RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PIK3C2BO00750 1634 aa18.25■□□□□ 0.51
CYLD-202ENST00000398568 TRPM2O94759 1503 aa18.25■□□□□ 0.51
CYLD-202ENST00000398568 IRX5P78411 483 aaPredicted RBP18.25■□□□□ 0.51
CYLD-202ENST00000398568 ANKRD7Q92527 254 aa18.25■□□□□ 0.51
CYLD-202ENST00000398568 SPTLC3Q9NUV7 552 aa18.25■□□□□ 0.51
CYLD-202ENST00000398568 SAFB2Q14151 953 aaKnown RBP eCLIP18.24■□□□□ 0.51
CYLD-202ENST00000398568 PAXIP1Q6ZW49 1069 aaPredicted RBP18.24■□□□□ 0.51
CYLD-202ENST00000398568 TMEM57Q8N5G2 664 aa18.24■□□□□ 0.51
CYLD-202ENST00000398568 USP25Q9UHP3 1055 aa18.24■□□□□ 0.51
CYLD-202ENST00000398568 NSFL1CQ9UNZ2 370 aaKnown RBP18.24■□□□□ 0.51
CYLD-202ENST00000398568 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
CYLD-202ENST00000398568 IPO8O15397 1037 aaKnown RBP18.24■□□□□ 0.51
CYLD-202ENST00000398568 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
CYLD-202ENST00000398568 TIGD1Q96MW7 591 aa18.24■□□□□ 0.51
CYLD-202ENST00000398568 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
CYLD-202ENST00000398568 ZBTB40Q9NUA8 1239 aa18.24■□□□□ 0.51
CYLD-202ENST00000398568 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
CYLD-202ENST00000398568 ADCY5O95622 1261 aa18.23■□□□□ 0.51
CYLD-202ENST00000398568 RIMS2Q9UQ26 1411 aa18.22■□□□□ 0.51
CYLD-202ENST00000398568 PLCB2Q00722 1185 aa18.22■□□□□ 0.51
CYLD-202ENST00000398568 CCDC27Q2M243 656 aa18.22■□□□□ 0.51
CYLD-202ENST00000398568 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
CYLD-202ENST00000398568 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
CYLD-202ENST00000398568 TMEM2Q9UHN6 1383 aa18.22■□□□□ 0.51
CYLD-202ENST00000398568 MROH2AA6NES4 1674 aa18.22■□□□□ 0.51
CYLD-202ENST00000398568 GCC1Q96CN9 775 aa18.22■□□□□ 0.51
CYLD-202ENST00000398568 MORC1Q86VD1 984 aa18.21■□□□□ 0.51
CYLD-202ENST00000398568 VGFO15240 615 aaPredicted RBP18.21■□□□□ 0.51
CYLD-202ENST00000398568 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
CYLD-202ENST00000398568 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
CYLD-202ENST00000398568 SSH1Q8WYL5 1049 aa18.2■□□□□ 0.5
CYLD-202ENST00000398568 MYO5BQ9ULV0 1848 aa18.2■□□□□ 0.5
CYLD-202ENST00000398568 CFAP53Q96M91 514 aa18.2■□□□□ 0.5
CYLD-202ENST00000398568 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
CYLD-202ENST00000398568 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
CYLD-202ENST00000398568 TSR2Q969E8 191 aaKnown RBP18.19■□□□□ 0.5
CYLD-202ENST00000398568 CHAMP1Q96JM3 812 aa18.19■□□□□ 0.5
CYLD-202ENST00000398568 LMTK3Q96Q04 1460 aa18.19■□□□□ 0.5
CYLD-202ENST00000398568 TPM3P06753 285 aa18.19■□□□□ 0.5
CYLD-202ENST00000398568 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
CYLD-202ENST00000398568 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
CYLD-202ENST00000398568 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
CYLD-202ENST00000398568 CTIFO43310 598 aaKnown RBP18.16■□□□□ 0.5
CYLD-202ENST00000398568 SLFN14P0C7P3 912 aa18.16■□□□□ 0.5
CYLD-202ENST00000398568 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
CYLD-202ENST00000398568 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
CYLD-202ENST00000398568 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
CYLD-202ENST00000398568 SLC20A2Q08357 652 aa18.15■□□□□ 0.5
CYLD-202ENST00000398568 IRX3P78415 501 aaPredicted RBP18.15■□□□□ 0.5
CYLD-202ENST00000398568 CHMP4AQ9BY43 222 aa18.15■□□□□ 0.5
CYLD-202ENST00000398568 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
CYLD-202ENST00000398568 KIAA1524Q8TCG1 905 aa18.14■□□□□ 0.49
CYLD-202ENST00000398568 TMEM131LA2VDJ0 1609 aa18.14■□□□□ 0.49
CYLD-202ENST00000398568 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.14■□□□□ 0.49
CYLD-202ENST00000398568 KIF1BO60333 1816 aa18.14■□□□□ 0.49
CYLD-202ENST00000398568 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.49
CYLD-202ENST00000398568 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
CYLD-202ENST00000398568 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
CYLD-202ENST00000398568 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
CYLD-202ENST00000398568 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
CYLD-202ENST00000398568 CARD14Q9BXL6 1004 aa18.13■□□□□ 0.49
CYLD-202ENST00000398568 USP26Q9BXU7 913 aa18.13■□□□□ 0.49
CYLD-202ENST00000398568 DDX41Q9UJV9 622 aaKnown RBP18.13■□□□□ 0.49
CYLD-202ENST00000398568 TERF2Q15554 542 aa18.13■□□□□ 0.49
CYLD-202ENST00000398568 NCBP1Q09161 790 aaKnown RBP18.12■□□□□ 0.49
CYLD-202ENST00000398568 KRT222Q8N1A0 295 aa18.12■□□□□ 0.49
CYLD-202ENST00000398568 SCAF11Q99590 1463 aaKnown RBP18.12■□□□□ 0.49
CYLD-202ENST00000398568 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
CYLD-202ENST00000398568 SYCP1Q15431 976 aa18.12■□□□□ 0.49
CYLD-202ENST00000398568 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
CYLD-202ENST00000398568 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
CYLD-202ENST00000398568 KDM4AO75164 1064 aa18.11■□□□□ 0.49
CYLD-202ENST00000398568 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
CYLD-202ENST00000398568 FOXD4L6Q3SYB3 417 aaPredicted RBP18.1■□□□□ 0.49
CYLD-202ENST00000398568 FOXD4L3Q6VB84 417 aaPredicted RBP18.1■□□□□ 0.49
CYLD-202ENST00000398568 MORC2Q9Y6X9 1032 aaPredicted RBP18.1■□□□□ 0.49
CYLD-202ENST00000398568 PYCARDQ9ULZ3 195 aa18.1■□□□□ 0.49
CYLD-202ENST00000398568 IQSEC2Q5JU85 1478 aa18.1■□□□□ 0.49
CYLD-202ENST00000398568 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
CYLD-202ENST00000398568 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
CYLD-202ENST00000398568 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
CYLD-202ENST00000398568 CCDC183Q5T5S1 534 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 TRIM6-TRIM34B2RNG4 842 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 SPC24Q8NBT2 197 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 TRIM34Q9BYJ4 488 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 MTHFSP49914 203 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 TPRNQ4KMQ1 711 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
CYLD-202ENST00000398568 SMTNL1A8MU46 457 aa18.08■□□□□ 0.48
CYLD-202ENST00000398568 BRD1O95696 1058 aa18.08■□□□□ 0.48
CYLD-202ENST00000398568 METP08581 1390 aa18.08■□□□□ 0.48
CYLD-202ENST00000398568 REC8O95072 547 aa18.07■□□□□ 0.48
CYLD-202ENST00000398568 CCDC112Q8NEF3 446 aa18.07■□□□□ 0.48
CYLD-202ENST00000398568 ZFYVE9O95405 1425 aa18.07■□□□□ 0.48
CYLD-202ENST00000398568 TNNT3P45378 269 aaPredicted RBP18.06■□□□□ 0.48
CYLD-202ENST00000398568 KIF18AQ8NI77 898 aa18.06■□□□□ 0.48
CYLD-202ENST00000398568 GDPD2Q9HCC8 539 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms