RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
SMIM11A-202ENST00000399295 IGSF1Q8N6C5 1336 aa23.59■■□□□ 1.37
SMIM11A-202ENST00000399295 EN1Q05925 392 aaPredicted RBP23.58■■□□□ 1.37
SMIM11A-202ENST00000399295 BCL11BQ9C0K0 894 aaPredicted RBP23.58■■□□□ 1.37
SMIM11A-202ENST00000399295 IL13P35225 146 aa23.57■■□□□ 1.36
SMIM11A-202ENST00000399295 ACSBG1Q96GR2 724 aa23.55■■□□□ 1.36
SMIM11A-202ENST00000399295 DIAPH1O60610 1272 aaKnown RBP23.54■■□□□ 1.36
SMIM11A-202ENST00000399295 PPP2R1AP30153 589 aa23.54■■□□□ 1.36
SMIM11A-202ENST00000399295 PTF1AQ7RTS3 328 aa23.54■■□□□ 1.36
SMIM11A-202ENST00000399295 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
SMIM11A-202ENST00000399295 KCNQ2O43526 872 aa23.53■■□□□ 1.36
SMIM11A-202ENST00000399295 PCDH11XQ9BZA7 1347 aa23.53■■□□□ 1.36
SMIM11A-202ENST00000399295 PCDH11YQ9BZA8 1340 aa23.53■■□□□ 1.36
SMIM11A-202ENST00000399295 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
SMIM11A-202ENST00000399295 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
SMIM11A-202ENST00000399295 CAMKK2Q96RR4 588 aa23.52■■□□□ 1.36
SMIM11A-202ENST00000399295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.36
SMIM11A-202ENST00000399295 PLSCR1O15162 318 aa23.51■■□□□ 1.35
SMIM11A-202ENST00000399295 EZH2Q15910 746 aaKnown RBP23.51■■□□□ 1.35
SMIM11A-202ENST00000399295 SULT6B1Q6IMI4 303 aa23.51■■□□□ 1.35
SMIM11A-202ENST00000399295 AEBP1Q8IUX7 1158 aa23.51■■□□□ 1.35
SMIM11A-202ENST00000399295 CYP27B1O15528 508 aa23.5■■□□□ 1.35
SMIM11A-202ENST00000399295 CFAP53Q96M91 514 aa23.5■■□□□ 1.35
SMIM11A-202ENST00000399295 PLEKHG2Q9H7P9 1386 aa23.49■■□□□ 1.35
SMIM11A-202ENST00000399295 KAT6BQ8WYB5 2073 aa23.48■■□□□ 1.35
SMIM11A-202ENST00000399295 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
SMIM11A-202ENST00000399295 KDRP35968 1356 aa23.47■■□□□ 1.35
SMIM11A-202ENST00000399295 SHANK3Q9BYB0 1731 aa23.47■■□□□ 1.35
SMIM11A-202ENST00000399295 COL3A1P02461 1466 aaPredicted RBP23.46■■□□□ 1.35
SMIM11A-202ENST00000399295 PRIM1P49642 420 aaKnown RBP23.46■■□□□ 1.35
SMIM11A-202ENST00000399295 SYTL4Q96C24 671 aaPredicted RBP23.46■■□□□ 1.35
SMIM11A-202ENST00000399295 RGPD3A6NKT7 1758 aaPredicted RBP23.45■■□□□ 1.34
SMIM11A-202ENST00000399295 RGPD4Q7Z3J3 1758 aa23.45■■□□□ 1.34
SMIM11A-202ENST00000399295 U2SURPO15042 1029 aaKnown RBP23.45■■□□□ 1.34
SMIM11A-202ENST00000399295 HMOX1P09601 288 aa23.45■■□□□ 1.34
SMIM11A-202ENST00000399295 RALBP1Q15311 655 aa23.45■■□□□ 1.34
SMIM11A-202ENST00000399295 AMOTQ4VCS5 1084 aa23.45■■□□□ 1.34
SMIM11A-202ENST00000399295 IFNL2Q8IZJ0 200 aa23.44■■□□□ 1.34
SMIM11A-202ENST00000399295 PKD1L3Q7Z443 1732 aa23.44■■□□□ 1.34
SMIM11A-202ENST00000399295 PHKG2P15735 406 aa23.43■■□□□ 1.34
SMIM11A-202ENST00000399295 NKX1-1Q15270 411 aaPredicted RBP23.43■■□□□ 1.34
SMIM11A-202ENST00000399295 NHSQ6T4R5 1651 aa23.43■■□□□ 1.34
SMIM11A-202ENST00000399295 MIER1Q8N108 512 aa23.42■■□□□ 1.34
SMIM11A-202ENST00000399295 ANP32CO43423 234 aa23.41■■□□□ 1.34
SMIM11A-202ENST00000399295 NBPF14Q5TI25 921 aa23.41■■□□□ 1.34
SMIM11A-202ENST00000399295 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
SMIM11A-202ENST00000399295 ZNF530Q6P9A1 599 aaPredicted RBP23.4■■□□□ 1.34
SMIM11A-202ENST00000399295 PROM2Q8N271 834 aa23.39■■□□□ 1.33
SMIM11A-202ENST00000399295 HMGB2P26583 209 aaKnown RBP23.38■■□□□ 1.33
SMIM11A-202ENST00000399295 TXNRD1Q16881 649 aa23.38■■□□□ 1.33
SMIM11A-202ENST00000399295 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
SMIM11A-202ENST00000399295 C1orf141Q5JVX7 400 aa23.37■■□□□ 1.33
SMIM11A-202ENST00000399295 MPRIPQ6WCQ1 1025 aa23.37■■□□□ 1.33
SMIM11A-202ENST00000399295 DOT1LQ8TEK3 1739 aa23.36■■□□□ 1.33
SMIM11A-202ENST00000399295 RREB1Q92766 1687 aa23.36■■□□□ 1.33
SMIM11A-202ENST00000399295 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
SMIM11A-202ENST00000399295 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
SMIM11A-202ENST00000399295 BTAF1O14981 1849 aa23.35■■□□□ 1.33
SMIM11A-202ENST00000399295 DCAF5Q96JK2 942 aa23.34■■□□□ 1.33
SMIM11A-202ENST00000399295 MYBBP1AQ9BQG0 1328 aaKnown RBP23.33■■□□□ 1.33
SMIM11A-202ENST00000399295 POTEDQ86YR6 584 aa23.33■■□□□ 1.33
SMIM11A-202ENST00000399295 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
SMIM11A-202ENST00000399295 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
SMIM11A-202ENST00000399295 PSDA5PKW4 1024 aaPredicted RBP23.31■■□□□ 1.32
SMIM11A-202ENST00000399295 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
SMIM11A-202ENST00000399295 R3HDM1Q15032 1099 aaKnown RBP23.31■■□□□ 1.32
SMIM11A-202ENST00000399295 MTHFSDQ2M296 383 aaKnown RBP23.31■■□□□ 1.32
SMIM11A-202ENST00000399295 AKAP4Q5JQC9 854 aa23.31■■□□□ 1.32
SMIM11A-202ENST00000399295 PIGBQ92521 554 aa23.31■■□□□ 1.32
SMIM11A-202ENST00000399295 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
SMIM11A-202ENST00000399295 PRKAR2BP31323 418 aa23.3■■□□□ 1.32
SMIM11A-202ENST00000399295 FCHSD2O94868 740 aa23.29■■□□□ 1.32
SMIM11A-202ENST00000399295 NUP188Q5SRE5 1749 aa23.29■■□□□ 1.32
SMIM11A-202ENST00000399295 TOGARAM1Q9Y4F4 1720 aa23.29■■□□□ 1.32
SMIM11A-202ENST00000399295 SLC27A3Q5K4L6 730 aa23.28■■□□□ 1.32
SMIM11A-202ENST00000399295 KDM6AO15550 1401 aaPredicted RBP23.27■■□□□ 1.32
SMIM11A-202ENST00000399295 CABP4P57796 275 aa23.27■■□□□ 1.32
SMIM11A-202ENST00000399295 GAS2L2Q8NHY3 880 aa23.27■■□□□ 1.32
SMIM11A-202ENST00000399295 SMARCC1Q92922 1105 aaPredicted RBP23.27■■□□□ 1.32
SMIM11A-202ENST00000399295 LRRC4BQ9NT99 713 aa23.27■■□□□ 1.32
SMIM11A-202ENST00000399295 CCER2I3L3R5 266 aa23.26■■□□□ 1.31
SMIM11A-202ENST00000399295 PHACTR3Q96KR7 559 aa23.26■■□□□ 1.31
SMIM11A-202ENST00000399295 ANO8Q9HCE9 1232 aaPredicted RBP23.25■■□□□ 1.31
SMIM11A-202ENST00000399295 CCNL1Q9UK58 526 aaPredicted RBP23.25■■□□□ 1.31
SMIM11A-202ENST00000399295 PALLDQ8WX93 1383 aa23.25■■□□□ 1.31
SMIM11A-202ENST00000399295 KCNQ4P56696 695 aa23.24■■□□□ 1.31
SMIM11A-202ENST00000399295 STK32BQ9NY57 414 aa23.24■■□□□ 1.31
SMIM11A-202ENST00000399295 ITGB4P16144 1822 aa23.24■■□□□ 1.31
SMIM11A-202ENST00000399295 LGR6Q9HBX8 967 aa23.23■■□□□ 1.31
SMIM11A-202ENST00000399295 ASAP1Q9ULH1 1129 aa23.23■■□□□ 1.31
SMIM11A-202ENST00000399295 RNMTO43148 476 aaKnown RBP23.22■■□□□ 1.31
SMIM11A-202ENST00000399295 SLC15A2Q16348 729 aa23.22■■□□□ 1.31
SMIM11A-202ENST00000399295 NFATC2IPQ8NCF5 419 aa23.22■■□□□ 1.31
SMIM11A-202ENST00000399295 ATG3Q9NT62 314 aa23.22■■□□□ 1.31
SMIM11A-202ENST00000399295 GNAT3A8MTJ3 354 aa23.21■■□□□ 1.31
SMIM11A-202ENST00000399295 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
SMIM11A-202ENST00000399295 NEFMP07197 916 aa23.2■■□□□ 1.3
SMIM11A-202ENST00000399295 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
SMIM11A-202ENST00000399295 SLC52A2Q9HAB3 445 aa23.19■■□□□ 1.3
SMIM11A-202ENST00000399295 LY75O60449 1722 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms