RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 COL23A1Q86Y22 540 aaPredicted RBP19.25■□□□□ 0.67
CHCHD2-201ENST00000395422 TUBGCP6Q96RT7 1819 aa19.25■□□□□ 0.67
CHCHD2-201ENST00000395422 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
CHCHD2-201ENST00000395422 GRIN3BO60391 1043 aa19.23■□□□□ 0.67
CHCHD2-201ENST00000395422 FBLN1P23142 703 aa19.23■□□□□ 0.67
CHCHD2-201ENST00000395422 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
CHCHD2-201ENST00000395422 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
CHCHD2-201ENST00000395422 CCNL1Q9UK58 526 aaPredicted RBP19.23■□□□□ 0.67
CHCHD2-201ENST00000395422 ATP10DQ9P241 1426 aa19.22■□□□□ 0.67
CHCHD2-201ENST00000395422 MEGF6O75095 1541 aa19.21■□□□□ 0.67
CHCHD2-201ENST00000395422 MAP3K19Q56UN5 1328 aa19.21■□□□□ 0.67
CHCHD2-201ENST00000395422 MSH5O43196 834 aa19.2■□□□□ 0.66
CHCHD2-201ENST00000395422 ZCRB1Q8TBF4 217 aaKnown RBP19.2■□□□□ 0.66
CHCHD2-201ENST00000395422 KAT6BQ8WYB5 2073 aa19.2■□□□□ 0.66
CHCHD2-201ENST00000395422 DOT1LQ8TEK3 1739 aa19.2■□□□□ 0.66
CHCHD2-201ENST00000395422 HOXC9P31274 260 aa19.19■□□□□ 0.66
CHCHD2-201ENST00000395422 FAM208AQ9UK61 1670 aaKnown RBP19.19■□□□□ 0.66
CHCHD2-201ENST00000395422 LY75O60449 1722 aa19.19■□□□□ 0.66
CHCHD2-201ENST00000395422 CARD11Q9BXL7 1154 aa19.18■□□□□ 0.66
CHCHD2-201ENST00000395422 TERF2IPQ9NYB0 399 aa19.18■□□□□ 0.66
CHCHD2-201ENST00000395422 USP47Q96K76 1375 aa19.17■□□□□ 0.66
CHCHD2-201ENST00000395422 ADCY9O60503 1353 aa19.16■□□□□ 0.66
CHCHD2-201ENST00000395422 AMPHP49418 695 aa19.14■□□□□ 0.65
CHCHD2-201ENST00000395422 NBPF6Q5VWK0 638 aa19.14■□□□□ 0.65
CHCHD2-201ENST00000395422 USHBP1Q8N6Y0 703 aa19.14■□□□□ 0.65
CHCHD2-201ENST00000395422 NBPF4Q96M43 638 aa19.14■□□□□ 0.65
CHCHD2-201ENST00000395422 GPBP1L1Q9HC44 474 aaPredicted RBP19.14■□□□□ 0.65
CHCHD2-201ENST00000395422 CD2APQ9Y5K6 639 aa19.14■□□□□ 0.65
CHCHD2-201ENST00000395422 AMIGO3Q86WK7 504 aa19.13■□□□□ 0.65
CHCHD2-201ENST00000395422 COG3Q96JB2 828 aa19.13■□□□□ 0.65
CHCHD2-201ENST00000395422 ZNF526Q8TF50 670 aaPredicted RBP19.12■□□□□ 0.65
CHCHD2-201ENST00000395422 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
CHCHD2-201ENST00000395422 HSPA6P17066 643 aa19.11■□□□□ 0.65
CHCHD2-201ENST00000395422 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
CHCHD2-201ENST00000395422 SMIM5Q71RC9 77 aa19.1■□□□□ 0.65
CHCHD2-201ENST00000395422 WWC3Q9ULE0 1092 aa19.1■□□□□ 0.65
CHCHD2-201ENST00000395422 PALLDQ8WX93 1383 aa19.09■□□□□ 0.65
CHCHD2-201ENST00000395422 RGPD2P0DJD1 1756 aa19.09■□□□□ 0.65
CHCHD2-201ENST00000395422 RTL1A6NKG5 1358 aa19.08■□□□□ 0.65
CHCHD2-201ENST00000395422 TESK2Q96S53 571 aa19.08■□□□□ 0.64
CHCHD2-201ENST00000395422 CGNL1Q0VF96 1302 aa19.07■□□□□ 0.64
CHCHD2-201ENST00000395422 FLAD1Q8NFF5 587 aa19.07■□□□□ 0.64
CHCHD2-201ENST00000395422 IGSF1Q8N6C5 1336 aa19.06■□□□□ 0.64
CHCHD2-201ENST00000395422 C5P01031 1676 aa19.06■□□□□ 0.64
CHCHD2-201ENST00000395422 MPRIPQ6WCQ1 1025 aa19.06■□□□□ 0.64
CHCHD2-201ENST00000395422 RAPGEF4Q8WZA2 1011 aa19.06■□□□□ 0.64
CHCHD2-201ENST00000395422 CYP27B1O15528 508 aa19.05■□□□□ 0.64
CHCHD2-201ENST00000395422 TATP17735 454 aaPredicted RBP19.05■□□□□ 0.64
CHCHD2-201ENST00000395422 PCDH11XQ9BZA7 1347 aa19.04■□□□□ 0.64
CHCHD2-201ENST00000395422 PCDH11YQ9BZA8 1340 aa19.04■□□□□ 0.64
CHCHD2-201ENST00000395422 KIF3CO14782 793 aa19.04■□□□□ 0.64
CHCHD2-201ENST00000395422 PHF14O94880 888 aa19.04■□□□□ 0.64
CHCHD2-201ENST00000395422 HSP90AB2PQ58FF8 381 aa19.04■□□□□ 0.64
CHCHD2-201ENST00000395422 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
CHCHD2-201ENST00000395422 FYB1O15117 783 aa19.03■□□□□ 0.64
CHCHD2-201ENST00000395422 AK7Q96M32 723 aa19.03■□□□□ 0.64
CHCHD2-201ENST00000395422 TOGARAM1Q9Y4F4 1720 aa19.03■□□□□ 0.64
CHCHD2-201ENST00000395422 ST20-MTHFSA0A0A6YYL1 179 aa19.02■□□□□ 0.64
CHCHD2-201ENST00000395422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.02■□□□□ 0.64
CHCHD2-201ENST00000395422 C4BP0C0L5 1744 aa19.01■□□□□ 0.63
CHCHD2-201ENST00000395422 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
CHCHD2-201ENST00000395422 PIGBQ92521 554 aa19■□□□□ 0.63
CHCHD2-201ENST00000395422 INSRP06213 1382 aa19■□□□□ 0.63
CHCHD2-201ENST00000395422 LINC00116Q8NCU8 138 aa18.99■□□□□ 0.63
CHCHD2-201ENST00000395422 TAF1LQ8IZX4 1826 aa18.98■□□□□ 0.63
CHCHD2-201ENST00000395422 SMARCC1Q92922 1105 aaPredicted RBP18.98■□□□□ 0.63
CHCHD2-201ENST00000395422 SSFA2P28290 1259 aa18.97■□□□□ 0.63
CHCHD2-201ENST00000395422 FLT4P35916 1363 aa18.96■□□□□ 0.63
CHCHD2-201ENST00000395422 LOC102724428A0A0B4J2F2 783 aa18.96■□□□□ 0.63
CHCHD2-201ENST00000395422 HMGB2P26583 209 aaKnown RBP18.96■□□□□ 0.63
CHCHD2-201ENST00000395422 SIK1P57059 783 aa18.96■□□□□ 0.63
CHCHD2-201ENST00000395422 ITPK1Q13572 414 aa18.95■□□□□ 0.62
CHCHD2-201ENST00000395422 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
CHCHD2-201ENST00000395422 CICQ96RK0 1608 aaPredicted RBP18.94■□□□□ 0.62
CHCHD2-201ENST00000395422 NKX1-1Q15270 411 aaPredicted RBP18.94■□□□□ 0.62
CHCHD2-201ENST00000395422 UBR3Q6ZT12 1888 aa18.94■□□□□ 0.62
CHCHD2-201ENST00000395422 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
CHCHD2-201ENST00000395422 PXDNLA1KZ92 1463 aa18.93■□□□□ 0.62
CHCHD2-201ENST00000395422 DNAJC5GQ8N7S2 189 aa18.93■□□□□ 0.62
CHCHD2-201ENST00000395422 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
CHCHD2-201ENST00000395422 GNPATO15228 680 aa18.92■□□□□ 0.62
CHCHD2-201ENST00000395422 MMP10P09238 476 aa18.92■□□□□ 0.62
CHCHD2-201ENST00000395422 ASAP1Q9ULH1 1129 aa18.92■□□□□ 0.62
CHCHD2-201ENST00000395422 KIF24Q5T7B8 1368 aa18.92■□□□□ 0.62
CHCHD2-201ENST00000395422 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
CHCHD2-201ENST00000395422 MAP2P11137 1827 aaKnown RBP18.91■□□□□ 0.62
CHCHD2-201ENST00000395422 APLP1P51693 650 aa18.91■□□□□ 0.62
CHCHD2-201ENST00000395422 PKD1L3Q7Z443 1732 aa18.89■□□□□ 0.61
CHCHD2-201ENST00000395422 ITGB4P16144 1822 aa18.89■□□□□ 0.61
CHCHD2-201ENST00000395422 ATP6V1AP38606 617 aa18.89■□□□□ 0.61
CHCHD2-201ENST00000395422 A0A0G2JLW4 131 aa18.88■□□□□ 0.61
CHCHD2-201ENST00000395422 TOMM70O94826 608 aa18.88■□□□□ 0.61
CHCHD2-201ENST00000395422 NMRK2Q9NPI5 230 aa18.88■□□□□ 0.61
CHCHD2-201ENST00000395422 TMOD3Q9NYL9 352 aa18.88■□□□□ 0.61
CHCHD2-201ENST00000395422 BCS1LQ9Y276 419 aa18.88■□□□□ 0.61
CHCHD2-201ENST00000395422 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
CHCHD2-201ENST00000395422 CARD14Q9BXL6 1004 aa18.87■□□□□ 0.61
CHCHD2-201ENST00000395422 ATG3Q9NT62 314 aa18.87■□□□□ 0.61
CHCHD2-201ENST00000395422 SPG7Q9UQ90 795 aa18.87■□□□□ 0.61
CHCHD2-201ENST00000395422 KIAA1551Q9HCM1 1747 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms