RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 PCDH11YQ9BZA8 1340 aa25.41■■□□□ 1.66
COLCA2-201ENST00000398035 PLEKHG2Q9H7P9 1386 aa25.4■■□□□ 1.66
COLCA2-201ENST00000398035 NCAPD2Q15021 1401 aa25.4■■□□□ 1.66
COLCA2-201ENST00000398035 IL13P35225 146 aa25.39■■□□□ 1.66
COLCA2-201ENST00000398035 MEGF6O75095 1541 aa25.39■■□□□ 1.65
COLCA2-201ENST00000398035 EZH2Q15910 746 aaKnown RBP25.38■■□□□ 1.65
COLCA2-201ENST00000398035 MAP2P11137 1827 aaKnown RBP25.37■■□□□ 1.65
COLCA2-201ENST00000398035 DIAPH1O60610 1272 aaKnown RBP25.37■■□□□ 1.65
COLCA2-201ENST00000398035 ACSBG1Q96GR2 724 aa25.37■■□□□ 1.65
COLCA2-201ENST00000398035 KCNQ2O43526 872 aa25.36■■□□□ 1.65
COLCA2-201ENST00000398035 CFAP53Q96M91 514 aa25.36■■□□□ 1.65
COLCA2-201ENST00000398035 RGPD1P0DJD0 1748 aa25.35■■□□□ 1.65
COLCA2-201ENST00000398035 AMOTQ4VCS5 1084 aa25.35■■□□□ 1.65
COLCA2-201ENST00000398035 WNK3Q9BYP7 1800 aa25.34■■□□□ 1.65
COLCA2-201ENST00000398035 DDX10Q13206 875 aaKnown RBP25.34■■□□□ 1.65
COLCA2-201ENST00000398035 PLEKHO1Q53GL0 409 aaPredicted RBP25.34■■□□□ 1.65
COLCA2-201ENST00000398035 NBPF14Q5TI25 921 aa25.32■■□□□ 1.64
COLCA2-201ENST00000398035 SULT6B1Q6IMI4 303 aa25.32■■□□□ 1.64
COLCA2-201ENST00000398035 PTF1AQ7RTS3 328 aa25.32■■□□□ 1.64
COLCA2-201ENST00000398035 CYP27B1O15528 508 aa25.31■■□□□ 1.64
COLCA2-201ENST00000398035 PRIM1P49642 420 aaKnown RBP25.31■■□□□ 1.64
COLCA2-201ENST00000398035 NKX1-1Q15270 411 aaPredicted RBP25.31■■□□□ 1.64
COLCA2-201ENST00000398035 IFNL2Q8IZJ0 200 aa25.31■■□□□ 1.64
COLCA2-201ENST00000398035 PPP2R1AP30153 589 aa25.3■■□□□ 1.64
COLCA2-201ENST00000398035 SYTL4Q96C24 671 aaPredicted RBP25.3■■□□□ 1.64
COLCA2-201ENST00000398035 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
COLCA2-201ENST00000398035 KDRP35968 1356 aa25.28■■□□□ 1.64
COLCA2-201ENST00000398035 HSP90AB1P08238 724 aaKnown RBP25.28■■□□□ 1.64
COLCA2-201ENST00000398035 RALBP1Q15311 655 aa25.27■■□□□ 1.64
COLCA2-201ENST00000398035 PHKG2P15735 406 aa25.26■■□□□ 1.63
COLCA2-201ENST00000398035 HMGB2P26583 209 aaKnown RBP25.26■■□□□ 1.63
COLCA2-201ENST00000398035 AEBP1Q8IUX7 1158 aa25.26■■□□□ 1.63
COLCA2-201ENST00000398035 TXNRD1Q16881 649 aa25.25■■□□□ 1.63
COLCA2-201ENST00000398035 RGPD2P0DJD1 1756 aa25.25■■□□□ 1.63
COLCA2-201ENST00000398035 PROM2Q8N271 834 aa25.24■■□□□ 1.63
COLCA2-201ENST00000398035 TNS1Q9HBL0 1735 aaKnown RBP25.24■■□□□ 1.63
COLCA2-201ENST00000398035 U2SURPO15042 1029 aaKnown RBP25.23■■□□□ 1.63
COLCA2-201ENST00000398035 C1orf141Q5JVX7 400 aa25.22■■□□□ 1.63
COLCA2-201ENST00000398035 SLC27A3Q5K4L6 730 aa25.22■■□□□ 1.63
COLCA2-201ENST00000398035 HMOX1P09601 288 aa25.21■■□□□ 1.63
COLCA2-201ENST00000398035 DCAF5Q96JK2 942 aa25.21■■□□□ 1.63
COLCA2-201ENST00000398035 ZNF530Q6P9A1 599 aaPredicted RBP25.2■■□□□ 1.63
COLCA2-201ENST00000398035 MPRIPQ6WCQ1 1025 aa25.2■■□□□ 1.62
COLCA2-201ENST00000398035 ZNF316A6NFI3 1004 aaPredicted RBP25.19■■□□□ 1.62
COLCA2-201ENST00000398035 ERVV-2B6SEH9 535 aa25.19■■□□□ 1.62
COLCA2-201ENST00000398035 R3HDM1Q15032 1099 aaKnown RBP25.18■■□□□ 1.62
COLCA2-201ENST00000398035 SMARCC1Q92922 1105 aaPredicted RBP25.18■■□□□ 1.62
COLCA2-201ENST00000398035 TMOD3Q9NYL9 352 aa25.17■■□□□ 1.62
COLCA2-201ENST00000398035 NHSQ6T4R5 1651 aa25.17■■□□□ 1.62
COLCA2-201ENST00000398035 AKAP4Q5JQC9 854 aa25.16■■□□□ 1.62
COLCA2-201ENST00000398035 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
COLCA2-201ENST00000398035 PIGBQ92521 554 aa25.15■■□□□ 1.62
COLCA2-201ENST00000398035 COL3A1P02461 1466 aaPredicted RBP25.14■■□□□ 1.62
COLCA2-201ENST00000398035 PSDA5PKW4 1024 aaPredicted RBP25.14■■□□□ 1.62
COLCA2-201ENST00000398035 FCHSD2O94868 740 aa25.14■■□□□ 1.62
COLCA2-201ENST00000398035 STK32BQ9NY57 414 aa25.14■■□□□ 1.62
COLCA2-201ENST00000398035 U2AF1L5P0DN76 240 aaPredicted RBP25.13■■□□□ 1.61
COLCA2-201ENST00000398035 U2AF1Q01081 240 aaKnown RBP eCLIP25.13■■□□□ 1.61
COLCA2-201ENST00000398035 PKD1L3Q7Z443 1732 aa25.12■■□□□ 1.61
COLCA2-201ENST00000398035 CABP4P57796 275 aa25.12■■□□□ 1.61
COLCA2-201ENST00000398035 SLC15A2Q16348 729 aa25.11■■□□□ 1.61
COLCA2-201ENST00000398035 GAS2L2Q8NHY3 880 aa25.11■■□□□ 1.61
COLCA2-201ENST00000398035 RGPD3A6NKT7 1758 aaPredicted RBP25.1■■□□□ 1.61
COLCA2-201ENST00000398035 RGPD4Q7Z3J3 1758 aa25.1■■□□□ 1.61
COLCA2-201ENST00000398035 MTHFSDQ2M296 383 aaKnown RBP25.1■■□□□ 1.61
COLCA2-201ENST00000398035 MYBBP1AQ9BQG0 1328 aaKnown RBP25.1■■□□□ 1.61
COLCA2-201ENST00000398035 LRRC4BQ9NT99 713 aa25.1■■□□□ 1.61
COLCA2-201ENST00000398035 CCNL1Q9UK58 526 aaPredicted RBP25.1■■□□□ 1.61
COLCA2-201ENST00000398035 SHANK3Q9BYB0 1731 aa25.09■■□□□ 1.61
COLCA2-201ENST00000398035 PNNQ9H307 717 aaKnown RBP25.09■■□□□ 1.61
COLCA2-201ENST00000398035 RSPH6AQ9H0K4 717 aa25.08■■□□□ 1.61
COLCA2-201ENST00000398035 PALLDQ8WX93 1383 aa25.07■■□□□ 1.6
COLCA2-201ENST00000398035 NEFMP07197 916 aa25.07■■□□□ 1.6
COLCA2-201ENST00000398035 PRKAR2BP31323 418 aa25.07■■□□□ 1.6
COLCA2-201ENST00000398035 PRKRIP1Q9H875 184 aaPredicted RBP25.06■■□□□ 1.6
COLCA2-201ENST00000398035 ANO8Q9HCE9 1232 aaPredicted RBP25.06■■□□□ 1.6
COLCA2-201ENST00000398035 NFATC2IPQ8NCF5 419 aa25.04■■□□□ 1.6
COLCA2-201ENST00000398035 RREB1Q92766 1687 aa25.04■■□□□ 1.6
COLCA2-201ENST00000398035 GNAT3A8MTJ3 354 aa25.03■■□□□ 1.6
COLCA2-201ENST00000398035 RNMTO43148 476 aaKnown RBP25.03■■□□□ 1.6
COLCA2-201ENST00000398035 ATG3Q9NT62 314 aa25.03■■□□□ 1.6
COLCA2-201ENST00000398035 ASAP1Q9ULH1 1129 aa25.03■■□□□ 1.6
COLCA2-201ENST00000398035 BTAF1O14981 1849 aa25.02■■□□□ 1.6
COLCA2-201ENST00000398035 DOT1LQ8TEK3 1739 aa25.02■■□□□ 1.6
COLCA2-201ENST00000398035 AKT1S1Q96B36 256 aa25.02■■□□□ 1.6
COLCA2-201ENST00000398035 PHACTR3Q96KR7 559 aa25.02■■□□□ 1.6
COLCA2-201ENST00000398035 KAT6BQ8WYB5 2073 aa25.01■■□□□ 1.6
COLCA2-201ENST00000398035 KDM6AO15550 1401 aaPredicted RBP25.01■■□□□ 1.59
COLCA2-201ENST00000398035 LOC102724428A0A0B4J2F2 783 aa25.01■■□□□ 1.59
COLCA2-201ENST00000398035 SIK1P57059 783 aa25.01■■□□□ 1.59
COLCA2-201ENST00000398035 SLC52A2Q9HAB3 445 aa25.01■■□□□ 1.59
COLCA2-201ENST00000398035 LGR6Q9HBX8 967 aa25.01■■□□□ 1.59
COLCA2-201ENST00000398035 KCNQ4P56696 695 aa25■■□□□ 1.59
COLCA2-201ENST00000398035 TFCP2L1Q9NZI6 479 aa25■■□□□ 1.59
COLCA2-201ENST00000398035 NUP188Q5SRE5 1749 aa24.98■■□□□ 1.59
COLCA2-201ENST00000398035 HTATSF1O43719 755 aaKnown RBP24.97■■□□□ 1.59
COLCA2-201ENST00000398035 ATP6V1AP38606 617 aa24.97■■□□□ 1.59
COLCA2-201ENST00000398035 SPON1Q9HCB6 807 aa24.97■■□□□ 1.59
COLCA2-201ENST00000398035 MAP3K5Q99683 1374 aa24.96■■□□□ 1.59
COLCA2-201ENST00000398035 ZNF827Q17R98 1081 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms