RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 EMILIN1Q9Y6C2 1016 aa19.08■□□□□ 0.64
SEC13-204ENST00000397099 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
SEC13-204ENST00000397099 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
SEC13-204ENST00000397099 TATP17735 454 aaPredicted RBP19.07■□□□□ 0.64
SEC13-204ENST00000397099 TXNRD1Q16881 649 aa19.07■□□□□ 0.64
SEC13-204ENST00000397099 ANO8Q9HCE9 1232 aaPredicted RBP19.07■□□□□ 0.64
SEC13-204ENST00000397099 PLEKHG2Q9H7P9 1386 aa19.06■□□□□ 0.64
SEC13-204ENST00000397099 PROM2Q8N271 834 aa19.06■□□□□ 0.64
SEC13-204ENST00000397099 SPON1Q9HCB6 807 aa19.06■□□□□ 0.64
SEC13-204ENST00000397099 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
SEC13-204ENST00000397099 PPP1R1BQ9UD71 204 aaPredicted RBP19.06■□□□□ 0.64
SEC13-204ENST00000397099 STK32BQ9NY57 414 aa19.05■□□□□ 0.64
SEC13-204ENST00000397099 NCAPD2Q15021 1401 aa19.04■□□□□ 0.64
SEC13-204ENST00000397099 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
SEC13-204ENST00000397099 MEGF6O75095 1541 aa19.04■□□□□ 0.64
SEC13-204ENST00000397099 SHANK3Q9BYB0 1731 aa19.03■□□□□ 0.64
SEC13-204ENST00000397099 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.64
SEC13-204ENST00000397099 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.64
SEC13-204ENST00000397099 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
SEC13-204ENST00000397099 USHBP1Q8N6Y0 703 aa19.02■□□□□ 0.64
SEC13-204ENST00000397099 BTAF1O14981 1849 aa19.02■□□□□ 0.63
SEC13-204ENST00000397099 SYTL4Q96C24 671 aaPredicted RBP19.01■□□□□ 0.63
SEC13-204ENST00000397099 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
SEC13-204ENST00000397099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19■□□□□ 0.63
SEC13-204ENST00000397099 PKD1L3Q7Z443 1732 aa19■□□□□ 0.63
SEC13-204ENST00000397099 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
SEC13-204ENST00000397099 ZBTB7AO95365 584 aa18.99■□□□□ 0.63
SEC13-204ENST00000397099 SLC15A2Q16348 729 aa18.99■□□□□ 0.63
SEC13-204ENST00000397099 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
SEC13-204ENST00000397099 PDGFDQ9GZP0 370 aaPredicted RBP18.99■□□□□ 0.63
SEC13-204ENST00000397099 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
SEC13-204ENST00000397099 DOT1LQ8TEK3 1739 aa18.97■□□□□ 0.63
SEC13-204ENST00000397099 PRIM1P49642 420 aaKnown RBP18.97■□□□□ 0.63
SEC13-204ENST00000397099 EYA1Q99502 592 aa18.97■□□□□ 0.63
SEC13-204ENST00000397099 PER1O15534 1290 aaPredicted RBP18.96■□□□□ 0.63
SEC13-204ENST00000397099 EIF4A2Q14240 407 aaKnown RBP18.96■□□□□ 0.63
SEC13-204ENST00000397099 SLC27A3Q5K4L6 730 aa18.96■□□□□ 0.63
SEC13-204ENST00000397099 CASZ1Q86V15 1759 aa18.96■□□□□ 0.63
SEC13-204ENST00000397099 ATF5Q9Y2D1 282 aaPredicted RBP18.95■□□□□ 0.62
SEC13-204ENST00000397099 IGSF1Q8N6C5 1336 aa18.94■□□□□ 0.62
SEC13-204ENST00000397099 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
SEC13-204ENST00000397099 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
SEC13-204ENST00000397099 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
SEC13-204ENST00000397099 LY75O60449 1722 aa18.91■□□□□ 0.62
SEC13-204ENST00000397099 CYP27B1O15528 508 aa18.9■□□□□ 0.62
SEC13-204ENST00000397099 ZNF827Q17R98 1081 aa18.9■□□□□ 0.62
SEC13-204ENST00000397099 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
SEC13-204ENST00000397099 IFNL2Q8IZJ0 200 aa18.9■□□□□ 0.62
SEC13-204ENST00000397099 MTFR1LQ9H019 292 aa18.9■□□□□ 0.62
SEC13-204ENST00000397099 PAPPAQ13219 1627 aa18.89■□□□□ 0.62
SEC13-204ENST00000397099 KCNQ4P56696 695 aa18.89■□□□□ 0.61
SEC13-204ENST00000397099 HSP90AB1P08238 724 aaKnown RBP18.88■□□□□ 0.61
SEC13-204ENST00000397099 PTGER2P43116 358 aa18.88■□□□□ 0.61
SEC13-204ENST00000397099 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
SEC13-204ENST00000397099 ITGB4P16144 1822 aa18.87■□□□□ 0.61
SEC13-204ENST00000397099 MTHFSP49914 203 aa18.87■□□□□ 0.61
SEC13-204ENST00000397099 SMARCC1Q92922 1105 aaPredicted RBP18.87■□□□□ 0.61
SEC13-204ENST00000397099 TFCP2L1Q9NZI6 479 aa18.87■□□□□ 0.61
SEC13-204ENST00000397099 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
SEC13-204ENST00000397099 KDRP35968 1356 aa18.86■□□□□ 0.61
SEC13-204ENST00000397099 CC2D1BQ5T0F9 858 aaKnown RBP18.86■□□□□ 0.61
SEC13-204ENST00000397099 AKT1S1Q96B36 256 aa18.86■□□□□ 0.61
SEC13-204ENST00000397099 CCNL1Q9UK58 526 aaPredicted RBP18.86■□□□□ 0.61
SEC13-204ENST00000397099 PHKG2P15735 406 aa18.85■□□□□ 0.61
SEC13-204ENST00000397099 IL13P35225 146 aa18.85■□□□□ 0.61
SEC13-204ENST00000397099 MPRIPQ6WCQ1 1025 aa18.84■□□□□ 0.61
SEC13-204ENST00000397099 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.61
SEC13-204ENST00000397099 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
SEC13-204ENST00000397099 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
SEC13-204ENST00000397099 DCAF5Q96JK2 942 aa18.82■□□□□ 0.6
SEC13-204ENST00000397099 FHDC1Q9C0D6 1143 aaPredicted RBP18.82■□□□□ 0.6
SEC13-204ENST00000397099 TMOD3Q9NYL9 352 aa18.82■□□□□ 0.6
SEC13-204ENST00000397099 ERVV-2B6SEH9 535 aa18.81■□□□□ 0.6
SEC13-204ENST00000397099 MSH5O43196 834 aa18.81■□□□□ 0.6
SEC13-204ENST00000397099 SLC16A10Q8TF71 515 aa18.81■□□□□ 0.6
SEC13-204ENST00000397099 ARXQ96QS3 562 aa18.81■□□□□ 0.6
SEC13-204ENST00000397099 PNPLA7Q6ZV29 1317 aa18.8■□□□□ 0.6
SEC13-204ENST00000397099 YY1P25490 414 aa18.8■□□□□ 0.6
SEC13-204ENST00000397099 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
SEC13-204ENST00000397099 SGIP1Q9BQI5 828 aa18.8■□□□□ 0.6
SEC13-204ENST00000397099 PALLDQ8WX93 1383 aa18.8■□□□□ 0.6
SEC13-204ENST00000397099 POLD1P28340 1107 aa18.79■□□□□ 0.6
SEC13-204ENST00000397099 ZNF530Q6P9A1 599 aaPredicted RBP18.79■□□□□ 0.6
SEC13-204ENST00000397099 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
SEC13-204ENST00000397099 SYT17Q9BSW7 474 aa18.79■□□□□ 0.6
SEC13-204ENST00000397099 KLHL34Q8N239 644 aa18.78■□□□□ 0.6
SEC13-204ENST00000397099 PIGBQ92521 554 aa18.78■□□□□ 0.6
SEC13-204ENST00000397099 C5P01031 1676 aa18.78■□□□□ 0.6
SEC13-204ENST00000397099 TAF1LQ8IZX4 1826 aa18.77■□□□□ 0.6
SEC13-204ENST00000397099 AEBP1Q8IUX7 1158 aa18.77■□□□□ 0.6
SEC13-204ENST00000397099 FLAD1Q8NFF5 587 aa18.77■□□□□ 0.6
SEC13-204ENST00000397099 ZNF831Q5JPB2 1677 aa18.75■□□□□ 0.59
SEC13-204ENST00000397099 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
SEC13-204ENST00000397099 COL3A1P02461 1466 aaPredicted RBP18.74■□□□□ 0.59
SEC13-204ENST00000397099 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
SEC13-204ENST00000397099 NUDCQ9Y266 331 aa18.74■□□□□ 0.59
SEC13-204ENST00000397099 SCN11AQ9UI33 1791 aa18.73■□□□□ 0.59
SEC13-204ENST00000397099 LOC102724428A0A0B4J2F2 783 aa18.72■□□□□ 0.59
SEC13-204ENST00000397099 SIK1P57059 783 aa18.72■□□□□ 0.59
SEC13-204ENST00000397099 CABP4P57796 275 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms