RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 USHBP1Q8N6Y0 703 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 SDF4Q9BRK5 362 aa21.16■□□□□ 0.98
SNED1-204ENST00000401884 CEBPAP49715 358 aaPredicted RBP21.16■□□□□ 0.98
SNED1-204ENST00000401884 ACEP12821 1306 aa21.16■□□□□ 0.98
SNED1-204ENST00000401884 LETM1O95202 739 aaPredicted RBP21.16■□□□□ 0.98
SNED1-204ENST00000401884 C8orf58Q8NAV2 365 aa21.16■□□□□ 0.98
SNED1-204ENST00000401884 PBRM1Q86U86 1689 aa21.16■□□□□ 0.98
SNED1-204ENST00000401884 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
SNED1-204ENST00000401884 LRRFIP2Q9Y608 721 aaKnown RBP21.16■□□□□ 0.98
SNED1-204ENST00000401884 NFXL1Q6ZNB6 911 aa21.15■□□□□ 0.98
SNED1-204ENST00000401884 JAKMIP1Q96N16 626 aaKnown RBP21.15■□□□□ 0.98
SNED1-204ENST00000401884 ZC3H6P61129 1189 aaKnown RBP21.14■□□□□ 0.97
SNED1-204ENST00000401884 LARP1BQ659C4 914 aaKnown RBP21.14■□□□□ 0.97
SNED1-204ENST00000401884 BLOC1S2Q6QNY1 142 aa21.14■□□□□ 0.97
SNED1-204ENST00000401884 ZRANB1Q9UGI0 708 aa21.14■□□□□ 0.97
SNED1-204ENST00000401884 MPNDQ8N594 471 aa21.14■□□□□ 0.97
SNED1-204ENST00000401884 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
SNED1-204ENST00000401884 STK3Q13188 491 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 TSPYL6Q8N831 410 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 TTC21BQ7Z4L5 1316 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 VAMP4O75379 141 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 SMC5Q8IY18 1101 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 ZBTB40Q9NUA8 1239 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 KDM2BQ8NHM5 1336 aa21.13■□□□□ 0.97
SNED1-204ENST00000401884 KCNH5Q8NCM2 988 aa21.12■□□□□ 0.97
SNED1-204ENST00000401884 MEIS3Q99687 375 aa21.12■□□□□ 0.97
SNED1-204ENST00000401884 AEBP1Q8IUX7 1158 aa21.12■□□□□ 0.97
SNED1-204ENST00000401884 MRPL50Q8N5N7 158 aaKnown RBP21.12■□□□□ 0.97
SNED1-204ENST00000401884 TRIM5Q9C035 493 aa21.12■□□□□ 0.97
SNED1-204ENST00000401884 A0A1W2PP64 1363 aa21.11■□□□□ 0.97
SNED1-204ENST00000401884 RAB11FIP3O75154 756 aa21.11■□□□□ 0.97
SNED1-204ENST00000401884 KRT85P78386 507 aa21.11■□□□□ 0.97
SNED1-204ENST00000401884 PDRG1Q9NUG6 133 aa21.11■□□□□ 0.97
SNED1-204ENST00000401884 ABCC10Q5T3U5 1492 aa21.11■□□□□ 0.97
SNED1-204ENST00000401884 ANKRD1Q15327 319 aa21.11■□□□□ 0.97
SNED1-204ENST00000401884 TTC22Q5TAA0 569 aa21.11■□□□□ 0.97
SNED1-204ENST00000401884 CABP4P57796 275 aa21.1■□□□□ 0.97
SNED1-204ENST00000401884 INSRP06213 1382 aa21.1■□□□□ 0.97
SNED1-204ENST00000401884 TPD52L1Q16890 204 aaPredicted RBP21.1■□□□□ 0.97
SNED1-204ENST00000401884 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
SNED1-204ENST00000401884 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
SNED1-204ENST00000401884 CEBPZQ03701 1054 aaKnown RBP21.1■□□□□ 0.97
SNED1-204ENST00000401884 PHF8Q9UPP1 1060 aa21.1■□□□□ 0.97
SNED1-204ENST00000401884 ABCC2Q92887 1545 aa21.1■□□□□ 0.97
SNED1-204ENST00000401884 SYCE3A1L190 88 aa21.09■□□□□ 0.97
SNED1-204ENST00000401884 POGZQ7Z3K3 1410 aa21.09■□□□□ 0.97
SNED1-204ENST00000401884 RBM33Q96EV2 1170 aaKnown RBP21.09■□□□□ 0.97
SNED1-204ENST00000401884 MBD5Q9P267 1494 aa21.09■□□□□ 0.97
SNED1-204ENST00000401884 PES1O00541 588 aaKnown RBP21.09■□□□□ 0.97
SNED1-204ENST00000401884 TSHZ3Q63HK5 1081 aa21.09■□□□□ 0.97
SNED1-204ENST00000401884 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
SNED1-204ENST00000401884 CASTP20810 708 aaKnown RBP21.08■□□□□ 0.97
SNED1-204ENST00000401884 ZMYM4Q5VZL5 1548 aa21.08■□□□□ 0.97
SNED1-204ENST00000401884 KINO60870 393 aaKnown RBP21.08■□□□□ 0.97
SNED1-204ENST00000401884 BLMP54132 1417 aaPredicted RBP21.08■□□□□ 0.97
SNED1-204ENST00000401884 FOXO3O43524 673 aa21.08■□□□□ 0.96
SNED1-204ENST00000401884 MPRIPQ6WCQ1 1025 aa21.08■□□□□ 0.96
SNED1-204ENST00000401884 ZSCAN31Q96LW9 406 aaPredicted RBP21.08■□□□□ 0.96
SNED1-204ENST00000401884 VPS37DQ86XT2 251 aa21.08■□□□□ 0.96
SNED1-204ENST00000401884 ANKRD44Q8N8A2 993 aa21.08■□□□□ 0.96
SNED1-204ENST00000401884 SDSP20132 328 aa21.07■□□□□ 0.96
SNED1-204ENST00000401884 SAFBQ15424 915 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNED1-204ENST00000401884 CCDC192P0DO97 292 aa21.06■□□□□ 0.96
SNED1-204ENST00000401884 ERICH2A1L162 156 aa21.06■□□□□ 0.96
SNED1-204ENST00000401884 EIF4A2Q14240 407 aaKnown RBP21.06■□□□□ 0.96
SNED1-204ENST00000401884 HOMER1Q86YM7 354 aa21.06■□□□□ 0.96
SNED1-204ENST00000401884 BAG4O95429 457 aaKnown RBP21.05■□□□□ 0.96
SNED1-204ENST00000401884 TPM3P06753 285 aa21.05■□□□□ 0.96
SNED1-204ENST00000401884 DDX54Q8TDD1 881 aaKnown RBP21.05■□□□□ 0.96
SNED1-204ENST00000401884 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
SNED1-204ENST00000401884 STRN4Q9NRL3 753 aa21.05■□□□□ 0.96
SNED1-204ENST00000401884 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
SNED1-204ENST00000401884 DBF4Q9UBU7 674 aaPredicted RBP21.05■□□□□ 0.96
SNED1-204ENST00000401884 PRPF40BQ6NWY9 871 aaKnown RBP21.04■□□□□ 0.96
SNED1-204ENST00000401884 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
SNED1-204ENST00000401884 FERMT3Q86UX7 667 aa21.04■□□□□ 0.96
SNED1-204ENST00000401884 C16orf71Q8IYS4 520 aaPredicted RBP21.04■□□□□ 0.96
SNED1-204ENST00000401884 CCAR2Q8N163 923 aaKnown RBP21.04■□□□□ 0.96
SNED1-204ENST00000401884 CCDC158Q5M9N0 1113 aa21.04■□□□□ 0.96
SNED1-204ENST00000401884 SPC24Q8NBT2 197 aa21.04■□□□□ 0.96
SNED1-204ENST00000401884 BOLA2Q9H3K6 86 aa21.04■□□□□ 0.96
SNED1-204ENST00000401884 HOOK1Q9UJC3 728 aaKnown RBP21.04■□□□□ 0.96
SNED1-204ENST00000401884 PPIP5K1Q6PFW1 1433 aa21.04■□□□□ 0.96
SNED1-204ENST00000401884 AMOTQ4VCS5 1084 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 CCDC83Q8IWF9 413 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 NAT10Q9H0A0 1025 aaKnown RBP21.03■□□□□ 0.96
SNED1-204ENST00000401884 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 PI4KAP2A4QPH2 592 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 ZSCAN30Q86W11 494 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 PI4KAP1Q8N8J0 262 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 MAST1Q9Y2H9 1570 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 PPP1R42Q7Z4L9 355 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 LARP1Q6PKG0 1096 aaKnown RBP21.03■□□□□ 0.96
SNED1-204ENST00000401884 TNMDQ9H2S6 317 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 TBC1D2BQ9UPU7 963 aa21.03■□□□□ 0.96
SNED1-204ENST00000401884 DHX16O60231 1041 aaKnown RBP21.02■□□□□ 0.96
SNED1-204ENST00000401884 TPM2P07951 284 aa21.02■□□□□ 0.96
SNED1-204ENST00000401884 FMNL2Q96PY5 1086 aa21.02■□□□□ 0.96
SNED1-204ENST00000401884 FAM177BA6PVY3 158 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms