RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 UBR2Q8IWV8 1755 aa8.84□□□□□ -0.99
CX3CR1-202ENST00000399220 PPM1GO15355 546 aaPredicted RBP8.84□□□□□ -0.99
CX3CR1-202ENST00000399220 HAP1P54257 671 aaPredicted RBP8.84□□□□□ -0.99
CX3CR1-202ENST00000399220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
CX3CR1-202ENST00000399220 IBTKQ9P2D0 1353 aaPredicted RBP8.83□□□□□ -1
CX3CR1-202ENST00000399220 RBM33Q96EV2 1170 aaKnown RBP8.83□□□□□ -1
CX3CR1-202ENST00000399220 SLAIN2Q9P270 581 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 NWD2Q9ULI1 1742 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 ERBB3P21860 1342 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 KIF16BQ96L93 1317 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 MTHFSDQ2M296 383 aaKnown RBP8.83□□□□□ -1
CX3CR1-202ENST00000399220 EXOC6Q8TAG9 804 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 LRP6O75581 1613 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 GLI3P10071 1580 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 VAMP4O75379 141 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 EXOSC9Q06265 439 aaKnown RBP8.83□□□□□ -1
CX3CR1-202ENST00000399220 AMOTQ4VCS5 1084 aa8.83□□□□□ -1
CX3CR1-202ENST00000399220 BCAR3O75815 825 aa8.82□□□□□ -1
CX3CR1-202ENST00000399220 MBIPQ9NS73 344 aa8.82□□□□□ -1
CX3CR1-202ENST00000399220 PXDNLA1KZ92 1463 aa8.82□□□□□ -1
CX3CR1-202ENST00000399220 PAK3O75914 559 aaPredicted RBP8.82□□□□□ -1
CX3CR1-202ENST00000399220 CRBNQ96SW2 442 aa8.82□□□□□ -1
CX3CR1-202ENST00000399220 PHLPP1O60346 1717 aa8.81□□□□□ -1
CX3CR1-202ENST00000399220 COL5A2P05997 1499 aaPredicted RBP8.81□□□□□ -1
CX3CR1-202ENST00000399220 CICQ96RK0 1608 aaPredicted RBP8.81□□□□□ -1
CX3CR1-202ENST00000399220 HEG1Q9ULI3 1381 aa8.81□□□□□ -1
CX3CR1-202ENST00000399220 NEUROD2Q15784 382 aa8.81□□□□□ -1
CX3CR1-202ENST00000399220 ANP32EQ9BTT0 268 aa8.81□□□□□ -1
CX3CR1-202ENST00000399220 RGS12O14924 1447 aa8.81□□□□□ -1
CX3CR1-202ENST00000399220 GNAT3A8MTJ3 354 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 C20orf194Q5TEA3 1177 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 NBPF6Q5VWK0 638 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 MRPL50Q8N5N7 158 aaKnown RBP8.8□□□□□ -1
CX3CR1-202ENST00000399220 NBPF4Q96M43 638 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 IRX6P78412 446 aaPredicted RBP8.8□□□□□ -1
CX3CR1-202ENST00000399220 TSR2Q969E8 191 aaKnown RBP8.8□□□□□ -1
CX3CR1-202ENST00000399220 SENP3-EIF4A1A0A087X0R7 540 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 HOXB7P09629 217 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 AKAP4Q5JQC9 854 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 ZKSCAN2Q63HK3 967 aa8.8□□□□□ -1
CX3CR1-202ENST00000399220 ABCC4O15439 1325 aa8.79□□□□□ -1
CX3CR1-202ENST00000399220 ANKRD24Q8TF21 1146 aa8.79□□□□□ -1
CX3CR1-202ENST00000399220 SSH1Q8WYL5 1049 aa8.79□□□□□ -1
CX3CR1-202ENST00000399220 CENPQQ7L2Z9 268 aaPredicted RBP8.79□□□□□ -1
CX3CR1-202ENST00000399220 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.79□□□□□ -1
CX3CR1-202ENST00000399220 IPO8O15397 1037 aaKnown RBP8.78□□□□□ -1
CX3CR1-202ENST00000399220 PLIN1O60240 522 aa8.78□□□□□ -1
CX3CR1-202ENST00000399220 ATF7IPQ6VMQ6 1270 aa8.78□□□□□ -1
CX3CR1-202ENST00000399220 AXIN2Q9Y2T1 843 aa8.78□□□□□ -1
CX3CR1-202ENST00000399220 MVPQ14764 893 aaKnown RBP8.78□□□□□ -1
CX3CR1-202ENST00000399220 CCDC136Q96JN2 1154 aa8.78□□□□□ -1
CX3CR1-202ENST00000399220 MEGF6O75095 1541 aa8.78□□□□□ -1
CX3CR1-202ENST00000399220 NUTM2GQ5VZR2 741 aa8.78□□□□□ -1
CX3CR1-202ENST00000399220 PTPRCP08575 1304 aa8.77□□□□□ -1
CX3CR1-202ENST00000399220 C5P01031 1676 aa8.77□□□□□ -1
CX3CR1-202ENST00000399220 PLEKHO1Q53GL0 409 aaPredicted RBP8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 RTN4Q9NQC3 1192 aaKnown RBP8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 DISP2A7MBM2 1401 aa8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 TWISTNBQ3B726 338 aaPredicted RBP8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 B4GALNT3Q6L9W6 998 aa8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 IL17REQ8NFR9 667 aa8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 CHMP4AQ9BY43 222 aa8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 CHMP4BQ9H444 224 aaKnown RBP8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 TOGARAM1Q9Y4F4 1720 aa8.77□□□□□ -1.01
CX3CR1-202ENST00000399220 ZNF831Q5JPB2 1677 aa8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 FAM83GA6ND36 823 aa8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 DZIP1LQ8IYY4 767 aaKnown RBP8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 CLUAP1Q96AJ1 413 aa8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 WDR17Q8IZU2 1322 aa8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 TRIM27P14373 513 aa8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 C8orf58Q8NAV2 365 aa8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 RTF1Q92541 710 aaKnown RBP8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 TAF7Q15545 349 aaPredicted RBP8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 DDX19BQ9UMR2 479 aa8.76□□□□□ -1.01
CX3CR1-202ENST00000399220 KDM6AO15550 1401 aaPredicted RBP8.75□□□□□ -1.01
CX3CR1-202ENST00000399220 RLBP1P12271 317 aa8.75□□□□□ -1.01
CX3CR1-202ENST00000399220 SMC4Q9NTJ3 1288 aa8.75□□□□□ -1.01
CX3CR1-202ENST00000399220 HDAC1Q13547 482 aaPredicted RBP8.75□□□□□ -1.01
CX3CR1-202ENST00000399220 TSPYL6Q8N831 410 aa8.75□□□□□ -1.01
CX3CR1-202ENST00000399220 THUMPD2Q9BTF0 503 aaKnown RBP8.75□□□□□ -1.01
CX3CR1-202ENST00000399220 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 NKX1-1Q15270 411 aaPredicted RBP8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 INTS3Q68E01 1043 aaKnown RBP8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 MCM10Q7L590 875 aa8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 API5Q9BZZ5 524 aaKnown RBP8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 NOB1Q9ULX3 412 aaKnown RBP8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 TCERG1O14776 1098 aaKnown RBP8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 ZBTB40Q9NUA8 1239 aa8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 CARD10Q9BWT7 1032 aa8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
CX3CR1-202ENST00000399220 RNMTO43148 476 aaKnown RBP8.73□□□□□ -1.01
CX3CR1-202ENST00000399220 DCTN1Q14203 1278 aa8.73□□□□□ -1.01
CX3CR1-202ENST00000399220 RREB1Q92766 1687 aa8.73□□□□□ -1.01
CX3CR1-202ENST00000399220 TNS2Q63HR2 1409 aa8.73□□□□□ -1.01
CX3CR1-202ENST00000399220 ATP10DQ9P241 1426 aa8.73□□□□□ -1.01
CX3CR1-202ENST00000399220 ITGB4P16144 1822 aa8.73□□□□□ -1.01
CX3CR1-202ENST00000399220 LRRC59Q96AG4 307 aaKnown RBP8.73□□□□□ -1.01
CX3CR1-202ENST00000399220 SOX12O15370 315 aa8.72□□□□□ -1.01
CX3CR1-202ENST00000399220 PANK1Q8TE04 598 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms