RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 A0A0G2JS52 829 aa13.11□□□□□ -0.31
TUBB-208ENST00000396389 GZF1Q9H116 711 aaPredicted RBP13.1□□□□□ -0.31
TUBB-208ENST00000396389 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
TUBB-208ENST00000396389 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
TUBB-208ENST00000396389 THUMPD2Q9BTF0 503 aaKnown RBP13.09□□□□□ -0.31
TUBB-208ENST00000396389 AATKQ6ZMQ8 1374 aa13.09□□□□□ -0.31
TUBB-208ENST00000396389 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
TUBB-208ENST00000396389 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
TUBB-208ENST00000396389 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
TUBB-208ENST00000396389 TRPM3Q9HCF6 1732 aaPredicted RBP13.09□□□□□ -0.31
TUBB-208ENST00000396389 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
TUBB-208ENST00000396389 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
TUBB-208ENST00000396389 ERBB3P21860 1342 aa13.07□□□□□ -0.32
TUBB-208ENST00000396389 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
TUBB-208ENST00000396389 PANK2Q9BZ23 570 aa13.07□□□□□ -0.32
TUBB-208ENST00000396389 FGD1P98174 961 aa13.07□□□□□ -0.32
TUBB-208ENST00000396389 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
TUBB-208ENST00000396389 IGHDP01880 384 aa13.06□□□□□ -0.32
TUBB-208ENST00000396389 NFAT5O94916 1531 aa13.05□□□□□ -0.32
TUBB-208ENST00000396389 JCADQ9P266 1359 aa13.05□□□□□ -0.32
TUBB-208ENST00000396389 BCAR3O75815 825 aa13.05□□□□□ -0.32
TUBB-208ENST00000396389 ZMYND15Q9H091 742 aa13.05□□□□□ -0.32
TUBB-208ENST00000396389 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
TUBB-208ENST00000396389 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
TUBB-208ENST00000396389 BCL11BQ9C0K0 894 aaPredicted RBP13.05□□□□□ -0.32
TUBB-208ENST00000396389 INSRP06213 1382 aa13.04□□□□□ -0.32
TUBB-208ENST00000396389 COL16A1Q07092 1604 aaPredicted RBP13.04□□□□□ -0.32
TUBB-208ENST00000396389 NHSL1Q5SYE7 1610 aa13.04□□□□□ -0.32
TUBB-208ENST00000396389 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
TUBB-208ENST00000396389 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
TUBB-208ENST00000396389 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
TUBB-208ENST00000396389 RIPK4P57078 832 aa13.03□□□□□ -0.32
TUBB-208ENST00000396389 MCM10Q7L590 875 aa13.03□□□□□ -0.32
TUBB-208ENST00000396389 MARF1Q9Y4F3 1742 aaKnown RBP13.03□□□□□ -0.32
TUBB-208ENST00000396389 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
TUBB-208ENST00000396389 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
TUBB-208ENST00000396389 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
TUBB-208ENST00000396389 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.32
TUBB-208ENST00000396389 RUNDC1Q96C34 613 aa13.02□□□□□ -0.32
TUBB-208ENST00000396389 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.32
TUBB-208ENST00000396389 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
TUBB-208ENST00000396389 USP21Q9UK80 565 aa13.02□□□□□ -0.33
TUBB-208ENST00000396389 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.33
TUBB-208ENST00000396389 RAPGEF4Q8WZA2 1011 aa13.02□□□□□ -0.33
TUBB-208ENST00000396389 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
TUBB-208ENST00000396389 FAM98CQ17RN3 349 aaKnown RBP13.01□□□□□ -0.33
TUBB-208ENST00000396389 PLEKHF1Q96S99 279 aa13.01□□□□□ -0.33
TUBB-208ENST00000396389 FCHSD2O94868 740 aa13.01□□□□□ -0.33
TUBB-208ENST00000396389 SLIT3O75094 1523 aa13.01□□□□□ -0.33
TUBB-208ENST00000396389 LRP6O75581 1613 aa13.01□□□□□ -0.33
TUBB-208ENST00000396389 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
TUBB-208ENST00000396389 FBXO41Q8TF61 875 aa13□□□□□ -0.33
TUBB-208ENST00000396389 LTN1O94822 1766 aa13□□□□□ -0.33
TUBB-208ENST00000396389 AFF2P51816 1311 aa13□□□□□ -0.33
TUBB-208ENST00000396389 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
TUBB-208ENST00000396389 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
TUBB-208ENST00000396389 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
TUBB-208ENST00000396389 GOLGB1Q14789 3259 aaKnown RBP12.99□□□□□ -0.33
TUBB-208ENST00000396389 WDR17Q8IZU2 1322 aa12.99□□□□□ -0.33
TUBB-208ENST00000396389 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
TUBB-208ENST00000396389 CPDO75976 1380 aa12.98□□□□□ -0.33
TUBB-208ENST00000396389 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
TUBB-208ENST00000396389 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
TUBB-208ENST00000396389 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
TUBB-208ENST00000396389 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
TUBB-208ENST00000396389 HSP90AA2PQ14568 343 aaPredicted RBP12.98□□□□□ -0.33
TUBB-208ENST00000396389 PHRF1Q9P1Y6 1649 aaKnown RBP12.98□□□□□ -0.33
TUBB-208ENST00000396389 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
TUBB-208ENST00000396389 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
TUBB-208ENST00000396389 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
TUBB-208ENST00000396389 RGPD5Q99666 1765 aa12.97□□□□□ -0.33
TUBB-208ENST00000396389 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
TUBB-208ENST00000396389 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
TUBB-208ENST00000396389 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
TUBB-208ENST00000396389 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
TUBB-208ENST00000396389 WWC1Q8IX03 1113 aa12.96□□□□□ -0.33
TUBB-208ENST00000396389 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
TUBB-208ENST00000396389 SHPRHQ149N8 1683 aa12.96□□□□□ -0.33
TUBB-208ENST00000396389 TATP17735 454 aaPredicted RBP12.96□□□□□ -0.33
TUBB-208ENST00000396389 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
TUBB-208ENST00000396389 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
TUBB-208ENST00000396389 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
TUBB-208ENST00000396389 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
TUBB-208ENST00000396389 GOLGA6L3A6NEY3 463 aa12.95□□□□□ -0.34
TUBB-208ENST00000396389 L1TD1Q5T7N2 865 aaKnown RBP12.95□□□□□ -0.34
TUBB-208ENST00000396389 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
TUBB-208ENST00000396389 BLMP54132 1417 aaPredicted RBP12.95□□□□□ -0.34
TUBB-208ENST00000396389 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
TUBB-208ENST00000396389 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
TUBB-208ENST00000396389 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
TUBB-208ENST00000396389 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
TUBB-208ENST00000396389 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
TUBB-208ENST00000396389 IL2RBP14784 551 aa12.94□□□□□ -0.34
TUBB-208ENST00000396389 BECN1Q14457 450 aa12.94□□□□□ -0.34
TUBB-208ENST00000396389 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
TUBB-208ENST00000396389 PHF23Q9BUL5 403 aaPredicted RBP12.94□□□□□ -0.34
TUBB-208ENST00000396389 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
TUBB-208ENST00000396389 MEGF6O75095 1541 aa12.94□□□□□ -0.34
TUBB-208ENST00000396389 GLIPR1L2Q4G1C9 344 aa12.94□□□□□ -0.34
TUBB-208ENST00000396389 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms