RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 DEFB132Q7Z7B7 95 aa34.16■■■■□ 3.06
TSPAN4-207ENST00000397411 IGSF1Q8N6C5 1336 aa34.15■■■■□ 3.06
TSPAN4-207ENST00000397411 SPG7Q9UQ90 795 aa34.14■■■■□ 3.06
TSPAN4-207ENST00000397411 SULT6B1Q6IMI4 303 aa34.12■■■■□ 3.05
TSPAN4-207ENST00000397411 ACSBG1Q96GR2 724 aa34.12■■■■□ 3.05
TSPAN4-207ENST00000397411 BCL11BQ9C0K0 894 aaPredicted RBP34.11■■■■□ 3.05
TSPAN4-207ENST00000397411 NCAPD2Q15021 1401 aa34.11■■■■□ 3.05
TSPAN4-207ENST00000397411 EP400Q96L91 3159 aa34.11■■■■□ 3.05
TSPAN4-207ENST00000397411 SBF2Q86WG5 1849 aa34.09■■■■□ 3.05
TSPAN4-207ENST00000397411 PCDH11XQ9BZA7 1347 aa34.09■■■■□ 3.05
TSPAN4-207ENST00000397411 PCDH11YQ9BZA8 1340 aa34.09■■■■□ 3.05
TSPAN4-207ENST00000397411 EN1Q05925 392 aaPredicted RBP34.09■■■■□ 3.05
TSPAN4-207ENST00000397411 RALBP1Q15311 655 aa34.09■■■■□ 3.05
TSPAN4-207ENST00000397411 BCL9O00512 1426 aa34.09■■■■□ 3.05
TSPAN4-207ENST00000397411 U2SURPO15042 1029 aaKnown RBP34.08■■■■□ 3.05
TSPAN4-207ENST00000397411 PLEKHO1Q53GL0 409 aaPredicted RBP34.06■■■■□ 3.04
TSPAN4-207ENST00000397411 AEBP1Q8IUX7 1158 aa34.06■■■■□ 3.04
TSPAN4-207ENST00000397411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.06■■■■□ 3.04
TSPAN4-207ENST00000397411 PARD3Q8TEW0 1356 aa34.06■■■■□ 3.04
TSPAN4-207ENST00000397411 NUDCQ9Y266 331 aa34.05■■■■□ 3.04
TSPAN4-207ENST00000397411 TNS1Q9HBL0 1735 aaKnown RBP34.04■■■■□ 3.04
TSPAN4-207ENST00000397411 HMOX1P09601 288 aa34.04■■■■□ 3.04
TSPAN4-207ENST00000397411 KCNQ2O43526 872 aa34.03■■■■□ 3.04
TSPAN4-207ENST00000397411 SYTL4Q96C24 671 aaPredicted RBP34.03■■■■□ 3.04
TSPAN4-207ENST00000397411 PTF1AQ7RTS3 328 aa34.02■■■■□ 3.04
TSPAN4-207ENST00000397411 SHANK3Q9BYB0 1731 aa34.01■■■■□ 3.04
TSPAN4-207ENST00000397411 CYP27B1O15528 508 aa34.01■■■■□ 3.03
TSPAN4-207ENST00000397411 EZH2Q15910 746 aaKnown RBP34■■■■□ 3.03
TSPAN4-207ENST00000397411 AMOTQ4VCS5 1084 aa34■■■■□ 3.03
TSPAN4-207ENST00000397411 PRIM1P49642 420 aaKnown RBP33.99■■■■□ 3.03
TSPAN4-207ENST00000397411 IFNL2Q8IZJ0 200 aa33.99■■■■□ 3.03
TSPAN4-207ENST00000397411 PKD1L3Q7Z443 1732 aa33.99■■■■□ 3.03
TSPAN4-207ENST00000397411 COL3A1P02461 1466 aaPredicted RBP33.96■■■■□ 3.03
TSPAN4-207ENST00000397411 CAMKK2Q96RR4 588 aa33.96■■■■□ 3.03
TSPAN4-207ENST00000397411 KDRP35968 1356 aa33.96■■■■□ 3.03
TSPAN4-207ENST00000397411 ZNF530Q6P9A1 599 aaPredicted RBP33.95■■■■□ 3.03
TSPAN4-207ENST00000397411 PLEKHG2Q9H7P9 1386 aa33.95■■■■□ 3.02
TSPAN4-207ENST00000397411 NHSQ6T4R5 1651 aa33.94■■■■□ 3.02
TSPAN4-207ENST00000397411 PLSCR1O15162 318 aa33.94■■■■□ 3.02
TSPAN4-207ENST00000397411 PHKG2P15735 406 aa33.94■■■■□ 3.02
TSPAN4-207ENST00000397411 U2AF1L5P0DN76 240 aaPredicted RBP33.93■■■■□ 3.02
TSPAN4-207ENST00000397411 U2AF1Q01081 240 aaKnown RBP eCLIP33.93■■■■□ 3.02
TSPAN4-207ENST00000397411 C1orf141Q5JVX7 400 aa33.93■■■■□ 3.02
TSPAN4-207ENST00000397411 MYBBP1AQ9BQG0 1328 aaKnown RBP33.92■■■■□ 3.02
TSPAN4-207ENST00000397411 HSP90AB1P08238 724 aaKnown RBP33.91■■■■□ 3.02
TSPAN4-207ENST00000397411 DOT1LQ8TEK3 1739 aa33.9■■■■□ 3.02
TSPAN4-207ENST00000397411 NKX1-1Q15270 411 aaPredicted RBP33.9■■■■□ 3.02
TSPAN4-207ENST00000397411 MPRIPQ6WCQ1 1025 aa33.88■■■■□ 3.01
TSPAN4-207ENST00000397411 PRKRIP1Q9H875 184 aaPredicted RBP33.88■■■■□ 3.01
TSPAN4-207ENST00000397411 BTAF1O14981 1849 aa33.86■■■■□ 3.01
TSPAN4-207ENST00000397411 NBPF14Q5TI25 921 aa33.83■■■■□ 3.01
TSPAN4-207ENST00000397411 DCAF5Q96JK2 942 aa33.83■■■■□ 3.01
TSPAN4-207ENST00000397411 PRKAR2BP31323 418 aa33.82■■■■□ 3
TSPAN4-207ENST00000397411 TXNRD1Q16881 649 aa33.82■■■■□ 3
TSPAN4-207ENST00000397411 AKAP4Q5JQC9 854 aa33.81■■■■□ 3
TSPAN4-207ENST00000397411 TMOD3Q9NYL9 352 aa33.81■■■■□ 3
TSPAN4-207ENST00000397411 FCHSD2O94868 740 aa33.8■■■■□ 3
TSPAN4-207ENST00000397411 NEFMP07197 916 aa33.8■■■■□ 3
TSPAN4-207ENST00000397411 MTHFSDQ2M296 383 aaKnown RBP33.8■■■■□ 3
TSPAN4-207ENST00000397411 RSPH6AQ9H0K4 717 aa33.79■■■■□ 3
TSPAN4-207ENST00000397411 ITGB4P16144 1822 aa33.78■■■■□ 3
TSPAN4-207ENST00000397411 RGPD3A6NKT7 1758 aaPredicted RBP33.77■■■■□ 3
TSPAN4-207ENST00000397411 RGPD4Q7Z3J3 1758 aa33.77■■■■□ 3
TSPAN4-207ENST00000397411 ERVV-2B6SEH9 535 aa33.77■■■■□ 3
TSPAN4-207ENST00000397411 ANP32CO43423 234 aa33.77■■■■□ 3
TSPAN4-207ENST00000397411 CABP4P57796 275 aa33.77■■■■□ 3
TSPAN4-207ENST00000397411 PROM2Q8N271 834 aa33.77■■■■□ 3
TSPAN4-207ENST00000397411 GAS2L2Q8NHY3 880 aa33.77■■■■□ 3
TSPAN4-207ENST00000397411 PIGBQ92521 554 aa33.76■■■□□ 2.99
TSPAN4-207ENST00000397411 PNNQ9H307 717 aaKnown RBP33.75■■■□□ 2.99
TSPAN4-207ENST00000397411 RREB1Q92766 1687 aa33.74■■■□□ 2.99
TSPAN4-207ENST00000397411 TOGARAM1Q9Y4F4 1720 aa33.74■■■□□ 2.99
TSPAN4-207ENST00000397411 SMARCC1Q92922 1105 aaPredicted RBP33.74■■■□□ 2.99
TSPAN4-207ENST00000397411 PHACTR3Q96KR7 559 aa33.73■■■□□ 2.99
TSPAN4-207ENST00000397411 PSDA5PKW4 1024 aaPredicted RBP33.71■■■□□ 2.99
TSPAN4-207ENST00000397411 SLC27A3Q5K4L6 730 aa33.71■■■□□ 2.99
TSPAN4-207ENST00000397411 NUP188Q5SRE5 1749 aa33.7■■■□□ 2.99
TSPAN4-207ENST00000397411 R3HDM1Q15032 1099 aaKnown RBP33.7■■■□□ 2.99
TSPAN4-207ENST00000397411 WDR43Q15061 677 aaKnown RBP eCLIP33.7■■■□□ 2.99
TSPAN4-207ENST00000397411 GNAT3A8MTJ3 354 aa33.68■■■□□ 2.98
TSPAN4-207ENST00000397411 CCNL1Q9UK58 526 aaPredicted RBP33.68■■■□□ 2.98
TSPAN4-207ENST00000397411 KDM6AO15550 1401 aaPredicted RBP33.68■■■□□ 2.98
TSPAN4-207ENST00000397411 RNMTO43148 476 aaKnown RBP33.67■■■□□ 2.98
TSPAN4-207ENST00000397411 LGR6Q9HBX8 967 aa33.67■■■□□ 2.98
TSPAN4-207ENST00000397411 STK32BQ9NY57 414 aa33.67■■■□□ 2.98
TSPAN4-207ENST00000397411 NFATC2IPQ8NCF5 419 aa33.66■■■□□ 2.98
TSPAN4-207ENST00000397411 PALLDQ8WX93 1383 aa33.66■■■□□ 2.98
TSPAN4-207ENST00000397411 ASAP1Q9ULH1 1129 aa33.65■■■□□ 2.98
TSPAN4-207ENST00000397411 MAP3K5Q99683 1374 aa33.64■■■□□ 2.98
TSPAN4-207ENST00000397411 MAPK8IP3Q9UPT6 1336 aa33.64■■■□□ 2.98
TSPAN4-207ENST00000397411 KCNQ4P56696 695 aa33.64■■■□□ 2.98
TSPAN4-207ENST00000397411 SCN11AQ9UI33 1791 aa33.63■■■□□ 2.97
TSPAN4-207ENST00000397411 LRRC4BQ9NT99 713 aa33.63■■■□□ 2.97
TSPAN4-207ENST00000397411 HMGB2P26583 209 aaKnown RBP33.62■■■□□ 2.97
TSPAN4-207ENST00000397411 RTF1Q92541 710 aaKnown RBP33.62■■■□□ 2.97
TSPAN4-207ENST00000397411 ATG3Q9NT62 314 aa33.62■■■□□ 2.97
TSPAN4-207ENST00000397411 LY75O60449 1722 aa33.61■■■□□ 2.97
TSPAN4-207ENST00000397411 SLC52A2Q9HAB3 445 aa33.6■■■□□ 2.97
TSPAN4-207ENST00000397411 VIRMAQ69YN4 1812 aaKnown RBP33.59■■■□□ 2.97
TSPAN4-207ENST00000397411 TEFQ10587 303 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms