RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 LRRC59Q96AG4 307 aaKnown RBP15.34■□□□□ 0.05
GTF2A2-202ENST00000396060 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
GTF2A2-202ENST00000396060 FAM208AQ9UK61 1670 aaKnown RBP15.34■□□□□ 0.05
GTF2A2-202ENST00000396060 MAP3K5Q99683 1374 aa15.34■□□□□ 0.05
GTF2A2-202ENST00000396060 RGPD5Q99666 1765 aa15.33■□□□□ 0.05
GTF2A2-202ENST00000396060 VAMP4O75379 141 aa15.33■□□□□ 0.05
GTF2A2-202ENST00000396060 DCTN1Q14203 1278 aa15.33■□□□□ 0.05
GTF2A2-202ENST00000396060 USHBP1Q8N6Y0 703 aa15.33■□□□□ 0.05
GTF2A2-202ENST00000396060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.33■□□□□ 0.05
GTF2A2-202ENST00000396060 MCM10Q7L590 875 aa15.32■□□□□ 0.04
GTF2A2-202ENST00000396060 HAP1P54257 671 aaPredicted RBP15.32■□□□□ 0.04
GTF2A2-202ENST00000396060 AAMPQ13685 434 aa15.32■□□□□ 0.04
GTF2A2-202ENST00000396060 C20orf194Q5TEA3 1177 aa15.32■□□□□ 0.04
GTF2A2-202ENST00000396060 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
GTF2A2-202ENST00000396060 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
GTF2A2-202ENST00000396060 CRBNQ96SW2 442 aa15.32■□□□□ 0.04
GTF2A2-202ENST00000396060 LRRC37A3O60309 1634 aa15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 CEMIPQ8WUJ3 1361 aa15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 ROBO1Q9Y6N7 1651 aa15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 MS4A1P11836 297 aa15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 AKAP4Q5JQC9 854 aa15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 IL17REQ8NFR9 667 aa15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
GTF2A2-202ENST00000396060 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
GTF2A2-202ENST00000396060 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
GTF2A2-202ENST00000396060 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
GTF2A2-202ENST00000396060 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 CHRNA2Q15822 529 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 ZKSCAN2Q63HK3 967 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 C8orf58Q8NAV2 365 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 ARHGAP45Q92619 1136 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 PRDM11Q9NQV5 511 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 IPO8O15397 1037 aaKnown RBP15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 TOM1O60784 492 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 TWISTNBQ3B726 338 aaPredicted RBP15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 B4GALNT3Q6L9W6 998 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 CCDC136Q96JN2 1154 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 KIF16BQ96L93 1317 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 NLRP2Q9NX02 1062 aa15.28■□□□□ 0.04
GTF2A2-202ENST00000396060 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
GTF2A2-202ENST00000396060 MRPL50Q8N5N7 158 aaKnown RBP15.26■□□□□ 0.03
GTF2A2-202ENST00000396060 RAPGEF4Q8WZA2 1011 aa15.26■□□□□ 0.03
GTF2A2-202ENST00000396060 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
GTF2A2-202ENST00000396060 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
GTF2A2-202ENST00000396060 ADAMTS7Q9UKP4 1686 aa15.25■□□□□ 0.03
GTF2A2-202ENST00000396060 COL5A2P05997 1499 aaPredicted RBP15.25■□□□□ 0.03
GTF2A2-202ENST00000396060 CSB-PGBD3P0DP91 1061 aa15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 FRAT1Q92837 279 aaPredicted RBP15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 CARD10Q9BWT7 1032 aa15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 C1orf141Q5JVX7 400 aa15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
GTF2A2-202ENST00000396060 DZIP1LQ8IYY4 767 aaKnown RBP15.23■□□□□ 0.03
GTF2A2-202ENST00000396060 PANK1Q8TE04 598 aa15.23■□□□□ 0.03
GTF2A2-202ENST00000396060 RLBP1P12271 317 aa15.22■□□□□ 0.03
GTF2A2-202ENST00000396060 TRIM27P14373 513 aa15.22■□□□□ 0.03
GTF2A2-202ENST00000396060 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
GTF2A2-202ENST00000396060 COL16A1Q07092 1604 aaPredicted RBP15.22■□□□□ 0.03
GTF2A2-202ENST00000396060 MEGF6O75095 1541 aa15.21■□□□□ 0.03
GTF2A2-202ENST00000396060 PKD1L3Q7Z443 1732 aa15.21■□□□□ 0.03
GTF2A2-202ENST00000396060 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
GTF2A2-202ENST00000396060 MVPQ14764 893 aaKnown RBP15.2■□□□□ 0.02
GTF2A2-202ENST00000396060 CHMP4AQ9BY43 222 aa15.2■□□□□ 0.02
GTF2A2-202ENST00000396060 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
GTF2A2-202ENST00000396060 COL14A1Q05707 1796 aaKnown RBP15.2■□□□□ 0.02
GTF2A2-202ENST00000396060 HOXB7P09629 217 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 PHKG2P15735 406 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 IFNL2Q8IZJ0 200 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 HSP90AB1P08238 724 aaKnown RBP15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 TEFQ10587 303 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 MPRIPQ6WCQ1 1025 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 PHLPP1O60346 1717 aa15.19■□□□□ 0.02
GTF2A2-202ENST00000396060 KRT24Q2M2I5 525 aa15.18■□□□□ 0.02
GTF2A2-202ENST00000396060 FTSJ3Q8IY81 847 aaKnown RBP15.18■□□□□ 0.02
GTF2A2-202ENST00000396060 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
GTF2A2-202ENST00000396060 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
GTF2A2-202ENST00000396060 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
GTF2A2-202ENST00000396060 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
GTF2A2-202ENST00000396060 CACNA1FO60840 1977 aa15.17■□□□□ 0.02
GTF2A2-202ENST00000396060 HEG1Q9ULI3 1381 aa15.17■□□□□ 0.02
GTF2A2-202ENST00000396060 EVA1CP58658 441 aa15.17■□□□□ 0.02
GTF2A2-202ENST00000396060 EIF4A1P60842 406 aaKnown RBP15.17■□□□□ 0.02
GTF2A2-202ENST00000396060 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
GTF2A2-202ENST00000396060 SIPA1L3O60292 1781 aaPredicted RBP15.17■□□□□ 0.02
GTF2A2-202ENST00000396060 CYP27B1O15528 508 aa15.16■□□□□ 0.02
GTF2A2-202ENST00000396060 NKX1-1Q15270 411 aaPredicted RBP15.16■□□□□ 0.02
GTF2A2-202ENST00000396060 PARP4Q9UKK3 1724 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms