RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 ZCRB1Q8TBF4 217 aaKnown RBP17.87■□□□□ 0.45
MRPL55-219ENST00000391867 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
MRPL55-219ENST00000391867 TATP17735 454 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-219ENST00000391867 NCAPD2Q15021 1401 aa17.84■□□□□ 0.45
MRPL55-219ENST00000391867 PSDA5PKW4 1024 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-219ENST00000391867 NHSQ6T4R5 1651 aa17.83■□□□□ 0.45
MRPL55-219ENST00000391867 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.45
MRPL55-219ENST00000391867 MTHFSP49914 203 aa17.83■□□□□ 0.44
MRPL55-219ENST00000391867 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
MRPL55-219ENST00000391867 PARD3Q8TEW0 1356 aa17.81■□□□□ 0.44
MRPL55-219ENST00000391867 NPC1L1Q9UHC9 1359 aa17.81■□□□□ 0.44
MRPL55-219ENST00000391867 RREB1Q92766 1687 aa17.81■□□□□ 0.44
MRPL55-219ENST00000391867 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-219ENST00000391867 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
MRPL55-219ENST00000391867 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
MRPL55-219ENST00000391867 PCDH11XQ9BZA7 1347 aa17.8■□□□□ 0.44
MRPL55-219ENST00000391867 PCDH11YQ9BZA8 1340 aa17.8■□□□□ 0.44
MRPL55-219ENST00000391867 AEBP1Q8IUX7 1158 aa17.8■□□□□ 0.44
MRPL55-219ENST00000391867 CYP27B1O15528 508 aa17.79■□□□□ 0.44
MRPL55-219ENST00000391867 PRIM1P49642 420 aaKnown RBP17.79■□□□□ 0.44
MRPL55-219ENST00000391867 R3HDM1Q15032 1099 aaKnown RBP17.79■□□□□ 0.44
MRPL55-219ENST00000391867 BTAF1O14981 1849 aa17.79■□□□□ 0.44
MRPL55-219ENST00000391867 PKD1L3Q7Z443 1732 aa17.78■□□□□ 0.44
MRPL55-219ENST00000391867 PLSCR1O15162 318 aa17.78■□□□□ 0.44
MRPL55-219ENST00000391867 IL13P35225 146 aa17.78■□□□□ 0.44
MRPL55-219ENST00000391867 PROM2Q8N271 834 aa17.77■□□□□ 0.44
MRPL55-219ENST00000391867 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
MRPL55-219ENST00000391867 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
MRPL55-219ENST00000391867 SPG7Q9UQ90 795 aa17.76■□□□□ 0.43
MRPL55-219ENST00000391867 TXNRD1Q16881 649 aa17.75■□□□□ 0.43
MRPL55-219ENST00000391867 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
MRPL55-219ENST00000391867 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-219ENST00000391867 TOGARAM1Q9Y4F4 1720 aa17.73■□□□□ 0.43
MRPL55-219ENST00000391867 HMOX1P09601 288 aa17.73■□□□□ 0.43
MRPL55-219ENST00000391867 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-219ENST00000391867 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
MRPL55-219ENST00000391867 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
MRPL55-219ENST00000391867 NBPF14Q5TI25 921 aa17.72■□□□□ 0.43
MRPL55-219ENST00000391867 PHKG2P15735 406 aa17.71■□□□□ 0.43
MRPL55-219ENST00000391867 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-219ENST00000391867 KCNQ4P56696 695 aa17.71■□□□□ 0.43
MRPL55-219ENST00000391867 MPRIPQ6WCQ1 1025 aa17.71■□□□□ 0.43
MRPL55-219ENST00000391867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.43
MRPL55-219ENST00000391867 PPP2R1AP30153 589 aa17.7■□□□□ 0.42
MRPL55-219ENST00000391867 KDRP35968 1356 aa17.69■□□□□ 0.42
MRPL55-219ENST00000391867 U2SURPO15042 1029 aaKnown RBP17.69■□□□□ 0.42
MRPL55-219ENST00000391867 PLEKHO1Q53GL0 409 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-219ENST00000391867 ZNF530Q6P9A1 599 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-219ENST00000391867 IFNL2Q8IZJ0 200 aa17.69■□□□□ 0.42
MRPL55-219ENST00000391867 LRRC4BQ9NT99 713 aa17.69■□□□□ 0.42
MRPL55-219ENST00000391867 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-219ENST00000391867 ITGB4P16144 1822 aa17.67■□□□□ 0.42
MRPL55-219ENST00000391867 PIGBQ92521 554 aa17.66■□□□□ 0.42
MRPL55-219ENST00000391867 AMOTQ4VCS5 1084 aa17.65■□□□□ 0.42
MRPL55-219ENST00000391867 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
MRPL55-219ENST00000391867 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
MRPL55-219ENST00000391867 STK32BQ9NY57 414 aa17.65■□□□□ 0.42
MRPL55-219ENST00000391867 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
MRPL55-219ENST00000391867 PLEKHG2Q9H7P9 1386 aa17.65■□□□□ 0.42
MRPL55-219ENST00000391867 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.42
MRPL55-219ENST00000391867 LY75O60449 1722 aa17.64■□□□□ 0.41
MRPL55-219ENST00000391867 ZNF827Q17R98 1081 aa17.64■□□□□ 0.41
MRPL55-219ENST00000391867 C1orf141Q5JVX7 400 aa17.64■□□□□ 0.41
MRPL55-219ENST00000391867 CCNL1Q9UK58 526 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-219ENST00000391867 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
MRPL55-219ENST00000391867 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
MRPL55-219ENST00000391867 SLC15A2Q16348 729 aa17.62■□□□□ 0.41
MRPL55-219ENST00000391867 SLC27A3Q5K4L6 730 aa17.62■□□□□ 0.41
MRPL55-219ENST00000391867 DCAF5Q96JK2 942 aa17.61■□□□□ 0.41
MRPL55-219ENST00000391867 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
MRPL55-219ENST00000391867 HSP90AB1P08238 724 aaKnown RBP17.6■□□□□ 0.41
MRPL55-219ENST00000391867 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
MRPL55-219ENST00000391867 LRP5O75197 1615 aa17.6■□□□□ 0.41
MRPL55-219ENST00000391867 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
MRPL55-219ENST00000391867 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
MRPL55-219ENST00000391867 CASZ1Q86V15 1759 aa17.58■□□□□ 0.41
MRPL55-219ENST00000391867 ZBTB7AO95365 584 aa17.58■□□□□ 0.4
MRPL55-219ENST00000391867 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
MRPL55-219ENST00000391867 CABP4P57796 275 aa17.58■□□□□ 0.4
MRPL55-219ENST00000391867 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
MRPL55-219ENST00000391867 SMARCC1Q92922 1105 aaPredicted RBP17.58■□□□□ 0.4
MRPL55-219ENST00000391867 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
MRPL55-219ENST00000391867 NUDCQ9Y266 331 aa17.58■□□□□ 0.4
MRPL55-219ENST00000391867 ERVV-2B6SEH9 535 aa17.57■□□□□ 0.4
MRPL55-219ENST00000391867 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
MRPL55-219ENST00000391867 ATG3Q9NT62 314 aa17.57■□□□□ 0.4
MRPL55-219ENST00000391867 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
MRPL55-219ENST00000391867 LGR6Q9HBX8 967 aa17.56■□□□□ 0.4
MRPL55-219ENST00000391867 TFCP2L1Q9NZI6 479 aa17.56■□□□□ 0.4
MRPL55-219ENST00000391867 C5P01031 1676 aa17.55■□□□□ 0.4
MRPL55-219ENST00000391867 LOC102724428A0A0B4J2F2 783 aa17.55■□□□□ 0.4
MRPL55-219ENST00000391867 SIK1P57059 783 aa17.55■□□□□ 0.4
MRPL55-219ENST00000391867 RALBP1Q15311 655 aa17.55■□□□□ 0.4
MRPL55-219ENST00000391867 NFATC2IPQ8NCF5 419 aa17.55■□□□□ 0.4
MRPL55-219ENST00000391867 TUBGCP6Q96RT7 1819 aa17.55■□□□□ 0.4
MRPL55-219ENST00000391867 SCN11AQ9UI33 1791 aa17.54■□□□□ 0.4
MRPL55-219ENST00000391867 SPON1Q9HCB6 807 aa17.54■□□□□ 0.4
MRPL55-219ENST00000391867 ATF5Q9Y2D1 282 aaPredicted RBP17.54■□□□□ 0.4
MRPL55-219ENST00000391867 PNPLA7Q6ZV29 1317 aa17.53■□□□□ 0.4
MRPL55-219ENST00000391867 RNMTO43148 476 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms