RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 DNAAF2Q9NVR5 837 aaKnown RBP7.08□□□□□ -1.28
C1GALT1-202ENST00000402468 MAP4K5Q9Y4K4 846 aa7.08□□□□□ -1.28
C1GALT1-202ENST00000402468 TMEM88BA6NKF7 163 aa7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 ESPNB1AK53 854 aa7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 GDF9O60383 454 aa7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 PSME1Q06323 249 aa7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 CRTC2Q53ET0 693 aaPredicted RBP7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 LARGE2Q8N3Y3 721 aa7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 CCDC85AQ96PX6 553 aaPredicted RBP7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 KCTD15Q96SI1 283 aaPredicted RBP7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 ZMIZ1Q9ULJ6 1067 aa7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 PCDHB11Q9Y5F2 797 aa7.07□□□□□ -1.28
C1GALT1-202ENST00000402468 TNFRSF10AO00220 468 aa7.06□□□□□ -1.28
C1GALT1-202ENST00000402468 GTF2IP78347 998 aa7.06□□□□□ -1.28
C1GALT1-202ENST00000402468 TMEM164Q5U3C3 297 aa7.06□□□□□ -1.28
C1GALT1-202ENST00000402468 ZNF594Q96JF6 807 aaPredicted RBP7.06□□□□□ -1.28
C1GALT1-202ENST00000402468 DHX9Q08211 1270 aaKnown RBP7.05□□□□□ -1.28
C1GALT1-202ENST00000402468 ARID5BQ14865 1188 aa7.05□□□□□ -1.28
C1GALT1-202ENST00000402468 SWI5Q1ZZU3 235 aa7.05□□□□□ -1.28
C1GALT1-202ENST00000402468 PLA2G2CQ5R387 149 aa7.05□□□□□ -1.28
C1GALT1-202ENST00000402468 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
C1GALT1-202ENST00000402468 TMCO4Q5TGY1 634 aa7.05□□□□□ -1.28
C1GALT1-202ENST00000402468 STK32AQ8WU08 396 aa7.05□□□□□ -1.28
C1GALT1-202ENST00000402468 ST8SIA5O15466 376 aa7.04□□□□□ -1.28
C1GALT1-202ENST00000402468 RAB15P59190 212 aa7.04□□□□□ -1.28
C1GALT1-202ENST00000402468 DPYDQ12882 1025 aa7.04□□□□□ -1.28
C1GALT1-202ENST00000402468 TREML4Q6UXN2 200 aa7.04□□□□□ -1.28
C1GALT1-202ENST00000402468 SIX5Q8N196 739 aa7.04□□□□□ -1.28
C1GALT1-202ENST00000402468 GZF1Q9H116 711 aaPredicted RBP7.04□□□□□ -1.28
C1GALT1-202ENST00000402468 AAASQ9NRG9 546 aa7.04□□□□□ -1.28
C1GALT1-202ENST00000402468 SEC13P55735 322 aa7.03□□□□□ -1.28
C1GALT1-202ENST00000402468 CLDN10P78369 228 aa7.03□□□□□ -1.28
C1GALT1-202ENST00000402468 SKOR1P84550 965 aa7.03□□□□□ -1.28
C1GALT1-202ENST00000402468 INTS6LQ5JSJ4 861 aaKnown RBP7.03□□□□□ -1.28
C1GALT1-202ENST00000402468 RC3H1Q5TC82 1133 aaKnown RBP7.03□□□□□ -1.28
C1GALT1-202ENST00000402468 CCER1Q8TC90 406 aaPredicted RBP7.03□□□□□ -1.28
C1GALT1-202ENST00000402468 MTMR7Q9Y216 660 aa7.03□□□□□ -1.28
C1GALT1-202ENST00000402468 CARNS1A5YM72 827 aa7.02□□□□□ -1.29
C1GALT1-202ENST00000402468 TSGA10IPQ3SY00 556 aa7.02□□□□□ -1.29
C1GALT1-202ENST00000402468 CCDC102BQ68D86 513 aa7.02□□□□□ -1.29
C1GALT1-202ENST00000402468 MPNDQ8N594 471 aa7.02□□□□□ -1.29
C1GALT1-202ENST00000402468 CLP1Q92989 425 aaKnown RBP7.02□□□□□ -1.29
C1GALT1-202ENST00000402468 FSHRP23945 695 aa7.01□□□□□ -1.29
C1GALT1-202ENST00000402468 TPCN2Q8NHX9 752 aa7.01□□□□□ -1.29
C1GALT1-202ENST00000402468 CDK15Q96Q40 435 aa7.01□□□□□ -1.29
C1GALT1-202ENST00000402468 ERVH48-1M5A8F1 160 aa7□□□□□ -1.29
C1GALT1-202ENST00000402468 ARID4AP29374 1257 aaPredicted RBP7□□□□□ -1.29
C1GALT1-202ENST00000402468 NR5A1Q13285 461 aa7□□□□□ -1.29
C1GALT1-202ENST00000402468 CC2D2BQ6DHV5 1058 aa7□□□□□ -1.29
C1GALT1-202ENST00000402468 IVNS1ABPQ9Y6Y0 642 aa7□□□□□ -1.29
C1GALT1-202ENST00000402468 WNT7AO00755 349 aa6.99□□□□□ -1.29
C1GALT1-202ENST00000402468 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
C1GALT1-202ENST00000402468 PKD2L1Q9P0L9 805 aa6.99□□□□□ -1.29
C1GALT1-202ENST00000402468 GNEQ9Y223 722 aaKnown RBP6.99□□□□□ -1.29
C1GALT1-202ENST00000402468 PCDHGA11Q9Y5H2 935 aa6.99□□□□□ -1.29
C1GALT1-202ENST00000402468 M0R2N6 131 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 ZBTB7BO15156 539 aaPredicted RBP6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 ADH1CP00326 375 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 SSFA2P28290 1259 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 ERVK-9P63128 1117 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 CCDC116Q8IYX3 515 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 HINFPQ9BQA5 517 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 PGPEP1Q9NXJ5 209 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
C1GALT1-202ENST00000402468 BACH1O14867 736 aa6.97□□□□□ -1.29
C1GALT1-202ENST00000402468 FOXC1Q12948 553 aa6.97□□□□□ -1.29
C1GALT1-202ENST00000402468 CYP2U1Q7Z449 544 aa6.97□□□□□ -1.29
C1GALT1-202ENST00000402468 TLL2Q9Y6L7 1015 aa6.97□□□□□ -1.29
C1GALT1-202ENST00000402468 SFI1A8K8P3 1242 aa6.96□□□□□ -1.3
C1GALT1-202ENST00000402468 FAM69CQ0P6D2 419 aa6.96□□□□□ -1.3
C1GALT1-202ENST00000402468 CRIPAKQ8N1N5 446 aa6.96□□□□□ -1.3
C1GALT1-202ENST00000402468 C1orf216Q8TAB5 229 aa6.96□□□□□ -1.3
C1GALT1-202ENST00000402468 DACH1Q9UI36 760 aa6.96□□□□□ -1.3
C1GALT1-202ENST00000402468 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
C1GALT1-202ENST00000402468 SIAH2O43255 324 aa6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 PRMT3O60678 531 aa6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 GRM5P41594 1212 aa6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 RANGAP1P46060 587 aaPredicted RBP6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 MFAP1P55081 439 aaKnown RBP6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 ESCO1Q5FWF5 840 aa6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 SND1Q7KZF4 910 aaKnown RBP eCLIP6.95□□□□□ -1.36e-8■■□□□ 11.7
C1GALT1-202ENST00000402468 MRGPRX2Q96LB1 330 aa6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 CYLDQ9NQC7 956 aa6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 WASF2Q9Y6W5 498 aa6.95□□□□□ -1.3
C1GALT1-202ENST00000402468 WFS1O76024 890 aa6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 DKK1O94907 266 aa6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 GNRH1P01148 92 aa6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 AVPP01185 164 aa6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 SCTRP47872 440 aa6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 CCDC27Q2M243 656 aa6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 PPP1R26Q5T8A7 1209 aaPredicted RBP6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 TXNDC2Q86VQ3 553 aa6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 ZNF784Q8NCA9 323 aaPredicted RBP6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 CXXC1Q9P0U4 656 aaPredicted RBP6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 GMPR2Q9P2T1 348 aaKnown RBP6.94□□□□□ -1.3
C1GALT1-202ENST00000402468 WASLO00401 505 aaPredicted RBP6.93□□□□□ -1.3
C1GALT1-202ENST00000402468 ALDH1A1P00352 501 aa6.93□□□□□ -1.3
C1GALT1-202ENST00000402468 GDF10P55107 478 aa6.93□□□□□ -1.3
C1GALT1-202ENST00000402468 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.93□□□□□ -1.3
C1GALT1-202ENST00000402468 OSBPL3Q9H4L5 887 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms