RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 FLT4P35916 1363 aa11.78□□□□□ -0.52
CBX1-203ENST00000402583 KIF24Q5T7B8 1368 aa11.78□□□□□ -0.52
CBX1-203ENST00000402583 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
CBX1-203ENST00000402583 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
CBX1-203ENST00000402583 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.53
CBX1-203ENST00000402583 ANKLE2Q86XL3 938 aa11.76□□□□□ -0.53
CBX1-203ENST00000402583 AMPHP49418 695 aa11.75□□□□□ -0.53
CBX1-203ENST00000402583 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
CBX1-203ENST00000402583 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
CBX1-203ENST00000402583 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
CBX1-203ENST00000402583 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
CBX1-203ENST00000402583 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
CBX1-203ENST00000402583 KIAA0232Q92628 1395 aa11.74□□□□□ -0.53
CBX1-203ENST00000402583 ABCC4O15439 1325 aa11.73□□□□□ -0.53
CBX1-203ENST00000402583 KCNA6P17658 529 aa11.73□□□□□ -0.53
CBX1-203ENST00000402583 BECN1Q14457 450 aa11.73□□□□□ -0.53
CBX1-203ENST00000402583 GAS2L2Q8NHY3 880 aa11.73□□□□□ -0.53
CBX1-203ENST00000402583 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
CBX1-203ENST00000402583 GCC1Q96CN9 775 aa11.73□□□□□ -0.53
CBX1-203ENST00000402583 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
CBX1-203ENST00000402583 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
CBX1-203ENST00000402583 FMN2Q9NZ56 1722 aa11.72□□□□□ -0.53
CBX1-203ENST00000402583 CHL1O00533 1208 aa11.72□□□□□ -0.53
CBX1-203ENST00000402583 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
CBX1-203ENST00000402583 NLRP6P59044 892 aa11.72□□□□□ -0.53
CBX1-203ENST00000402583 NBR1Q14596 966 aa11.72□□□□□ -0.53
CBX1-203ENST00000402583 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
CBX1-203ENST00000402583 PEAK1Q9H792 1746 aa11.72□□□□□ -0.53
CBX1-203ENST00000402583 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
CBX1-203ENST00000402583 KDRP35968 1356 aa11.71□□□□□ -0.53
CBX1-203ENST00000402583 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
CBX1-203ENST00000402583 ZBTB7BO15156 539 aaPredicted RBP11.71□□□□□ -0.53
CBX1-203ENST00000402583 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
CBX1-203ENST00000402583 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
CBX1-203ENST00000402583 ZNF142P52746 1687 aaPredicted RBP11.71□□□□□ -0.54
CBX1-203ENST00000402583 VIRMAQ69YN4 1812 aaKnown RBP11.7□□□□□ -0.54
CBX1-203ENST00000402583 PTPRCP08575 1304 aa11.7□□□□□ -0.54
CBX1-203ENST00000402583 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
CBX1-203ENST00000402583 SOX12O15370 315 aa11.7□□□□□ -0.54
CBX1-203ENST00000402583 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
CBX1-203ENST00000402583 NUCB1Q02818 461 aa11.7□□□□□ -0.54
CBX1-203ENST00000402583 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
CBX1-203ENST00000402583 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
CBX1-203ENST00000402583 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
CBX1-203ENST00000402583 DCTN1Q14203 1278 aa11.69□□□□□ -0.54
CBX1-203ENST00000402583 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
CBX1-203ENST00000402583 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
CBX1-203ENST00000402583 MCM10Q7L590 875 aa11.68□□□□□ -0.54
CBX1-203ENST00000402583 CHD1LQ86WJ1 897 aa11.68□□□□□ -0.54
CBX1-203ENST00000402583 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
CBX1-203ENST00000402583 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
CBX1-203ENST00000402583 CRB1P82279 1406 aa11.68□□□□□ -0.54
CBX1-203ENST00000402583 HOXC9P31274 260 aa11.67□□□□□ -0.54
CBX1-203ENST00000402583 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
CBX1-203ENST00000402583 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
CBX1-203ENST00000402583 EYA1Q99502 592 aa11.67□□□□□ -0.54
CBX1-203ENST00000402583 ADGRL3Q9HAR2 1447 aa11.67□□□□□ -0.54
CBX1-203ENST00000402583 DLG5Q8TDM6 1919 aa11.66□□□□□ -0.54
CBX1-203ENST00000402583 USP19O94966 1318 aa11.66□□□□□ -0.54
CBX1-203ENST00000402583 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
CBX1-203ENST00000402583 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
CBX1-203ENST00000402583 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
CBX1-203ENST00000402583 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.54
CBX1-203ENST00000402583 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
CBX1-203ENST00000402583 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
CBX1-203ENST00000402583 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.54
CBX1-203ENST00000402583 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
CBX1-203ENST00000402583 ADAMTSL3P82987 1691 aa11.65□□□□□ -0.55
CBX1-203ENST00000402583 SEC24BO95487 1268 aa11.64□□□□□ -0.55
CBX1-203ENST00000402583 PSME1Q06323 249 aa11.64□□□□□ -0.55
CBX1-203ENST00000402583 ANKRD45Q5TZF3 282 aa11.64□□□□□ -0.55
CBX1-203ENST00000402583 RPAP2Q8IXW5 612 aaPredicted RBP11.64□□□□□ -0.55
CBX1-203ENST00000402583 STK31Q9BXU1 1019 aa11.64□□□□□ -0.55
CBX1-203ENST00000402583 CHD2O14647 1828 aaKnown RBP11.64□□□□□ -0.55
CBX1-203ENST00000402583 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
CBX1-203ENST00000402583 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
CBX1-203ENST00000402583 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
CBX1-203ENST00000402583 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
CBX1-203ENST00000402583 MAP3K5Q99683 1374 aa11.63□□□□□ -0.55
CBX1-203ENST00000402583 DEKP35659 375 aaKnown RBP11.62□□□□□ -0.55
CBX1-203ENST00000402583 IP6K1Q92551 441 aa11.62□□□□□ -0.55
CBX1-203ENST00000402583 C22orf23Q9BZE7 217 aa11.62□□□□□ -0.55
CBX1-203ENST00000402583 RGPD8O14715 1765 aaPredicted RBP11.62□□□□□ -0.55
CBX1-203ENST00000402583 HMMRO75330 724 aa11.61□□□□□ -0.55
CBX1-203ENST00000402583 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
CBX1-203ENST00000402583 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
CBX1-203ENST00000402583 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
CBX1-203ENST00000402583 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
CBX1-203ENST00000402583 NUTM2GQ5VZR2 741 aa11.61□□□□□ -0.55
CBX1-203ENST00000402583 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
CBX1-203ENST00000402583 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
CBX1-203ENST00000402583 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
CBX1-203ENST00000402583 FOXO3O43524 673 aa11.6□□□□□ -0.55
CBX1-203ENST00000402583 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
CBX1-203ENST00000402583 TAF7Q15545 349 aaPredicted RBP11.6□□□□□ -0.55
CBX1-203ENST00000402583 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
CBX1-203ENST00000402583 RGS12O14924 1447 aa11.6□□□□□ -0.55
CBX1-203ENST00000402583 NWD1Q149M9 1564 aa11.59□□□□□ -0.55
CBX1-203ENST00000402583 NUBP1P53384 320 aa11.59□□□□□ -0.55
CBX1-203ENST00000402583 SIRT2Q8IXJ6 389 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms