202ENST00000402813 MRPL58Q14197 206 aaKnown RBP7.05□□□□□ -1.28
CNGA1-202ENST00000402813 CDC37Q16543 378 aaPredicted RBP7.05□□□□□ -1.28
CNGA1-202ENST00000402813 METTL16Q86W50 562 aaKnown RBP7.05□□□□□ -1.28
CNGA1-202ENST00000402813 ZNF513Q8N8E2 541 aaPredicted RBP7.05□□□□□ -1.28
CNGA1-202ENST00000402813 NOL7Q9UMY1 257 aaKnown RBP7.05□□□□□ -1.28
CNGA1-202ENST00000402813 ENPP3O14638 875 aa7.05□□□□□ -1.28
CNGA1-202ENST00000402813 FAM161AQ3B820 660 aa7.05□□□□□ -1.28
CNGA1-202ENST00000402813 PPM1EQ8WY54 764 aa7.05□□□□□ -1.28
CNGA1-202ENST00000402813 APBA2Q99767 749 aa7.05□□□□□ -1.28
CNGA1-202ENST00000402813 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
CNGA1-202ENST00000402813 HMGXB3Q12766 1538 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 UNC13AQ9UPW8 1703 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 CT47B1P0C2W7 299 aaPredicted RBP7.04□□□□□ -1.28
CNGA1-202ENST00000402813 SSR1P43307 286 aaKnown RBP7.04□□□□□ -1.28
CNGA1-202ENST00000402813 PSMC1P62191 440 aaKnown RBP7.04□□□□□ -1.28
CNGA1-202ENST00000402813 L1TD1Q5T7N2 865 aaKnown RBP7.04□□□□□ -1.28
CNGA1-202ENST00000402813 SOGA3Q5TF21 947 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 CEP89Q96ST8 783 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 ZHX3Q9H4I2 956 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 RAI14Q9P0K7 980 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 AMPD3Q01432 767 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 SAMD3Q8N6K7 520 aa7.04□□□□□ -1.28
CNGA1-202ENST00000402813 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 LMOD1P29536 600 aaPredicted RBP7.03□□□□□ -1.28
CNGA1-202ENST00000402813 GNALP38405 381 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 C1QTNF12Q5T7M4 302 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 TSC1Q92574 1164 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 FRMD6Q96NE9 622 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 SEZ6LQ9BYH1 1024 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 MKRN1Q9UHC7 482 aaKnown RBP7.03□□□□□ -1.28
CNGA1-202ENST00000402813 TMEM259Q4ZIN3 620 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 DCAF8Q5TAQ9 597 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 TOP2BQ02880 1626 aa7.03□□□□□ -1.28
CNGA1-202ENST00000402813 MFRPQ9BY79 579 aa7.02□□□□□ -1.28
CNGA1-202ENST00000402813 TMEM51Q9NW97 253 aa7.02□□□□□ -1.28
CNGA1-202ENST00000402813 HIP1RO75146 1068 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 FLT3P36888 993 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 ODR4Q5SWX8 454 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
CNGA1-202ENST00000402813 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 SMAPO00193 183 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 PPP1R12AO14974 1030 aaPredicted RBP7.02□□□□□ -1.29
CNGA1-202ENST00000402813 PPP1R37O75864 691 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 MAP2K1Q02750 393 aaPredicted RBP7.02□□□□□ -1.29
CNGA1-202ENST00000402813 NGDNQ8NEJ9 315 aaKnown RBP7.02□□□□□ -1.29
CNGA1-202ENST00000402813 LRRC27Q9C0I9 530 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 TGIF2Q9GZN2 237 aa7.02□□□□□ -1.29
CNGA1-202ENST00000402813 A6NJY4 79 aa7.01□□□□□ -1.29
CNGA1-202ENST00000402813 ANP32AP39687 249 aaKnown RBP7.01□□□□□ -1.29
CNGA1-202ENST00000402813 TERF1P54274 439 aa7.01□□□□□ -1.29
CNGA1-202ENST00000402813 ENOX2Q16206 610 aaKnown RBP7.01□□□□□ -1.29
CNGA1-202ENST00000402813 CEP162Q5TB80 1403 aa7.01□□□□□ -1.29
CNGA1-202ENST00000402813 FBXO31Q5XUX0 539 aaPredicted RBP7.01□□□□□ -1.29
CNGA1-202ENST00000402813 TTC14Q96N46 770 aa7.01□□□□□ -1.29
CNGA1-202ENST00000402813 LARP6Q9BRS8 491 aaKnown RBP7.01□□□□□ -1.29
CNGA1-202ENST00000402813 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
CNGA1-202ENST00000402813 LZTS1Q9Y250 596 aa7.01□□□□□ -1.29
CNGA1-202ENST00000402813 THRAP3Q9Y2W1 955 aaKnown RBP7.01□□□□□ -1.29
CNGA1-202ENST00000402813 PPP1R18Q6NYC8 613 aa7.01□□□□□ -1.29
CNGA1-202ENST00000402813 CC2D1AQ6P1N0 951 aaPredicted RBP7.01□□□□□ -1.29
CNGA1-202ENST00000402813 CCDC88BA6NC98 1476 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 IGHDP01880 384 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 XRCC5P13010 732 aaKnown RBP7□□□□□ -1.29
CNGA1-202ENST00000402813 ELOAQ14241 798 aaKnown RBP7□□□□□ -1.29
CNGA1-202ENST00000402813 RGL3Q3MIN7 710 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 LARP1BQ659C4 914 aaKnown RBP7□□□□□ -1.29
CNGA1-202ENST00000402813 ARPC5LQ9BPX5 153 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 IER2Q9BTL4 223 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 ODF2LQ9ULJ1 636 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 PRKAB1Q9Y478 270 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7□□□□□ -1.29
CNGA1-202ENST00000402813 FOSP01100 380 aaPredicted RBP7□□□□□ -1.29
CNGA1-202ENST00000402813 TMEM95Q3KNT9 176 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 ANKRD13BQ86YJ7 626 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 LDHAL6BQ9BYZ2 381 aaPredicted RBP7□□□□□ -1.29
CNGA1-202ENST00000402813 POLR3EQ9NVU0 708 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 ZNF69Q9UC07 566 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 VPS8Q8N3P4 1428 aa7□□□□□ -1.29
CNGA1-202ENST00000402813 CCDC163A0A0D9SF12 145 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 KIF3BO15066 747 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 USP5P45974 858 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 RAPGEF1Q13905 1077 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 SIM2Q14190 667 aaPredicted RBP6.99□□□□□ -1.29
CNGA1-202ENST00000402813 NFE2L2Q16236 605 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 ALDH1L2Q3SY69 923 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 CCDC92Q53HC0 331 aaPredicted RBP6.99□□□□□ -1.29
CNGA1-202ENST00000402813 CAPN10Q9HC96 672 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 ACAD8Q9UKU7 415 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 GNPATO15228 680 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 CHPFQ8IZ52 775 aa6.99□□□□□ -1.29
CNGA1-202ENST00000402813 MPHOSPH6Q99547 160 aaKnown RBP6.99□□□□□ -1.29
CNGA1-202ENST00000402813 ATP1B4Q9UN42 357 aaPredicted RBP6.99□□□□□ -1.29
CNGA1-202ENST00000402813 PLIN1O60240 522 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 HMMRO75330 724 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 PSMD2Q13200 908 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 COL19A1Q14993 1142 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 VPS37AQ8NEZ2 397 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 PRM3Q9NNZ6 103 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms