RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 RPGRIP1LQ68CZ1 1315 aa13.56□□□□□ -0.24
MSL3-207ENST00000398527 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
MSL3-207ENST00000398527 RINLQ6ZS11 566 aa13.56□□□□□ -0.24
MSL3-207ENST00000398527 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
MSL3-207ENST00000398527 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
MSL3-207ENST00000398527 KNSTRNQ9Y448 316 aa13.56□□□□□ -0.24
MSL3-207ENST00000398527 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
MSL3-207ENST00000398527 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
MSL3-207ENST00000398527 ONECUT3O60422 494 aaPredicted RBP13.54□□□□□ -0.24
MSL3-207ENST00000398527 RGPD1P0DJD0 1748 aa13.54□□□□□ -0.24
MSL3-207ENST00000398527 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
MSL3-207ENST00000398527 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
MSL3-207ENST00000398527 TSHZ1Q6ZSZ6 1077 aa13.53□□□□□ -0.24
MSL3-207ENST00000398527 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
MSL3-207ENST00000398527 E9PSI1 815 aa13.53□□□□□ -0.24
MSL3-207ENST00000398527 SPTY2D1Q68D10 685 aaPredicted RBP13.53□□□□□ -0.24
MSL3-207ENST00000398527 RIPOR2Q9Y4F9 1068 aa13.53□□□□□ -0.24
MSL3-207ENST00000398527 ZNF521Q96K83 1311 aa13.52□□□□□ -0.24
MSL3-207ENST00000398527 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.24
MSL3-207ENST00000398527 MS4A1P11836 297 aa13.52□□□□□ -0.24
MSL3-207ENST00000398527 VPS72Q15906 364 aa13.52□□□□□ -0.24
MSL3-207ENST00000398527 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.24
MSL3-207ENST00000398527 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
MSL3-207ENST00000398527 DNTTIP2Q5QJE6 756 aaKnown RBP13.51□□□□□ -0.25
MSL3-207ENST00000398527 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
MSL3-207ENST00000398527 HSP90AB3PQ58FF7 597 aa13.51□□□□□ -0.25
MSL3-207ENST00000398527 CASC1Q6TDU7 716 aa13.51□□□□□ -0.25
MSL3-207ENST00000398527 BRD1O95696 1058 aa13.5□□□□□ -0.25
MSL3-207ENST00000398527 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
MSL3-207ENST00000398527 NWD2Q9ULI1 1742 aa13.49□□□□□ -0.25
MSL3-207ENST00000398527 NBPF9Q3BBW0 867 aa13.49□□□□□ -0.25
MSL3-207ENST00000398527 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
MSL3-207ENST00000398527 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
MSL3-207ENST00000398527 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
MSL3-207ENST00000398527 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
MSL3-207ENST00000398527 ROBO2Q9HCK4 1378 aa13.48□□□□□ -0.25
MSL3-207ENST00000398527 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
MSL3-207ENST00000398527 TNS1Q9HBL0 1735 aaKnown RBP13.48□□□□□ -0.25
MSL3-207ENST00000398527 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
MSL3-207ENST00000398527 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
MSL3-207ENST00000398527 WDR43Q15061 677 aaKnown RBP eCLIP13.47□□□□□ -0.25
MSL3-207ENST00000398527 ADAMTS8Q9UP79 889 aa13.47□□□□□ -0.25
MSL3-207ENST00000398527 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
MSL3-207ENST00000398527 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
MSL3-207ENST00000398527 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
MSL3-207ENST00000398527 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.25
MSL3-207ENST00000398527 TRMT2AQ8IZ69 625 aaKnown RBP13.46□□□□□ -0.25
MSL3-207ENST00000398527 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
MSL3-207ENST00000398527 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
MSL3-207ENST00000398527 QRICH2Q9H0J4 1663 aa13.46□□□□□ -0.26
MSL3-207ENST00000398527 GEMIN8Q9NWZ8 242 aaKnown RBP13.45□□□□□ -0.26
MSL3-207ENST00000398527 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
MSL3-207ENST00000398527 FOXO3O43524 673 aa13.45□□□□□ -0.26
MSL3-207ENST00000398527 ARMCX6Q7L4S7 300 aa13.45□□□□□ -0.26
MSL3-207ENST00000398527 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
MSL3-207ENST00000398527 YY1AP1Q9H869 796 aa13.45□□□□□ -0.26
MSL3-207ENST00000398527 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
MSL3-207ENST00000398527 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
MSL3-207ENST00000398527 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
MSL3-207ENST00000398527 ADGRB2O60241 1585 aa13.44□□□□□ -0.26
MSL3-207ENST00000398527 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
MSL3-207ENST00000398527 EZH2Q15910 746 aaKnown RBP13.44□□□□□ -0.26
MSL3-207ENST00000398527 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
MSL3-207ENST00000398527 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
MSL3-207ENST00000398527 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
MSL3-207ENST00000398527 DMTNQ08495 405 aa13.43□□□□□ -0.26
MSL3-207ENST00000398527 TAF3Q5VWG9 929 aa13.43□□□□□ -0.26
MSL3-207ENST00000398527 ZNF784Q8NCA9 323 aaPredicted RBP13.43□□□□□ -0.26
MSL3-207ENST00000398527 IPO9Q96P70 1041 aaKnown RBP13.43□□□□□ -0.26
MSL3-207ENST00000398527 A0A0G2JS52 829 aa13.42□□□□□ -0.26
MSL3-207ENST00000398527 SLC20A2Q08357 652 aa13.42□□□□□ -0.26
MSL3-207ENST00000398527 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.42□□□□□ -0.26
MSL3-207ENST00000398527 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
MSL3-207ENST00000398527 MFAP1P55081 439 aaKnown RBP13.41□□□□□ -0.26
MSL3-207ENST00000398527 SLFN5Q08AF3 891 aa13.41□□□□□ -0.26
MSL3-207ENST00000398527 CAMKK2Q96RR4 588 aa13.41□□□□□ -0.26
MSL3-207ENST00000398527 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
MSL3-207ENST00000398527 NSD2O96028 1365 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
MSL3-207ENST00000398527 AEBP1Q8IUX7 1158 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 TERF2IPQ9NYB0 399 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
MSL3-207ENST00000398527 NRAPQ86VF7 1730 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 RREB1Q92766 1687 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 POLD1P28340 1107 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 C1QTNF8P60827 252 aa13.4□□□□□ -0.26
MSL3-207ENST00000398527 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
MSL3-207ENST00000398527 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
MSL3-207ENST00000398527 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
MSL3-207ENST00000398527 KDM2BQ8NHM5 1336 aa13.39□□□□□ -0.27
MSL3-207ENST00000398527 KIF1AQ12756 1690 aa13.39□□□□□ -0.27
MSL3-207ENST00000398527 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
MSL3-207ENST00000398527 KIF20AO95235 890 aa13.38□□□□□ -0.27
MSL3-207ENST00000398527 MAP2K1Q02750 393 aaPredicted RBP13.38□□□□□ -0.27
MSL3-207ENST00000398527 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
MSL3-207ENST00000398527 BACH2Q9BYV9 841 aa13.38□□□□□ -0.27
MSL3-207ENST00000398527 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
MSL3-207ENST00000398527 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
MSL3-207ENST00000398527 NUP188Q5SRE5 1749 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms