RNA–Protein interactions for RNA: ENST00000399613.1

PAN3-202, Transcript of poly(A) specific ribonuclease subunit PAN3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PAN3, Length 4,940 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN3-202ENST00000399613 MAP3K19Q56UN5 1328 aa7.07□□□□□ -1.28
PAN3-202ENST00000399613 ZNF827Q17R98 1081 aa7.07□□□□□ -1.28
PAN3-202ENST00000399613 FER1L6Q2WGJ9 1857 aa7.07□□□□□ -1.28
PAN3-202ENST00000399613 HOXC9P31274 260 aa7.07□□□□□ -1.28
PAN3-202ENST00000399613 KDM6AO15550 1401 aaPredicted RBP7.06□□□□□ -1.28
PAN3-202ENST00000399613 PNPLA7Q6ZV29 1317 aa7.06□□□□□ -1.28
PAN3-202ENST00000399613 CGNL1Q0VF96 1302 aa7.06□□□□□ -1.28
PAN3-202ENST00000399613 SLC12A5Q9H2X9 1139 aa7.06□□□□□ -1.28
PAN3-202ENST00000399613 TNRC6CQ9HCJ0 1690 aaKnown RBP7.06□□□□□ -1.28
PAN3-202ENST00000399613 KCNQ2O43526 872 aa7.06□□□□□ -1.28
PAN3-202ENST00000399613 USP47Q96K76 1375 aa7.06□□□□□ -1.28
PAN3-202ENST00000399613 THSD7BQ9C0I4 1608 aa7.05□□□□□ -1.28
PAN3-202ENST00000399613 TIAM2Q8IVF5 1701 aa7.05□□□□□ -1.28
PAN3-202ENST00000399613 R3HDM1Q15032 1099 aaKnown RBP7.05□□□□□ -1.28
PAN3-202ENST00000399613 AMIGO3Q86WK7 504 aa7.05□□□□□ -1.28
PAN3-202ENST00000399613 SLC15A2Q16348 729 aa7.04□□□□□ -1.28
PAN3-202ENST00000399613 NUTM2GQ5VZR2 741 aa7.04□□□□□ -1.28
PAN3-202ENST00000399613 NPC1L1Q9UHC9 1359 aa7.04□□□□□ -1.28
PAN3-202ENST00000399613 NLRP6P59044 892 aa7.04□□□□□ -1.28
PAN3-202ENST00000399613 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
PAN3-202ENST00000399613 TXNRD1Q16881 649 aa7.03□□□□□ -1.28
PAN3-202ENST00000399613 SLC27A3Q5K4L6 730 aa7.03□□□□□ -1.28
PAN3-202ENST00000399613 PSDA5PKW4 1024 aaPredicted RBP7.03□□□□□ -1.28
PAN3-202ENST00000399613 APBA3O96018 575 aa7.03□□□□□ -1.28
PAN3-202ENST00000399613 C10orf71Q711Q0 1435 aa7.03□□□□□ -1.28
PAN3-202ENST00000399613 SNED1Q8TER0 1413 aa7.03□□□□□ -1.28
PAN3-202ENST00000399613 FLT4P35916 1363 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 DDB1Q16531 1140 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 LTBP1Q14766 1721 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 ST20-MTHFSA0A0A6YYL1 179 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 IGSF1Q8N6C5 1336 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 WDR90Q96KV7 1748 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 NBPF6Q5VWK0 638 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 ANKRD24Q8TF21 1146 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 NBPF4Q96M43 638 aa7.02□□□□□ -1.29
PAN3-202ENST00000399613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.02□□□□□ -1.295e-7■■□□□ 12.6
PAN3-202ENST00000399613 SRPK2P78362 688 aaKnown RBP7.01□□□□□ -1.29
PAN3-202ENST00000399613 LRRC37AA6NMS7 1700 aa7.01□□□□□ -1.29
PAN3-202ENST00000399613 LAMB2P55268 1798 aa7.01□□□□□ -1.29
PAN3-202ENST00000399613 IL2RBP14784 551 aa7.01□□□□□ -1.29
PAN3-202ENST00000399613 PER1O15534 1290 aaPredicted RBP7.01□□□□□ -1.29
PAN3-202ENST00000399613 PXDNLA1KZ92 1463 aa7□□□□□ -1.29
PAN3-202ENST00000399613 CYP27B1O15528 508 aa7□□□□□ -1.29
PAN3-202ENST00000399613 ANKRD36CQ5JPF3 1778 aa7□□□□□ -1.29
PAN3-202ENST00000399613 SLC24A1O60721 1099 aa7□□□□□ -1.29
PAN3-202ENST00000399613 MTFR1LQ9H019 292 aa7□□□□□ -1.29
PAN3-202ENST00000399613 STRN4Q9NRL3 753 aa7□□□□□ -1.29
PAN3-202ENST00000399613 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
PAN3-202ENST00000399613 SLC4A9Q96Q91 983 aa6.99□□□□□ -1.29
PAN3-202ENST00000399613 CCDC88AQ3V6T2 1871 aa6.99□□□□□ -1.29
PAN3-202ENST00000399613 SLC16A10Q8TF71 515 aa6.98□□□□□ -1.29
PAN3-202ENST00000399613 CARD11Q9BXL7 1154 aa6.98□□□□□ -1.29
PAN3-202ENST00000399613 POLKQ9UBT6 870 aa6.98□□□□□ -1.29
PAN3-202ENST00000399613 SYT17Q9BSW7 474 aa6.97□□□□□ -1.29
PAN3-202ENST00000399613 CACNA1SQ13698 1873 aa6.97□□□□□ -1.29
PAN3-202ENST00000399613 FBLN1P23142 703 aa6.97□□□□□ -1.29
PAN3-202ENST00000399613 SPON1Q9HCB6 807 aa6.97□□□□□ -1.29
PAN3-202ENST00000399613 AMER1Q5JTC6 1135 aaPredicted RBP6.96□□□□□ -1.29
PAN3-202ENST00000399613 PDE3BQ13370 1112 aa6.96□□□□□ -1.3
PAN3-202ENST00000399613 EXOC5O00471 708 aa6.96□□□□□ -1.3
PAN3-202ENST00000399613 TOM1L2Q6ZVM7 507 aa6.96□□□□□ -1.3
PAN3-202ENST00000399613 TERF2IPQ9NYB0 399 aa6.96□□□□□ -1.3
PAN3-202ENST00000399613 PSME4Q14997 1843 aa6.96□□□□□ -1.3
PAN3-202ENST00000399613 A0A1B0GUL6 1792 aa6.95□□□□□ -1.3
PAN3-202ENST00000399613 SF3B2Q13435 895 aaKnown RBP6.95□□□□□ -1.3
PAN3-202ENST00000399613 NUP98P52948 1817 aa6.95□□□□□ -1.3
PAN3-202ENST00000399613 KCNA3P22001 575 aa6.95□□□□□ -1.3
PAN3-202ENST00000399613 EVA1CP58658 441 aa6.95□□□□□ -1.3
PAN3-202ENST00000399613 DDX60Q8IY21 1712 aaKnown RBP6.95□□□□□ -1.3
PAN3-202ENST00000399613 COL23A1Q86Y22 540 aaPredicted RBP6.95□□□□□ -1.3
PAN3-202ENST00000399613 CEMIPQ8WUJ3 1361 aa6.94□□□□□ -1.3
PAN3-202ENST00000399613 HSP90AB2PQ58FF8 381 aa6.94□□□□□ -1.3
PAN3-202ENST00000399613 CEP350Q5VT06 3117 aa6.94□□□□□ -1.3
PAN3-202ENST00000399613 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
PAN3-202ENST00000399613 PCDH11XQ9BZA7 1347 aa6.94□□□□□ -1.3
PAN3-202ENST00000399613 PCDH11YQ9BZA8 1340 aa6.94□□□□□ -1.3
PAN3-202ENST00000399613 HEG1Q9ULI3 1381 aa6.94□□□□□ -1.3
PAN3-202ENST00000399613 FHDC1Q9C0D6 1143 aaPredicted RBP6.93□□□□□ -1.3
PAN3-202ENST00000399613 CNTNAP4Q9C0A0 1308 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 PALLDQ8WX93 1383 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 IL13P35225 146 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 HDGFL2Q7Z4V5 671 aaPredicted RBP6.93□□□□□ -1.3
PAN3-202ENST00000399613 EYA1Q99502 592 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 NBPF14Q5TI25 921 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 LMOD2Q6P5Q4 547 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 ZCRB1Q8TBF4 217 aaKnown RBP6.93□□□□□ -1.3
PAN3-202ENST00000399613 PHKG2P15735 406 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 ITPK1Q13572 414 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 LINC00116Q8NCU8 138 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 PIGBQ92521 554 aa6.93□□□□□ -1.3
PAN3-202ENST00000399613 RC3H1Q5TC82 1133 aaKnown RBP6.92□□□□□ -1.3
PAN3-202ENST00000399613 EIF4A2Q14240 407 aaKnown RBP6.92□□□□□ -1.3
PAN3-202ENST00000399613 TRIM26Q12899 539 aaPredicted RBP6.92□□□□□ -1.3
PAN3-202ENST00000399613 ATG3Q9NT62 314 aa6.92□□□□□ -1.3
PAN3-202ENST00000399613 SCN4AP35499 1836 aa6.91□□□□□ -1.3
PAN3-202ENST00000399613 ZNF784Q8NCA9 323 aaPredicted RBP6.91□□□□□ -1.3
PAN3-202ENST00000399613 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
PAN3-202ENST00000399613 HAP1P54257 671 aaPredicted RBP6.91□□□□□ -1.3
PAN3-202ENST00000399613 EMILIN1Q9Y6C2 1016 aa6.91□□□□□ -1.3
PAN3-202ENST00000399613 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms