RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 IFT74Q96LB3 600 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 DHX37Q8IY37 1157 aaKnown RBP7.6□□□□□ -1.19
A1CF-206ENST00000395489 DDX12PQ92771 950 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 LIMCH1Q9UPQ0 1083 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 MAP3K1Q13233 1512 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 JMYQ8N9B5 988 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 CCDC148Q8NFR7 591 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 EXOC6Q8TAG9 804 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 SNX21Q969T3 373 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 XPCQ01831 940 aaPredicted RBP7.6□□□□□ -1.19
A1CF-206ENST00000395489 CCDC92Q53HC0 331 aaPredicted RBP7.6□□□□□ -1.19
A1CF-206ENST00000395489 PDILTQ8N807 584 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 STMN4Q9H169 189 aaPredicted RBP7.6□□□□□ -1.19
A1CF-206ENST00000395489 AIMP1Q12904 312 aaKnown RBP7.6□□□□□ -1.19
A1CF-206ENST00000395489 HDXQ7Z353 690 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 GDAP1L1Q96MZ0 367 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 HSP90AB4PQ58FF6 505 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 ITPRIPQ8IWB1 547 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 LRRFIP1Q32MZ4 808 aaKnown RBP7.6□□□□□ -1.19
A1CF-206ENST00000395489 PPP1R9BQ96SB3 815 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 MCTP2Q6DN12 878 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 TCP11Q8WWU5 503 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 FSD2A1L4K1 749 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 TNNT1P13805 278 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 TRAF1Q13077 416 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 TAX1BP1Q86VP1 789 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 CLASRPQ8N2M8 674 aaKnown RBP7.59□□□□□ -1.19
A1CF-206ENST00000395489 PIP4K2BP78356 416 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 SESN3P58005 492 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 RGS22Q8NE09 1264 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 TTC14Q96N46 770 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 TRIM6Q9C030 488 aaPredicted RBP7.59□□□□□ -1.19
A1CF-206ENST00000395489 DYNC1I2Q13409 638 aaKnown RBP7.59□□□□□ -1.19
A1CF-206ENST00000395489 IMMTQ16891 758 aaKnown RBP7.59□□□□□ -1.19
A1CF-206ENST00000395489 SCAND2PQ9GZW5 306 aaPredicted RBP7.59□□□□□ -1.19
A1CF-206ENST00000395489 VCX3BQ9H321 246 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 VCX3AQ9NNX9 186 aa7.59□□□□□ -1.19
A1CF-206ENST00000395489 MYO1BO43795 1136 aa7.59□□□□□ -1.2
A1CF-206ENST00000395489 CCDC175P0C221 793 aa7.59□□□□□ -1.2
A1CF-206ENST00000395489 CLNS1AP54105 237 aaKnown RBP7.59□□□□□ -1.2
A1CF-206ENST00000395489 EXOC4Q96A65 974 aa7.59□□□□□ -1.2
A1CF-206ENST00000395489 CUX2O14529 1486 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 CFAP45Q9UL16 551 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 ZFXP17010 805 aaPredicted RBP7.58□□□□□ -1.2
A1CF-206ENST00000395489 CCDC57Q2TAC2 916 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 CAMSAP2Q08AD1 1489 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 ZNF445P59923 1031 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
A1CF-206ENST00000395489 LZICQ8WZA0 190 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 H3BQV1 296 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 KIF5CO60282 957 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 MAGEA9P43362 315 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 ANKRD1Q15327 319 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 IFFO2Q5TF58 517 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 ISM2Q6H9L7 571 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 LARSQ9P2J5 1176 aaKnown RBP7.58□□□□□ -1.2
A1CF-206ENST00000395489 MAP3K11Q16584 847 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 C6orf163Q5TEZ5 329 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 PUS7Q96PZ0 661 aaKnown RBP7.58□□□□□ -1.2
A1CF-206ENST00000395489 DESP17661 470 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 GCKP35557 465 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 CCDC121Q6ZUS5 278 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 DONSONQ9NYP3 566 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 GCC1Q96CN9 775 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 BATF3Q9NR55 127 aa7.58□□□□□ -1.2
A1CF-206ENST00000395489 GRIPAP1Q4V328 841 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 PPP1R1BQ9UD71 204 aaPredicted RBP7.57□□□□□ -1.2
A1CF-206ENST00000395489 CLIP2Q9UDT6 1046 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 NEBLO76041 1014 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 NAA25Q14CX7 972 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 SEPT2Q15019 361 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 P3H4Q92791 437 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 THEGQ9P2T0 379 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 TPX2Q9ULW0 747 aaKnown RBP7.57□□□□□ -1.2
A1CF-206ENST00000395489 KRT85P78386 507 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 MCM6Q14566 821 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 C10orf67Q8IYJ2 551 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 OTUD6BQ8N6M0 293 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 ZNF396Q96N95 335 aaPredicted RBP7.57□□□□□ -1.2
A1CF-206ENST00000395489 CKAP4Q07065 602 aaKnown RBP7.57□□□□□ -1.2
A1CF-206ENST00000395489 CCDC174Q6PII3 467 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 FBF1Q8TES7 1133 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 UHRF1BP1LA0JNW5 1464 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 INPP5BP32019 993 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 ZSCAN26Q16670 478 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 CCHCR1Q8TD31 782 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 CRBNQ96SW2 442 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 PSMA5P28066 241 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 CEP57Q86XR8 500 aa7.57□□□□□ -1.2
A1CF-206ENST00000395489 CWC25Q9NXE8 425 aaPredicted RBP7.57□□□□□ -1.2
A1CF-206ENST00000395489 CROCCP2Q86T23 111 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 RPGRIP1Q96KN7 1286 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 CEP128Q6ZU80 1094 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 ZNF280CQ8ND82 737 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 SECISBP2LQ93073 1101 aaKnown RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 TBC1D32Q96NH3 1257 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 NAA15Q9BXJ9 866 aaKnown RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 DAAM1Q9Y4D1 1078 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 USP47Q96K76 1375 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 LRRC23Q53EV4 343 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms