RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 IDI1Q13907 227 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 BLOC1S2Q6QNY1 142 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 ZHX3Q9H4I2 956 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 SNRKQ9NRH2 765 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 PPP1R1BQ9UD71 204 aaPredicted RBP5.94□□□□□ -1.46
LTN1-202ENST00000389194 TRERF1Q96PN7 1200 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 USP25Q9UHP3 1055 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 CCDC173Q0VFZ6 552 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 OLFM4Q6UX06 510 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 SPATA32Q96LK8 384 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 CCT4P50991 539 aaKnown RBP5.94□□□□□ -1.46
LTN1-202ENST00000389194 HSP90AA4PQ58FG1 418 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 ABCF2Q9UG63 623 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 AEBP1Q8IUX7 1158 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 TRMT1Q9NXH9 659 aaKnown RBP5.93□□□□□ -1.46
LTN1-202ENST00000389194 BIN1O00499 593 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 LRRFIP1Q32MZ4 808 aaKnown RBP5.93□□□□□ -1.46
LTN1-202ENST00000389194 TCEAL9Q9UHQ7 104 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 CC2D2AQ9P2K1 1620 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 MBD3O95983 291 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 MX1P20591 662 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 CBX1P83916 185 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 DHX8Q14562 1220 aaKnown RBP5.93□□□□□ -1.46
LTN1-202ENST00000389194 FCHSD2O94868 740 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 HAND2P61296 217 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 MEX3CQ5U5Q3 659 aaKnown RBP5.93□□□□□ -1.46
LTN1-202ENST00000389194 NECAB1Q8N987 351 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 MYD88Q99836 296 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 CAMSAP2Q08AD1 1489 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 NCOA1Q15788 1441 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 CAGE1Q8TC20 777 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 TRMT1LQ7Z2T5 733 aaKnown RBP5.93□□□□□ -1.46
LTN1-202ENST00000389194 MEIS3Q99687 375 aa5.93□□□□□ -1.46
LTN1-202ENST00000389194 NKTRP30414 1462 aaKnown RBP5.92□□□□□ -1.46
LTN1-202ENST00000389194 TPM2P07951 284 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 TATP17735 454 aaPredicted RBP5.92□□□□□ -1.46
LTN1-202ENST00000389194 GPTP24298 496 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 KLHL10Q6JEL2 608 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 AMOTL1Q8IY63 956 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 MBIPQ9NS73 344 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 CCDC61Q9Y6R9 512 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 FAM193AP78312 1265 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 PIP4K2BP78356 416 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 ZFYVE27Q5T4F4 411 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 TSPYL6Q8N831 410 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 ZFP91Q96JP5 570 aaPredicted RBP5.92□□□□□ -1.46
LTN1-202ENST00000389194 WDR33Q9C0J8 1336 aaKnown RBP5.92□□□□□ -1.46
LTN1-202ENST00000389194 CCDC192P0DO97 292 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 KRT85P78386 507 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 HSP90AB2PQ58FF8 381 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 ANKRD20A12PQ8NF67 263 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 GNAT3A8MTJ3 354 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 CCDC57Q2TAC2 916 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 TBC1D2BQ9UPU7 963 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 MAPKBP1O60336 1514 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 PLEKHH2Q8IVE3 1493 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 CCDC158Q5M9N0 1113 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 KIF6Q6ZMV9 814 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 DMRT2Q9Y5R5 561 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 DNA2P51530 1060 aa5.92□□□□□ -1.46
LTN1-202ENST00000389194 ZBTB3Q9H5J0 574 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 PRDM11Q9NQV5 511 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 SPDYE4A6NLX3 237 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 MINDY4BA8MYZ0 360 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 SSBP05455 408 aaKnown RBP eCLIP5.91□□□□□ -1.46
LTN1-202ENST00000389194 CHRNA2Q15822 529 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 LRPPRCP42704 1394 aaKnown RBP5.91□□□□□ -1.46
LTN1-202ENST00000389194 OFD1O75665 1012 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 C8orf58Q8NAV2 365 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 NAT10Q9H0A0 1025 aaKnown RBP5.91□□□□□ -1.46
LTN1-202ENST00000389194 NUP62CLQ9H1M0 184 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 RAB11FIP3O75154 756 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 HOOK1Q9UJC3 728 aaKnown RBP5.91□□□□□ -1.46
LTN1-202ENST00000389194 HECW1Q76N89 1606 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 ENOX2Q16206 610 aaKnown RBP5.91□□□□□ -1.46
LTN1-202ENST00000389194 HSP90AB3PQ58FF7 597 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 C16orf45Q96MC5 204 aaPredicted RBP5.91□□□□□ -1.46
LTN1-202ENST00000389194 IBSPP21815 317 aaPredicted RBP5.91□□□□□ -1.46
LTN1-202ENST00000389194 GIMAP6Q6P9H5 292 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 MPHOSPH8Q99549 860 aa5.91□□□□□ -1.46
LTN1-202ENST00000389194 SLC39A6Q13433 755 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 C8orf34Q49A92 452 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 PI4KAP2A4QPH2 592 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 POLR3DP05423 398 aaPredicted RBP5.9□□□□□ -1.46
LTN1-202ENST00000389194 PDCP20941 246 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 EPS15P42566 896 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 TDO2P48775 406 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 PI4KAP1Q8N8J0 262 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 CENPHQ9H3R5 247 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 CTDP1Q9Y5B0 961 aaPredicted RBP5.9□□□□□ -1.46
LTN1-202ENST00000389194 ATAD2Q6PL18 1390 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 NOS1P29475 1434 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 CPA1P15085 419 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 CHST3Q7LGC8 479 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 CPLX3Q8WVH0 158 aa5.9□□□□□ -1.46
LTN1-202ENST00000389194 THOC2Q8NI27 1593 aaKnown RBP5.9□□□□□ -1.47
LTN1-202ENST00000389194 CCDC43Q96MW1 224 aaKnown RBP5.9□□□□□ -1.47
LTN1-202ENST00000389194 CWC22Q9HCG8 908 aaKnown RBP5.9□□□□□ -1.47
LTN1-202ENST00000389194 IQSEC3Q9UPP2 1182 aaPredicted RBP5.9□□□□□ -1.47
LTN1-202ENST00000389194 IGSF3O75054 1194 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms