RNA–Protein interactions for RNA: ENST00000392202.7

PIKFYVE-203, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 2,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-203ENST00000392202 SPATA31A6Q5VVP1 1343 aa28.85■■■□□ 2.21
PIKFYVE-203ENST00000392202 CRB1P82279 1406 aa28.84■■■□□ 2.21
PIKFYVE-203ENST00000392202 EVA1CP58658 441 aa28.84■■■□□ 2.21
PIKFYVE-203ENST00000392202 PLEKHO1Q53GL0 409 aaPredicted RBP28.84■■■□□ 2.21
PIKFYVE-203ENST00000392202 TOM1L2Q6ZVM7 507 aa28.84■■■□□ 2.21
PIKFYVE-203ENST00000392202 HTATSF1O43719 755 aaKnown RBP28.84■■■□□ 2.21
PIKFYVE-203ENST00000392202 STRN4Q9NRL3 753 aa28.84■■■□□ 2.21
PIKFYVE-203ENST00000392202 LRP6O75581 1613 aa28.83■■■□□ 2.21
PIKFYVE-203ENST00000392202 RAPGEF4Q8WZA2 1011 aa28.83■■■□□ 2.21
PIKFYVE-203ENST00000392202 MAP3K5Q99683 1374 aa28.83■■■□□ 2.21
PIKFYVE-203ENST00000392202 LARP1Q6PKG0 1096 aaKnown RBP28.82■■■□□ 2.2
PIKFYVE-203ENST00000392202 MYH16Q9H6N6 1097 aa28.82■■■□□ 2.2
PIKFYVE-203ENST00000392202 TATP17735 454 aaPredicted RBP28.81■■■□□ 2.2
PIKFYVE-203ENST00000392202 THUMPD2Q9BTF0 503 aaKnown RBP28.81■■■□□ 2.2
PIKFYVE-203ENST00000392202 SLIT2O94813 1529 aa28.8■■■□□ 2.2
PIKFYVE-203ENST00000392202 GNAT3A8MTJ3 354 aa28.8■■■□□ 2.2
PIKFYVE-203ENST00000392202 DCTN1Q14203 1278 aa28.79■■■□□ 2.2
PIKFYVE-203ENST00000392202 OVOS2A0A0G2JMS6 1433 aa28.79■■■□□ 2.2
PIKFYVE-203ENST00000392202 RTF1Q92541 710 aaKnown RBP28.79■■■□□ 2.2
PIKFYVE-203ENST00000392202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.79■■■□□ 2.21e-6■■□□□ 13.1
PIKFYVE-203ENST00000392202 VIRMAQ69YN4 1812 aaKnown RBP28.78■■■□□ 2.2
PIKFYVE-203ENST00000392202 IFT57Q9NWB7 429 aa28.77■■■□□ 2.2
PIKFYVE-203ENST00000392202 ZNF530Q6P9A1 599 aaPredicted RBP28.77■■■□□ 2.2
PIKFYVE-203ENST00000392202 MCM10Q7L590 875 aa28.77■■■□□ 2.2
PIKFYVE-203ENST00000392202 FANCIQ9NVI1 1328 aa28.77■■■□□ 2.2
PIKFYVE-203ENST00000392202 WNK3Q9BYP7 1800 aa28.76■■■□□ 2.2
PIKFYVE-203ENST00000392202 ZNF853P0CG23 659 aa28.76■■■□□ 2.19
PIKFYVE-203ENST00000392202 AKAP4Q5JQC9 854 aa28.76■■■□□ 2.19
PIKFYVE-203ENST00000392202 ADAMTS7Q9UKP4 1686 aa28.76■■■□□ 2.19
PIKFYVE-203ENST00000392202 GNAI1P63096 354 aa28.75■■■□□ 2.19
PIKFYVE-203ENST00000392202 RCAN3Q9UKA8 241 aa28.74■■■□□ 2.19
PIKFYVE-203ENST00000392202 SUPT16HQ9Y5B9 1047 aaKnown RBP28.74■■■□□ 2.19
PIKFYVE-203ENST00000392202 SPG7Q9UQ90 795 aa28.74■■■□□ 2.19
PIKFYVE-203ENST00000392202 CFAP44Q96MT7 982 aa28.73■■■□□ 2.19
PIKFYVE-203ENST00000392202 TSR2Q969E8 191 aaKnown RBP28.72■■■□□ 2.19
PIKFYVE-203ENST00000392202 C1orf141Q5JVX7 400 aa28.72■■■□□ 2.19
PIKFYVE-203ENST00000392202 SHANK3Q9BYB0 1731 aa28.71■■■□□ 2.19
PIKFYVE-203ENST00000392202 CEMIPQ8WUJ3 1361 aa28.71■■■□□ 2.19
PIKFYVE-203ENST00000392202 IL2RBP14784 551 aa28.71■■■□□ 2.19
PIKFYVE-203ENST00000392202 IL17REQ8NFR9 667 aa28.7■■■□□ 2.19
PIKFYVE-203ENST00000392202 C8orf37Q96NL8 207 aa28.7■■■□□ 2.19
PIKFYVE-203ENST00000392202 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.7■■■□□ 2.18
PIKFYVE-203ENST00000392202 DISP2A7MBM2 1401 aa28.7■■■□□ 2.18
PIKFYVE-203ENST00000392202 RNF123Q5XPI4 1314 aa28.69■■■□□ 2.18
PIKFYVE-203ENST00000392202 SCN11AQ9UI33 1791 aa28.69■■■□□ 2.18
PIKFYVE-203ENST00000392202 LAS1LQ9Y4W2 734 aaKnown RBP28.69■■■□□ 2.18
PIKFYVE-203ENST00000392202 FBXO41Q8TF61 875 aa28.67■■■□□ 2.18
PIKFYVE-203ENST00000392202 NGLY1Q96IV0 654 aa28.67■■■□□ 2.18
PIKFYVE-203ENST00000392202 MBIPQ9NS73 344 aa28.67■■■□□ 2.18
PIKFYVE-203ENST00000392202 CHL1O00533 1208 aa28.66■■■□□ 2.18
PIKFYVE-203ENST00000392202 PHKG2P15735 406 aa28.66■■■□□ 2.18
PIKFYVE-203ENST00000392202 SIPA1L3O60292 1781 aaPredicted RBP28.66■■■□□ 2.18
PIKFYVE-203ENST00000392202 CT47B1P0C2W7 299 aaPredicted RBP28.65■■■□□ 2.18
PIKFYVE-203ENST00000392202 FNBP4Q8N3X1 1017 aaPredicted RBP28.65■■■□□ 2.18
PIKFYVE-203ENST00000392202 BCL9LQ86UU0 1499 aa28.65■■■□□ 2.18
PIKFYVE-203ENST00000392202 EXOSC9Q06265 439 aaKnown RBP28.65■■■□□ 2.18
PIKFYVE-203ENST00000392202 IFNL2Q8IZJ0 200 aa28.65■■■□□ 2.18
PIKFYVE-203ENST00000392202 MEX3CQ5U5Q3 659 aaKnown RBP28.64■■■□□ 2.18
PIKFYVE-203ENST00000392202 SPATA31A1Q5TZJ5 1347 aa28.64■■■□□ 2.18
PIKFYVE-203ENST00000392202 RNMTO43148 476 aaKnown RBP28.64■■■□□ 2.17
PIKFYVE-203ENST00000392202 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.17
PIKFYVE-203ENST00000392202 ZCRB1Q8TBF4 217 aaKnown RBP28.64■■■□□ 2.17
PIKFYVE-203ENST00000392202 USP35Q9P2H5 1018 aa28.64■■■□□ 2.17
PIKFYVE-203ENST00000392202 LGR6Q9HBX8 967 aa28.63■■■□□ 2.17
PIKFYVE-203ENST00000392202 BABAM1Q9NWV8 329 aa28.63■■■□□ 2.17
PIKFYVE-203ENST00000392202 THRAP3Q9Y2W1 955 aaKnown RBP28.63■■■□□ 2.17
PIKFYVE-203ENST00000392202 PCDH11XQ9BZA7 1347 aa28.63■■■□□ 2.17
PIKFYVE-203ENST00000392202 PCDH11YQ9BZA8 1340 aa28.63■■■□□ 2.17
PIKFYVE-203ENST00000392202 CYP27B1O15528 508 aa28.62■■■□□ 2.17
PIKFYVE-203ENST00000392202 MPRIPQ6WCQ1 1025 aa28.62■■■□□ 2.17
PIKFYVE-203ENST00000392202 SPATA31A5Q5VU36 1347 aa28.62■■■□□ 2.17
PIKFYVE-203ENST00000392202 SPATA31A7Q8IWB4 1347 aa28.62■■■□□ 2.17
PIKFYVE-203ENST00000392202 KDM6AO15550 1401 aaPredicted RBP28.62■■■□□ 2.17
PIKFYVE-203ENST00000392202 GTF3C3Q9Y5Q9 886 aa28.61■■■□□ 2.17
PIKFYVE-203ENST00000392202 KDM3BQ7LBC6 1761 aa28.61■■■□□ 2.17
PIKFYVE-203ENST00000392202 HSP90AB1P08238 724 aaKnown RBP28.6■■■□□ 2.17
PIKFYVE-203ENST00000392202 TAF7Q15545 349 aaPredicted RBP28.6■■■□□ 2.17
PIKFYVE-203ENST00000392202 MRC1P22897 1456 aa28.59■■■□□ 2.17
PIKFYVE-203ENST00000392202 CDCA7Q9BWT1 371 aaPredicted RBP28.58■■■□□ 2.17
PIKFYVE-203ENST00000392202 TSPYL4Q9UJ04 414 aa28.58■■■□□ 2.17
PIKFYVE-203ENST00000392202 NEFLP07196 543 aa28.57■■■□□ 2.16
PIKFYVE-203ENST00000392202 RRP1P56182 461 aaKnown RBP28.57■■■□□ 2.16
PIKFYVE-203ENST00000392202 VPS72Q15906 364 aa28.57■■■□□ 2.16
PIKFYVE-203ENST00000392202 TEFQ10587 303 aa28.56■■■□□ 2.16
PIKFYVE-203ENST00000392202 DCAF5Q96JK2 942 aa28.56■■■□□ 2.16
PIKFYVE-203ENST00000392202 USP21Q9UK80 565 aa28.55■■■□□ 2.16
PIKFYVE-203ENST00000392202 TNS2Q63HR2 1409 aa28.55■■■□□ 2.16
PIKFYVE-203ENST00000392202 AFF2P51816 1311 aa28.55■■■□□ 2.16
PIKFYVE-203ENST00000392202 RARSP54136 660 aaKnown RBP28.55■■■□□ 2.16
PIKFYVE-203ENST00000392202 BARGINQ6ZT62 677 aa28.55■■■□□ 2.16
PIKFYVE-203ENST00000392202 NKX1-1Q15270 411 aaPredicted RBP28.54■■■□□ 2.16
PIKFYVE-203ENST00000392202 MIS18AQ9NYP9 233 aa28.53■■■□□ 2.16
PIKFYVE-203ENST00000392202 CCDC9Q9Y3X0 531 aaKnown RBP28.53■■■□□ 2.16
PIKFYVE-203ENST00000392202 ZNF428Q96B54 188 aa28.53■■■□□ 2.16
PIKFYVE-203ENST00000392202 C8orf58Q8NAV2 365 aa28.52■■■□□ 2.16
PIKFYVE-203ENST00000392202 VAMP4O75379 141 aa28.5■■■□□ 2.15
PIKFYVE-203ENST00000392202 TSPYL6Q8N831 410 aa28.5■■■□□ 2.15
PIKFYVE-203ENST00000392202 TOGARAM1Q9Y4F4 1720 aa28.5■■■□□ 2.15
PIKFYVE-203ENST00000392202 TWISTNBQ3B726 338 aaPredicted RBP28.5■■■□□ 2.15
PIKFYVE-203ENST00000392202 BCAR3O75815 825 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms