RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 OFD1O75665 1012 aa19.49■□□□□ 0.71
PDZD4-202ENST00000393758 CHAF1AQ13111 956 aaPredicted RBP19.49■□□□□ 0.71
PDZD4-202ENST00000393758 LRRCC1Q9C099 1032 aa19.49■□□□□ 0.71
PDZD4-202ENST00000393758 SURF6O75683 361 aaKnown RBP19.49■□□□□ 0.71
PDZD4-202ENST00000393758 USP25Q9UHP3 1055 aa19.49■□□□□ 0.71
PDZD4-202ENST00000393758 NPATQ14207 1427 aa19.49■□□□□ 0.71
PDZD4-202ENST00000393758 SPC24Q8NBT2 197 aa19.48■□□□□ 0.71
PDZD4-202ENST00000393758 NUDT16Q96DE0 195 aaKnown RBP19.48■□□□□ 0.71
PDZD4-202ENST00000393758 TMEM63CQ9P1W3 806 aa19.48■□□□□ 0.71
PDZD4-202ENST00000393758 IQGAP1P46940 1657 aa19.48■□□□□ 0.71
PDZD4-202ENST00000393758 NGDNQ8NEJ9 315 aaKnown RBP19.47■□□□□ 0.71
PDZD4-202ENST00000393758 NAP1L2Q9ULW6 460 aaPredicted RBP19.47■□□□□ 0.71
PDZD4-202ENST00000393758 SMC3Q9UQE7 1217 aa19.47■□□□□ 0.71
PDZD4-202ENST00000393758 LRSAM1Q6UWE0 723 aa19.46■□□□□ 0.71
PDZD4-202ENST00000393758 PDE1AP54750 535 aa19.46■□□□□ 0.71
PDZD4-202ENST00000393758 GPT2Q8TD30 523 aa19.46■□□□□ 0.71
PDZD4-202ENST00000393758 MAP3K4Q9Y6R4 1608 aa19.45■□□□□ 0.7
PDZD4-202ENST00000393758 ABCA6Q8N139 1617 aa19.45■□□□□ 0.7
PDZD4-202ENST00000393758 MX1P20591 662 aa19.45■□□□□ 0.7
PDZD4-202ENST00000393758 RNF17Q9BXT8 1623 aaKnown RBP19.45■□□□□ 0.7
PDZD4-202ENST00000393758 FAM177BA6PVY3 158 aa19.45■□□□□ 0.7
PDZD4-202ENST00000393758 G2E3Q7L622 706 aa19.45■□□□□ 0.7
PDZD4-202ENST00000393758 NSFL1CQ9UNZ2 370 aaKnown RBP19.45■□□□□ 0.7
PDZD4-202ENST00000393758 FOXO3O43524 673 aa19.44■□□□□ 0.7
PDZD4-202ENST00000393758 UBTFL1P0CB47 393 aaPredicted RBP19.44■□□□□ 0.7
PDZD4-202ENST00000393758 MYOM2P54296 1465 aa19.44■□□□□ 0.7
PDZD4-202ENST00000393758 HSP90AB2PQ58FF8 381 aa19.44■□□□□ 0.7
PDZD4-202ENST00000393758 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
PDZD4-202ENST00000393758 FGD1P98174 961 aa19.44■□□□□ 0.7
PDZD4-202ENST00000393758 ZKSCAN5Q9Y2L8 839 aa19.44■□□□□ 0.7
PDZD4-202ENST00000393758 PPP1R9BQ96SB3 815 aa19.43■□□□□ 0.7
PDZD4-202ENST00000393758 LMOD2Q6P5Q4 547 aa19.43■□□□□ 0.7
PDZD4-202ENST00000393758 DIAPH3Q9NSV4 1193 aa19.43■□□□□ 0.7
PDZD4-202ENST00000393758 ZNF445P59923 1031 aa19.43■□□□□ 0.7
PDZD4-202ENST00000393758 CCDC61Q9Y6R9 512 aa19.43■□□□□ 0.7
PDZD4-202ENST00000393758 ZFYVE16Q7Z3T8 1539 aa19.42■□□□□ 0.7
PDZD4-202ENST00000393758 IL13P35225 146 aa19.42■□□□□ 0.7
PDZD4-202ENST00000393758 PUS7Q96PZ0 661 aaKnown RBP19.42■□□□□ 0.7
PDZD4-202ENST00000393758 ABCC4O15439 1325 aa19.42■□□□□ 0.7
PDZD4-202ENST00000393758 IQSEC2Q5JU85 1478 aa19.42■□□□□ 0.7
PDZD4-202ENST00000393758 MSH6P52701 1360 aa19.42■□□□□ 0.7
PDZD4-202ENST00000393758 MCM2P49736 904 aa19.42■□□□□ 0.7
PDZD4-202ENST00000393758 CWC27Q6UX04 472 aaKnown RBP19.42■□□□□ 0.7
PDZD4-202ENST00000393758 TTC12Q9H892 705 aaPredicted RBP19.42■□□□□ 0.7
PDZD4-202ENST00000393758 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
PDZD4-202ENST00000393758 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
PDZD4-202ENST00000393758 C17orf53Q8N3J3 647 aaPredicted RBP19.41■□□□□ 0.7
PDZD4-202ENST00000393758 TSC1Q92574 1164 aa19.41■□□□□ 0.7
PDZD4-202ENST00000393758 CCT4P50991 539 aaKnown RBP19.41■□□□□ 0.7
PDZD4-202ENST00000393758 LRRFIP2Q9Y608 721 aaKnown RBP19.41■□□□□ 0.7
PDZD4-202ENST00000393758 GNAI3P08754 354 aa19.41■□□□□ 0.7
PDZD4-202ENST00000393758 CCDC9Q9Y3X0 531 aaKnown RBP19.41■□□□□ 0.7
PDZD4-202ENST00000393758 DDIT3P35638 169 aa19.4■□□□□ 0.7
PDZD4-202ENST00000393758 NOL7Q9UMY1 257 aaKnown RBP19.4■□□□□ 0.7
PDZD4-202ENST00000393758 WDR33Q9C0J8 1336 aaKnown RBP19.4■□□□□ 0.7
PDZD4-202ENST00000393758 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
PDZD4-202ENST00000393758 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.7
PDZD4-202ENST00000393758 CEP152O94986 1710 aa19.39■□□□□ 0.69
PDZD4-202ENST00000393758 GADD45BO75293 160 aaPredicted RBP19.39■□□□□ 0.69
PDZD4-202ENST00000393758 USP48Q86UV5 1035 aa19.39■□□□□ 0.69
PDZD4-202ENST00000393758 FERMT3Q86UX7 667 aa19.39■□□□□ 0.69
PDZD4-202ENST00000393758 ESYT1Q9BSJ8 1104 aa19.39■□□□□ 0.69
PDZD4-202ENST00000393758 PALD1Q9ULE6 856 aa19.39■□□□□ 0.69
PDZD4-202ENST00000393758 SPG7Q9UQ90 795 aa19.38■□□□□ 0.69
PDZD4-202ENST00000393758 EIF4A2Q14240 407 aaKnown RBP19.38■□□□□ 0.69
PDZD4-202ENST00000393758 MAP7D2Q96T17 732 aa19.38■□□□□ 0.69
PDZD4-202ENST00000393758 FOSBP53539 338 aa19.37■□□□□ 0.69
PDZD4-202ENST00000393758 CNPY2Q9Y2B0 182 aa19.37■□□□□ 0.69
PDZD4-202ENST00000393758 TET3O43151 1660 aa19.37■□□□□ 0.69
PDZD4-202ENST00000393758 KIF1BO60333 1816 aa19.37■□□□□ 0.69
PDZD4-202ENST00000393758 MYOM1P52179 1685 aa19.37■□□□□ 0.69
PDZD4-202ENST00000393758 SASS6Q6UVJ0 657 aa19.37■□□□□ 0.69
PDZD4-202ENST00000393758 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
PDZD4-202ENST00000393758 CPA1P15085 419 aa19.36■□□□□ 0.69
PDZD4-202ENST00000393758 CCDC83Q8IWF9 413 aa19.36■□□□□ 0.69
PDZD4-202ENST00000393758 ATP6V1DQ9Y5K8 247 aa19.36■□□□□ 0.69
PDZD4-202ENST00000393758 SRGAP3O43295 1099 aa19.36■□□□□ 0.69
PDZD4-202ENST00000393758 ADCY5O95622 1261 aa19.36■□□□□ 0.69
PDZD4-202ENST00000393758 CCDC30Q5VVM6 783 aa19.36■□□□□ 0.69
PDZD4-202ENST00000393758 GIMAP6Q6P9H5 292 aa19.36■□□□□ 0.69
PDZD4-202ENST00000393758 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.36■□□□□ 0.69
PDZD4-202ENST00000393758 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
PDZD4-202ENST00000393758 YTHDC2Q9H6S0 1430 aaKnown RBP19.35■□□□□ 0.69
PDZD4-202ENST00000393758 CAMK4Q16566 473 aa19.35■□□□□ 0.69
PDZD4-202ENST00000393758 FBXW7Q969H0 707 aa19.35■□□□□ 0.69
PDZD4-202ENST00000393758 AK9Q5TCS8 1911 aa19.35■□□□□ 0.69
PDZD4-202ENST00000393758 FLIIQ13045 1269 aa19.35■□□□□ 0.69
PDZD4-202ENST00000393758 HDGFL1Q5TGJ6 251 aa19.35■□□□□ 0.69
PDZD4-202ENST00000393758 CBX1P83916 185 aa19.34■□□□□ 0.69
PDZD4-202ENST00000393758 CASTP20810 708 aaKnown RBP19.34■□□□□ 0.69
PDZD4-202ENST00000393758 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
PDZD4-202ENST00000393758 ZHX1Q9UKY1 873 aaPredicted RBP19.34■□□□□ 0.69
PDZD4-202ENST00000393758 RIMS2Q9UQ26 1411 aa19.34■□□□□ 0.69
PDZD4-202ENST00000393758 ZCCHC11Q5TAX3 1644 aaKnown RBP19.33■□□□□ 0.69
PDZD4-202ENST00000393758 PNMA6EA0A0J9YXQ4 647 aa19.33■□□□□ 0.68
PDZD4-202ENST00000393758 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.68
PDZD4-202ENST00000393758 ZDHHC9Q9Y397 364 aa19.33■□□□□ 0.68
PDZD4-202ENST00000393758 PTPRCP08575 1304 aa19.33■□□□□ 0.68
PDZD4-202ENST00000393758 GOLGA6L6A8MZA4 724 aa19.33■□□□□ 0.68
PDZD4-202ENST00000393758 NLRP6P59044 892 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms