RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
SMIM11A-201ENST00000399292 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
SMIM11A-201ENST00000399292 ALS2Q96Q42 1657 aa16.63■□□□□ 0.25
SMIM11A-201ENST00000399292 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
SMIM11A-201ENST00000399292 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
SMIM11A-201ENST00000399292 BRD4O60885 1362 aaPredicted RBP16.63■□□□□ 0.25
SMIM11A-201ENST00000399292 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
SMIM11A-201ENST00000399292 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
SMIM11A-201ENST00000399292 TOPAZ1Q8N9V7 1692 aa16.62■□□□□ 0.25
SMIM11A-201ENST00000399292 ZC3H6P61129 1189 aaKnown RBP16.61■□□□□ 0.25
SMIM11A-201ENST00000399292 TIMELESSQ9UNS1 1208 aa16.61■□□□□ 0.25
SMIM11A-201ENST00000399292 SBNO2Q9Y2G9 1366 aa16.61■□□□□ 0.25
SMIM11A-201ENST00000399292 PCDHGA4Q9Y5G9 962 aa16.6■□□□□ 0.25
SMIM11A-201ENST00000399292 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
SMIM11A-201ENST00000399292 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
SMIM11A-201ENST00000399292 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
SMIM11A-201ENST00000399292 KIAA0232Q92628 1395 aa16.59■□□□□ 0.25
SMIM11A-201ENST00000399292 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
SMIM11A-201ENST00000399292 ONECUT3O60422 494 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-201ENST00000399292 GCP02774 474 aa16.58■□□□□ 0.24
SMIM11A-201ENST00000399292 NUDT7P0C024 238 aa16.58■□□□□ 0.24
SMIM11A-201ENST00000399292 CHRNA2Q15822 529 aa16.58■□□□□ 0.24
SMIM11A-201ENST00000399292 USP6P35125 1406 aa16.58■□□□□ 0.24
SMIM11A-201ENST00000399292 EP400Q96L91 3159 aa16.57■□□□□ 0.24
SMIM11A-201ENST00000399292 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
SMIM11A-201ENST00000399292 TMC1Q8TDI8 760 aa16.57■□□□□ 0.24
SMIM11A-201ENST00000399292 ABCA3Q99758 1704 aa16.56■□□□□ 0.24
SMIM11A-201ENST00000399292 USP19O94966 1318 aa16.56■□□□□ 0.24
SMIM11A-201ENST00000399292 EVA1CP58658 441 aa16.56■□□□□ 0.24
SMIM11A-201ENST00000399292 PUS7Q96PZ0 661 aaKnown RBP16.56■□□□□ 0.24
SMIM11A-201ENST00000399292 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
SMIM11A-201ENST00000399292 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
SMIM11A-201ENST00000399292 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
SMIM11A-201ENST00000399292 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
SMIM11A-201ENST00000399292 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 COL14A1Q05707 1796 aaKnown RBP16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 A0A0G2JS52 829 aa16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 MYT1Q01538 1121 aa16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 TESK2Q96S53 571 aa16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 RYDENQ9NUL5 291 aaKnown RBP16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 GLI3P10071 1580 aa16.54■□□□□ 0.24
SMIM11A-201ENST00000399292 CPDO75976 1380 aa16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 TTC21AQ8NDW8 1320 aa16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 FOXK1P85037 733 aa16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 HDGFL2Q7Z4V5 671 aaPredicted RBP16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
SMIM11A-201ENST00000399292 CCDC125Q86Z20 511 aa16.52■□□□□ 0.24
SMIM11A-201ENST00000399292 CRYBG1Q9Y4K1 1723 aa16.51■□□□□ 0.23
SMIM11A-201ENST00000399292 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
SMIM11A-201ENST00000399292 TERF2IPQ9NYB0 399 aa16.51■□□□□ 0.23
SMIM11A-201ENST00000399292 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
SMIM11A-201ENST00000399292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMIM11A-201ENST00000399292 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
SMIM11A-201ENST00000399292 LHX6Q9UPM6 363 aa16.5■□□□□ 0.23
SMIM11A-201ENST00000399292 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
SMIM11A-201ENST00000399292 TMF1P82094 1093 aa16.49■□□□□ 0.23
SMIM11A-201ENST00000399292 PLPP6Q8IY26 295 aa16.49■□□□□ 0.23
SMIM11A-201ENST00000399292 USP47Q96K76 1375 aa16.49■□□□□ 0.23
SMIM11A-201ENST00000399292 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
SMIM11A-201ENST00000399292 PTCD2Q8WV60 388 aaKnown RBP16.48■□□□□ 0.23
SMIM11A-201ENST00000399292 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
SMIM11A-201ENST00000399292 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
SMIM11A-201ENST00000399292 NRAPQ86VF7 1730 aa16.47■□□□□ 0.23
SMIM11A-201ENST00000399292 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
SMIM11A-201ENST00000399292 ARHGEF25Q86VW2 580 aa16.46■□□□□ 0.23
SMIM11A-201ENST00000399292 AATKQ6ZMQ8 1374 aa16.46■□□□□ 0.23
SMIM11A-201ENST00000399292 DSG2Q14126 1118 aa16.45■□□□□ 0.22
SMIM11A-201ENST00000399292 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
SMIM11A-201ENST00000399292 CD163L1Q9NR16 1453 aa16.45■□□□□ 0.22
SMIM11A-201ENST00000399292 CAMTA1Q9Y6Y1 1673 aa16.45■□□□□ 0.22
SMIM11A-201ENST00000399292 NINLQ9Y2I6 1382 aa16.44■□□□□ 0.22
SMIM11A-201ENST00000399292 BARGINQ6ZT62 677 aa16.44■□□□□ 0.22
SMIM11A-201ENST00000399292 NME9Q86XW9 330 aa16.44■□□□□ 0.22
SMIM11A-201ENST00000399292 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
SMIM11A-201ENST00000399292 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
SMIM11A-201ENST00000399292 SLIT3O75094 1523 aa16.44■□□□□ 0.22
SMIM11A-201ENST00000399292 A0A1W2PP64 1363 aa16.43■□□□□ 0.22
SMIM11A-201ENST00000399292 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
SMIM11A-201ENST00000399292 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-201ENST00000399292 AXIN2Q9Y2T1 843 aa16.43■□□□□ 0.22
SMIM11A-201ENST00000399292 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
SMIM11A-201ENST00000399292 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-201ENST00000399292 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
SMIM11A-201ENST00000399292 PBX2P40425 430 aa16.42■□□□□ 0.22
SMIM11A-201ENST00000399292 RNF166Q96A37 237 aaPredicted RBP16.42■□□□□ 0.22
SMIM11A-201ENST00000399292 PTGER2P43116 358 aa16.41■□□□□ 0.22
SMIM11A-201ENST00000399292 LSM11P83369 360 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMIM11A-201ENST00000399292 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
SMIM11A-201ENST00000399292 BLMP54132 1417 aaPredicted RBP16.41■□□□□ 0.22
SMIM11A-201ENST00000399292 PDE3BQ13370 1112 aa16.4■□□□□ 0.22
SMIM11A-201ENST00000399292 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms