RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 PLEKHG2Q9H7P9 1386 aa24.03■■□□□ 1.44
TNFSF13-204ENST00000396542 TATP17735 454 aaPredicted RBP24.03■■□□□ 1.44
TNFSF13-204ENST00000396542 ZCRB1Q8TBF4 217 aaKnown RBP24.02■■□□□ 1.44
TNFSF13-204ENST00000396542 KDRP35968 1356 aa24.01■■□□□ 1.43
TNFSF13-204ENST00000396542 NHSQ6T4R5 1651 aa24■■□□□ 1.43
TNFSF13-204ENST00000396542 DIAPH1O60610 1272 aaKnown RBP23.99■■□□□ 1.43
TNFSF13-204ENST00000396542 TRIM37O94972 964 aa23.98■■□□□ 1.43
TNFSF13-204ENST00000396542 RALBP1Q15311 655 aa23.97■■□□□ 1.43
TNFSF13-204ENST00000396542 DDX54Q8TDD1 881 aaKnown RBP23.97■■□□□ 1.43
TNFSF13-204ENST00000396542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.97■■□□□ 1.43
TNFSF13-204ENST00000396542 PCDH11XQ9BZA7 1347 aa23.96■■□□□ 1.43
TNFSF13-204ENST00000396542 PCDH11YQ9BZA8 1340 aa23.96■■□□□ 1.43
TNFSF13-204ENST00000396542 SF3B2Q13435 895 aaKnown RBP23.96■■□□□ 1.43
TNFSF13-204ENST00000396542 AEBP1Q8IUX7 1158 aa23.96■■□□□ 1.43
TNFSF13-204ENST00000396542 DOT1LQ8TEK3 1739 aa23.96■■□□□ 1.43
TNFSF13-204ENST00000396542 SULT6B1Q6IMI4 303 aa23.95■■□□□ 1.42
TNFSF13-204ENST00000396542 CFAP53Q96M91 514 aa23.95■■□□□ 1.42
TNFSF13-204ENST00000396542 RGPD3A6NKT7 1758 aaPredicted RBP23.94■■□□□ 1.42
TNFSF13-204ENST00000396542 RGPD4Q7Z3J3 1758 aa23.94■■□□□ 1.42
TNFSF13-204ENST00000396542 BCL11BQ9C0K0 894 aaPredicted RBP23.93■■□□□ 1.42
TNFSF13-204ENST00000396542 SPG7Q9UQ90 795 aa23.93■■□□□ 1.42
TNFSF13-204ENST00000396542 CYP27B1O15528 508 aa23.92■■□□□ 1.42
TNFSF13-204ENST00000396542 DEFB132Q7Z7B7 95 aa23.92■■□□□ 1.42
TNFSF13-204ENST00000396542 BAG6P46379 1132 aa23.91■■□□□ 1.42
TNFSF13-204ENST00000396542 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
TNFSF13-204ENST00000396542 TOGARAM1Q9Y4F4 1720 aa23.9■■□□□ 1.42
TNFSF13-204ENST00000396542 BTAF1O14981 1849 aa23.9■■□□□ 1.42
TNFSF13-204ENST00000396542 APBA3O96018 575 aa23.89■■□□□ 1.41
TNFSF13-204ENST00000396542 RREB1Q92766 1687 aa23.89■■□□□ 1.41
TNFSF13-204ENST00000396542 MYBBP1AQ9BQG0 1328 aaKnown RBP23.88■■□□□ 1.41
TNFSF13-204ENST00000396542 KCNQ2O43526 872 aa23.88■■□□□ 1.41
TNFSF13-204ENST00000396542 NKX1-1Q15270 411 aaPredicted RBP23.88■■□□□ 1.41
TNFSF13-204ENST00000396542 PRKRIP1Q9H875 184 aaPredicted RBP23.88■■□□□ 1.41
TNFSF13-204ENST00000396542 U2SURPO15042 1029 aaKnown RBP23.87■■□□□ 1.41
TNFSF13-204ENST00000396542 HMOX1P09601 288 aa23.87■■□□□ 1.41
TNFSF13-204ENST00000396542 AMOTQ4VCS5 1084 aa23.87■■□□□ 1.41
TNFSF13-204ENST00000396542 ACSBG1Q96GR2 724 aa23.87■■□□□ 1.41
TNFSF13-204ENST00000396542 PHKG2P15735 406 aa23.86■■□□□ 1.41
TNFSF13-204ENST00000396542 EN1Q05925 392 aaPredicted RBP23.86■■□□□ 1.41
TNFSF13-204ENST00000396542 PLEKHO1Q53GL0 409 aaPredicted RBP23.86■■□□□ 1.41
TNFSF13-204ENST00000396542 CAMKK2Q96RR4 588 aa23.86■■□□□ 1.41
TNFSF13-204ENST00000396542 KAT6BQ8WYB5 2073 aa23.86■■□□□ 1.41
TNFSF13-204ENST00000396542 ITGB4P16144 1822 aa23.85■■□□□ 1.41
TNFSF13-204ENST00000396542 IFNL2Q8IZJ0 200 aa23.85■■□□□ 1.41
TNFSF13-204ENST00000396542 NUDCQ9Y266 331 aa23.85■■□□□ 1.41
TNFSF13-204ENST00000396542 PLSCR1O15162 318 aa23.84■■□□□ 1.41
TNFSF13-204ENST00000396542 NUP188Q5SRE5 1749 aa23.82■■□□□ 1.4
TNFSF13-204ENST00000396542 PRIM1P49642 420 aaKnown RBP23.82■■□□□ 1.4
TNFSF13-204ENST00000396542 EZH2Q15910 746 aaKnown RBP23.82■■□□□ 1.4
TNFSF13-204ENST00000396542 ZNF530Q6P9A1 599 aaPredicted RBP23.8■■□□□ 1.4
TNFSF13-204ENST00000396542 RSPH6AQ9H0K4 717 aa23.8■■□□□ 1.4
TNFSF13-204ENST00000396542 U2AF1L5P0DN76 240 aaPredicted RBP23.79■■□□□ 1.4
TNFSF13-204ENST00000396542 U2AF1Q01081 240 aaKnown RBP eCLIP23.79■■□□□ 1.4
TNFSF13-204ENST00000396542 SCN11AQ9UI33 1791 aa23.78■■□□□ 1.4
TNFSF13-204ENST00000396542 SYTL4Q96C24 671 aaPredicted RBP23.78■■□□□ 1.4
TNFSF13-204ENST00000396542 ADAMTS7Q9UKP4 1686 aa23.78■■□□□ 1.4
TNFSF13-204ENST00000396542 LY75O60449 1722 aa23.78■■□□□ 1.4
TNFSF13-204ENST00000396542 VIRMAQ69YN4 1812 aaKnown RBP23.77■■□□□ 1.4
TNFSF13-204ENST00000396542 KDM6AO15550 1401 aaPredicted RBP23.77■■□□□ 1.4
TNFSF13-204ENST00000396542 FCHSD2O94868 740 aa23.77■■□□□ 1.4
TNFSF13-204ENST00000396542 HSP90AB1P08238 724 aaKnown RBP23.77■■□□□ 1.4
TNFSF13-204ENST00000396542 MTHFSDQ2M296 383 aaKnown RBP23.76■■□□□ 1.39
TNFSF13-204ENST00000396542 DCAF5Q96JK2 942 aa23.76■■□□□ 1.39
TNFSF13-204ENST00000396542 PRKAR2BP31323 418 aa23.75■■□□□ 1.39
TNFSF13-204ENST00000396542 AKAP4Q5JQC9 854 aa23.75■■□□□ 1.39
TNFSF13-204ENST00000396542 C1orf141Q5JVX7 400 aa23.75■■□□□ 1.39
TNFSF13-204ENST00000396542 PROM2Q8N271 834 aa23.75■■□□□ 1.39
TNFSF13-204ENST00000396542 PHACTR3Q96KR7 559 aa23.73■■□□□ 1.39
TNFSF13-204ENST00000396542 ERVV-2B6SEH9 535 aa23.72■■□□□ 1.39
TNFSF13-204ENST00000396542 MPRIPQ6WCQ1 1025 aa23.72■■□□□ 1.39
TNFSF13-204ENST00000396542 TXNRD1Q16881 649 aa23.71■■□□□ 1.39
TNFSF13-204ENST00000396542 PIGBQ92521 554 aa23.71■■□□□ 1.39
TNFSF13-204ENST00000396542 PAPPAQ13219 1627 aa23.7■■□□□ 1.39
TNFSF13-204ENST00000396542 MRC1P22897 1456 aa23.7■■□□□ 1.38
TNFSF13-204ENST00000396542 GAS2L2Q8NHY3 880 aa23.7■■□□□ 1.38
TNFSF13-204ENST00000396542 TMOD3Q9NYL9 352 aa23.69■■□□□ 1.38
TNFSF13-204ENST00000396542 MAP3K5Q99683 1374 aa23.68■■□□□ 1.38
TNFSF13-204ENST00000396542 ANP32CO43423 234 aa23.68■■□□□ 1.38
TNFSF13-204ENST00000396542 PLEKHF1Q96S99 279 aa23.68■■□□□ 1.38
TNFSF13-204ENST00000396542 PALLDQ8WX93 1383 aa23.65■■□□□ 1.38
TNFSF13-204ENST00000396542 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
TNFSF13-204ENST00000396542 RNMTO43148 476 aaKnown RBP23.65■■□□□ 1.38
TNFSF13-204ENST00000396542 SLC27A3Q5K4L6 730 aa23.65■■□□□ 1.38
TNFSF13-204ENST00000396542 LGR6Q9HBX8 967 aa23.65■■□□□ 1.38
TNFSF13-204ENST00000396542 SIPA1L3O60292 1781 aaPredicted RBP23.65■■□□□ 1.38
TNFSF13-204ENST00000396542 GNAT3A8MTJ3 354 aa23.64■■□□□ 1.37
TNFSF13-204ENST00000396542 SMARCC1Q92922 1105 aaPredicted RBP23.64■■□□□ 1.37
TNFSF13-204ENST00000396542 PNNQ9H307 717 aaKnown RBP23.64■■□□□ 1.37
TNFSF13-204ENST00000396542 LRRC4BQ9NT99 713 aa23.64■■□□□ 1.37
TNFSF13-204ENST00000396542 CABP4P57796 275 aa23.63■■□□□ 1.37
TNFSF13-204ENST00000396542 TAF1LQ8IZX4 1826 aa23.63■■□□□ 1.37
TNFSF13-204ENST00000396542 ZNF831Q5JPB2 1677 aa23.63■■□□□ 1.37
TNFSF13-204ENST00000396542 NBPF14Q5TI25 921 aa23.62■■□□□ 1.37
TNFSF13-204ENST00000396542 ATG3Q9NT62 314 aa23.62■■□□□ 1.37
TNFSF13-204ENST00000396542 ASAP1Q9ULH1 1129 aa23.62■■□□□ 1.37
TNFSF13-204ENST00000396542 C5P01031 1676 aa23.62■■□□□ 1.37
TNFSF13-204ENST00000396542 NFATC2IPQ8NCF5 419 aa23.61■■□□□ 1.37
TNFSF13-204ENST00000396542 IL17REQ8NFR9 667 aa23.61■■□□□ 1.37
TNFSF13-204ENST00000396542 SLC52A2Q9HAB3 445 aa23.61■■□□□ 1.37
TNFSF13-204ENST00000396542 ANO8Q9HCE9 1232 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms