RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 ANKRD36BQ8N2N9 1353 aa12.33□□□□□ -0.44
PKP4-201ENST00000389757 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
PKP4-201ENST00000389757 C19orf44Q9H6X5 657 aa12.33□□□□□ -0.44
PKP4-201ENST00000389757 MYD88Q99836 296 aa12.32□□□□□ -0.44
PKP4-201ENST00000389757 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
PKP4-201ENST00000389757 CCDC73Q6ZRK6 1079 aa12.32□□□□□ -0.44
PKP4-201ENST00000389757 RAI14Q9P0K7 980 aa12.32□□□□□ -0.44
PKP4-201ENST00000389757 METTL24Q5JXM2 366 aa12.32□□□□□ -0.44
PKP4-201ENST00000389757 DISP3Q9P2K9 1392 aa12.31□□□□□ -0.44
PKP4-201ENST00000389757 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
PKP4-201ENST00000389757 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
PKP4-201ENST00000389757 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
PKP4-201ENST00000389757 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
PKP4-201ENST00000389757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
PKP4-201ENST00000389757 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
PKP4-201ENST00000389757 LRP2BPQ9P2M1 347 aa12.31□□□□□ -0.44
PKP4-201ENST00000389757 NEK4P51957 841 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 PDE4CQ08493 712 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 MCM2P49736 904 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
PKP4-201ENST00000389757 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
PKP4-201ENST00000389757 ZSCAN29Q8IWY8 852 aaPredicted RBP12.3□□□□□ -0.44
PKP4-201ENST00000389757 AK7Q96M32 723 aa12.3□□□□□ -0.44
PKP4-201ENST00000389757 CHD1LQ86WJ1 897 aa12.29□□□□□ -0.44
PKP4-201ENST00000389757 TMOD2Q9NZR1 351 aa12.29□□□□□ -0.44
PKP4-201ENST00000389757 KDM4AO75164 1064 aa12.29□□□□□ -0.44
PKP4-201ENST00000389757 IFIT1P09914 478 aaKnown RBP12.29□□□□□ -0.44
PKP4-201ENST00000389757 MAP4K4O95819 1239 aaPredicted RBP12.29□□□□□ -0.44
PKP4-201ENST00000389757 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
PKP4-201ENST00000389757 RABEP1Q15276 862 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 PDCP20941 246 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
PKP4-201ENST00000389757 CAVIN4Q5BKX8 364 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
PKP4-201ENST00000389757 TDO2P48775 406 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 CTNNA3Q9UI47 895 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 KIF1BPQ96EK5 621 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 C8orf37Q96NL8 207 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 ATP10AO60312 1499 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 SHANK2Q9UPX8 1470 aa12.28□□□□□ -0.44
PKP4-201ENST00000389757 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.44
PKP4-201ENST00000389757 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.44
PKP4-201ENST00000389757 RPGRQ92834 1020 aaKnown RBP12.27□□□□□ -0.44
PKP4-201ENST00000389757 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.44
PKP4-201ENST00000389757 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.44
PKP4-201ENST00000389757 ABCF2Q9UG63 623 aa12.27□□□□□ -0.44
PKP4-201ENST00000389757 DISP1Q96F81 1524 aa12.27□□□□□ -0.45
PKP4-201ENST00000389757 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
PKP4-201ENST00000389757 TBX22Q9Y458 520 aa12.27□□□□□ -0.45
PKP4-201ENST00000389757 ANKIB1Q9P2G1 1089 aa12.27□□□□□ -0.45
PKP4-201ENST00000389757 EXOC6BQ9Y2D4 811 aa12.27□□□□□ -0.45
PKP4-201ENST00000389757 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 ZBTB3Q9H5J0 574 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 KCNA6P17658 529 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 ATP2B1P20020 1258 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 IPO7O95373 1038 aaKnown RBP12.26□□□□□ -0.45
PKP4-201ENST00000389757 ANKRD1Q15327 319 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 SASS6Q6UVJ0 657 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 TRIM22Q8IYM9 498 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 CCDC69A6NI79 296 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 RARSP54136 660 aaKnown RBP12.26□□□□□ -0.45
PKP4-201ENST00000389757 UHRF1BP1Q6BDS2 1440 aa12.26□□□□□ -0.45
PKP4-201ENST00000389757 A0A087WZG4 1122 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 SNRPA1P09661 255 aaKnown RBP12.25□□□□□ -0.45
PKP4-201ENST00000389757 GPTP24298 496 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 LRRC59Q96AG4 307 aaKnown RBP12.25□□□□□ -0.45
PKP4-201ENST00000389757 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 F6X3S4 739 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 FLIIQ13045 1269 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 PBRM1Q86U86 1689 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
PKP4-201ENST00000389757 R3HCC1Q9Y3T6 440 aaKnown RBP12.24□□□□□ -0.45
PKP4-201ENST00000389757 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 DDB1Q16531 1140 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 FBLN1P23142 703 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 RFC4P35249 363 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 PRM3Q9NNZ6 103 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 PTPRCP08575 1304 aa12.24□□□□□ -0.45
PKP4-201ENST00000389757 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
PKP4-201ENST00000389757 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
PKP4-201ENST00000389757 NUP133Q8WUM0 1156 aa12.23□□□□□ -0.45
PKP4-201ENST00000389757 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
PKP4-201ENST00000389757 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
PKP4-201ENST00000389757 SDF4Q9BRK5 362 aa12.23□□□□□ -0.45
PKP4-201ENST00000389757 NKTRP30414 1462 aaKnown RBP12.23□□□□□ -0.45
PKP4-201ENST00000389757 SLC5A1P13866 664 aa12.23□□□□□ -0.45
PKP4-201ENST00000389757 CDK5RAP3Q96JB5 506 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms