RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CFAP53Q96M91 514 aa28.55■■■□□ 2.16
TSPAN4-206ENST00000397408 TRIM37O94972 964 aa28.54■■■□□ 2.16
TSPAN4-206ENST00000397408 SF3B2Q13435 895 aaKnown RBP28.54■■■□□ 2.16
TSPAN4-206ENST00000397408 BCL9O00512 1426 aa28.54■■■□□ 2.16
TSPAN4-206ENST00000397408 PKD1L3Q7Z443 1732 aa28.54■■■□□ 2.16
TSPAN4-206ENST00000397408 TNS1Q9HBL0 1735 aaKnown RBP28.54■■■□□ 2.16
TSPAN4-206ENST00000397408 RALBP1Q15311 655 aa28.53■■■□□ 2.16
TSPAN4-206ENST00000397408 AEBP1Q8IUX7 1158 aa28.53■■■□□ 2.16
TSPAN4-206ENST00000397408 SBF2Q86WG5 1849 aa28.52■■■□□ 2.16
TSPAN4-206ENST00000397408 SULT6B1Q6IMI4 303 aa28.52■■■□□ 2.16
TSPAN4-206ENST00000397408 KDRP35968 1356 aa28.5■■■□□ 2.15
TSPAN4-206ENST00000397408 PCDH11XQ9BZA7 1347 aa28.5■■■□□ 2.15
TSPAN4-206ENST00000397408 PCDH11YQ9BZA8 1340 aa28.5■■■□□ 2.15
TSPAN4-206ENST00000397408 PLEKHG2Q9H7P9 1386 aa28.47■■■□□ 2.15
TSPAN4-206ENST00000397408 U2SURPO15042 1029 aaKnown RBP28.47■■■□□ 2.15
TSPAN4-206ENST00000397408 DEFB132Q7Z7B7 95 aa28.47■■■□□ 2.15
TSPAN4-206ENST00000397408 SPG7Q9UQ90 795 aa28.47■■■□□ 2.15
TSPAN4-206ENST00000397408 HMOX1P09601 288 aa28.46■■■□□ 2.15
TSPAN4-206ENST00000397408 ACSBG1Q96GR2 724 aa28.45■■■□□ 2.15
TSPAN4-206ENST00000397408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.45■■■□□ 2.15
TSPAN4-206ENST00000397408 CYP27B1O15528 508 aa28.44■■■□□ 2.14
TSPAN4-206ENST00000397408 BAG6P46379 1132 aa28.44■■■□□ 2.14
TSPAN4-206ENST00000397408 NHSQ6T4R5 1651 aa28.44■■■□□ 2.14
TSPAN4-206ENST00000397408 MYBBP1AQ9BQG0 1328 aaKnown RBP28.44■■■□□ 2.14
TSPAN4-206ENST00000397408 PTF1AQ7RTS3 328 aa28.43■■■□□ 2.14
TSPAN4-206ENST00000397408 DOT1LQ8TEK3 1739 aa28.43■■■□□ 2.14
TSPAN4-206ENST00000397408 KAT6BQ8WYB5 2073 aa28.43■■■□□ 2.14
TSPAN4-206ENST00000397408 APBA3O96018 575 aa28.43■■■□□ 2.14
TSPAN4-206ENST00000397408 BCL11BQ9C0K0 894 aaPredicted RBP28.43■■■□□ 2.14
TSPAN4-206ENST00000397408 PRKRIP1Q9H875 184 aaPredicted RBP28.43■■■□□ 2.14
TSPAN4-206ENST00000397408 NUDCQ9Y266 331 aa28.42■■■□□ 2.14
TSPAN4-206ENST00000397408 KCNQ2O43526 872 aa28.41■■■□□ 2.14
TSPAN4-206ENST00000397408 PLEKHO1Q53GL0 409 aaPredicted RBP28.41■■■□□ 2.14
TSPAN4-206ENST00000397408 EN1Q05925 392 aaPredicted RBP28.38■■■□□ 2.13
TSPAN4-206ENST00000397408 AMOTQ4VCS5 1084 aa28.38■■■□□ 2.13
TSPAN4-206ENST00000397408 IFNL2Q8IZJ0 200 aa28.37■■■□□ 2.13
TSPAN4-206ENST00000397408 U2AF1L5P0DN76 240 aaPredicted RBP28.36■■■□□ 2.13
TSPAN4-206ENST00000397408 PHKG2P15735 406 aa28.36■■■□□ 2.13
TSPAN4-206ENST00000397408 U2AF1Q01081 240 aaKnown RBP eCLIP28.36■■■□□ 2.13
TSPAN4-206ENST00000397408 ZNF530Q6P9A1 599 aaPredicted RBP28.36■■■□□ 2.13
TSPAN4-206ENST00000397408 SYTL4Q96C24 671 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-206ENST00000397408 TOGARAM1Q9Y4F4 1720 aa28.34■■■□□ 2.13
TSPAN4-206ENST00000397408 BTAF1O14981 1849 aa28.34■■■□□ 2.13
TSPAN4-206ENST00000397408 PRIM1P49642 420 aaKnown RBP28.34■■■□□ 2.13
TSPAN4-206ENST00000397408 NKX1-1Q15270 411 aaPredicted RBP28.34■■■□□ 2.13
TSPAN4-206ENST00000397408 EZH2Q15910 746 aaKnown RBP28.32■■■□□ 2.12
TSPAN4-206ENST00000397408 CAMKK2Q96RR4 588 aa28.32■■■□□ 2.12
TSPAN4-206ENST00000397408 RSPH6AQ9H0K4 717 aa28.32■■■□□ 2.12
TSPAN4-206ENST00000397408 RGPD3A6NKT7 1758 aaPredicted RBP28.31■■■□□ 2.12
TSPAN4-206ENST00000397408 RGPD4Q7Z3J3 1758 aa28.31■■■□□ 2.12
TSPAN4-206ENST00000397408 C1orf141Q5JVX7 400 aa28.31■■■□□ 2.12
TSPAN4-206ENST00000397408 PRKAR2BP31323 418 aa28.3■■■□□ 2.12
TSPAN4-206ENST00000397408 PLSCR1O15162 318 aa28.28■■■□□ 2.12
TSPAN4-206ENST00000397408 HSP90AB1P08238 724 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-206ENST00000397408 RREB1Q92766 1687 aa28.27■■■□□ 2.12
TSPAN4-206ENST00000397408 ITGB4P16144 1822 aa28.27■■■□□ 2.12
TSPAN4-206ENST00000397408 ANP32CO43423 234 aa28.26■■■□□ 2.12
TSPAN4-206ENST00000397408 FCHSD2O94868 740 aa28.26■■■□□ 2.12
TSPAN4-206ENST00000397408 MTHFSDQ2M296 383 aaKnown RBP28.26■■■□□ 2.12
TSPAN4-206ENST00000397408 KDM6AO15550 1401 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-206ENST00000397408 DCAF5Q96JK2 942 aa28.26■■■□□ 2.11
TSPAN4-206ENST00000397408 AKAP4Q5JQC9 854 aa28.25■■■□□ 2.11
TSPAN4-206ENST00000397408 MPRIPQ6WCQ1 1025 aa28.25■■■□□ 2.11
TSPAN4-206ENST00000397408 NUP188Q5SRE5 1749 aa28.23■■■□□ 2.11
TSPAN4-206ENST00000397408 GAS2L2Q8NHY3 880 aa28.23■■■□□ 2.11
TSPAN4-206ENST00000397408 PHACTR3Q96KR7 559 aa28.23■■■□□ 2.11
TSPAN4-206ENST00000397408 TMOD3Q9NYL9 352 aa28.2■■■□□ 2.11
TSPAN4-206ENST00000397408 TXNRD1Q16881 649 aa28.19■■■□□ 2.1
TSPAN4-206ENST00000397408 PIGBQ92521 554 aa28.19■■■□□ 2.1
TSPAN4-206ENST00000397408 SCN11AQ9UI33 1791 aa28.19■■■□□ 2.1
TSPAN4-206ENST00000397408 ERVV-2B6SEH9 535 aa28.18■■■□□ 2.1
TSPAN4-206ENST00000397408 PROM2Q8N271 834 aa28.18■■■□□ 2.1
TSPAN4-206ENST00000397408 MAP3K5Q99683 1374 aa28.18■■■□□ 2.1
TSPAN4-206ENST00000397408 WDR43Q15061 677 aaKnown RBP eCLIP28.17■■■□□ 2.1
TSPAN4-206ENST00000397408 LY75O60449 1722 aa28.15■■■□□ 2.1
TSPAN4-206ENST00000397408 ADAMTS7Q9UKP4 1686 aa28.15■■■□□ 2.1
TSPAN4-206ENST00000397408 NEFMP07197 916 aa28.15■■■□□ 2.1
TSPAN4-206ENST00000397408 CABP4P57796 275 aa28.15■■■□□ 2.1
TSPAN4-206ENST00000397408 VIRMAQ69YN4 1812 aaKnown RBP28.15■■■□□ 2.1
TSPAN4-206ENST00000397408 PALLDQ8WX93 1383 aa28.14■■■□□ 2.1
TSPAN4-206ENST00000397408 RNMTO43148 476 aaKnown RBP28.14■■■□□ 2.1
TSPAN4-206ENST00000397408 PLEKHF1Q96S99 279 aa28.14■■■□□ 2.1
TSPAN4-206ENST00000397408 PNNQ9H307 717 aaKnown RBP28.14■■■□□ 2.1
TSPAN4-206ENST00000397408 LGR6Q9HBX8 967 aa28.14■■■□□ 2.1
TSPAN4-206ENST00000397408 GNAT3A8MTJ3 354 aa28.13■■■□□ 2.09
TSPAN4-206ENST00000397408 CCDC184Q52MB2 194 aa28.12■■■□□ 2.09
TSPAN4-206ENST00000397408 MRC1P22897 1456 aa28.12■■■□□ 2.09
TSPAN4-206ENST00000397408 MAPK8IP3Q9UPT6 1336 aa28.12■■■□□ 2.09
TSPAN4-206ENST00000397408 SMARCC1Q92922 1105 aaPredicted RBP28.11■■■□□ 2.09
TSPAN4-206ENST00000397408 ASAP1Q9ULH1 1129 aa28.1■■■□□ 2.09
TSPAN4-206ENST00000397408 SLC27A3Q5K4L6 730 aa28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 NFATC2IPQ8NCF5 419 aa28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 LRRC4BQ9NT99 713 aa28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 NBPF14Q5TI25 921 aa28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 SLC52A2Q9HAB3 445 aa28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 ANO8Q9HCE9 1232 aaPredicted RBP28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 CCNL1Q9UK58 526 aaPredicted RBP28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 ADAMTS8Q9UP79 889 aa28.09■■■□□ 2.09
TSPAN4-206ENST00000397408 PAPPAQ13219 1627 aa28.08■■■□□ 2.09
TSPAN4-206ENST00000397408 KCNQ4P56696 695 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms