RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
RNVU1-17-201ENST00000384619 ATRNO75882 1429 aa13.09□□□□□ -0.31
RNVU1-17-201ENST00000384619 LMOD3Q0VAK6 560 aa13.09□□□□□ -0.31
RNVU1-17-201ENST00000384619 FAM98CQ17RN3 349 aaKnown RBP13.09□□□□□ -0.31
RNVU1-17-201ENST00000384619 C1orf141Q5JVX7 400 aa13.09□□□□□ -0.31
RNVU1-17-201ENST00000384619 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
RNVU1-17-201ENST00000384619 LTN1O94822 1766 aa13.08□□□□□ -0.32
RNVU1-17-201ENST00000384619 HSP90AB1P08238 724 aaKnown RBP13.08□□□□□ -0.32
RNVU1-17-201ENST00000384619 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
RNVU1-17-201ENST00000384619 NFE2L2Q16236 605 aa13.08□□□□□ -0.32
RNVU1-17-201ENST00000384619 DDB1Q16531 1140 aa13.08□□□□□ -0.32
RNVU1-17-201ENST00000384619 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
RNVU1-17-201ENST00000384619 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
RNVU1-17-201ENST00000384619 A0A0G2JS52 829 aa13.07□□□□□ -0.32
RNVU1-17-201ENST00000384619 RIPK4P57078 832 aa13.07□□□□□ -0.32
RNVU1-17-201ENST00000384619 MYT1Q01538 1121 aa13.07□□□□□ -0.32
RNVU1-17-201ENST00000384619 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
RNVU1-17-201ENST00000384619 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
RNVU1-17-201ENST00000384619 RTF1Q92541 710 aaKnown RBP13.07□□□□□ -0.32
RNVU1-17-201ENST00000384619 NWD2Q9ULI1 1742 aa13.06□□□□□ -0.32
RNVU1-17-201ENST00000384619 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
RNVU1-17-201ENST00000384619 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
RNVU1-17-201ENST00000384619 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
RNVU1-17-201ENST00000384619 RGS17Q9UGC6 210 aaPredicted RBP13.06□□□□□ -0.32
RNVU1-17-201ENST00000384619 PCDH11XQ9BZA7 1347 aa13.06□□□□□ -0.32
RNVU1-17-201ENST00000384619 PCDH11YQ9BZA8 1340 aa13.06□□□□□ -0.32
RNVU1-17-201ENST00000384619 CALD1Q05682 793 aaKnown RBP13.05□□□□□ -0.32
RNVU1-17-201ENST00000384619 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
RNVU1-17-201ENST00000384619 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
RNVU1-17-201ENST00000384619 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
RNVU1-17-201ENST00000384619 OVOS2A0A0G2JMS6 1433 aa13.05□□□□□ -0.32
RNVU1-17-201ENST00000384619 PHKG2P15735 406 aa13.04□□□□□ -0.32
RNVU1-17-201ENST00000384619 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
RNVU1-17-201ENST00000384619 DCAF5Q96JK2 942 aa13.04□□□□□ -0.32
RNVU1-17-201ENST00000384619 DISP2A7MBM2 1401 aa13.04□□□□□ -0.32
RNVU1-17-201ENST00000384619 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
RNVU1-17-201ENST00000384619 POTEAQ6S8J7 498 aa13.03□□□□□ -0.32
RNVU1-17-201ENST00000384619 PLCH1Q4KWH8 1693 aa13.02□□□□□ -0.32
RNVU1-17-201ENST00000384619 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
RNVU1-17-201ENST00000384619 CYP27B1O15528 508 aa13.02□□□□□ -0.33
RNVU1-17-201ENST00000384619 RRP7AQ9Y3A4 280 aaKnown RBP13.02□□□□□ -0.33
RNVU1-17-201ENST00000384619 MEGF6O75095 1541 aa13.02□□□□□ -0.33
RNVU1-17-201ENST00000384619 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
RNVU1-17-201ENST00000384619 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
RNVU1-17-201ENST00000384619 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
RNVU1-17-201ENST00000384619 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
RNVU1-17-201ENST00000384619 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
RNVU1-17-201ENST00000384619 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
RNVU1-17-201ENST00000384619 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 TEFQ10587 303 aa12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
RNVU1-17-201ENST00000384619 TNS2Q63HR2 1409 aa12.98□□□□□ -0.33
RNVU1-17-201ENST00000384619 CABP4P57796 275 aa12.98□□□□□ -0.33
RNVU1-17-201ENST00000384619 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
RNVU1-17-201ENST00000384619 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
RNVU1-17-201ENST00000384619 IL16Q14005 1332 aa12.97□□□□□ -0.33
RNVU1-17-201ENST00000384619 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
RNVU1-17-201ENST00000384619 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
RNVU1-17-201ENST00000384619 MCM10Q7L590 875 aa12.97□□□□□ -0.33
RNVU1-17-201ENST00000384619 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
RNVU1-17-201ENST00000384619 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
RNVU1-17-201ENST00000384619 GNAI1P63096 354 aa12.96□□□□□ -0.33
RNVU1-17-201ENST00000384619 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
RNVU1-17-201ENST00000384619 RGPD5Q99666 1765 aa12.96□□□□□ -0.34
RNVU1-17-201ENST00000384619 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
RNVU1-17-201ENST00000384619 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
RNVU1-17-201ENST00000384619 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
RNVU1-17-201ENST00000384619 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
RNVU1-17-201ENST00000384619 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 GLI3P10071 1580 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 ZNF521Q96K83 1311 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 E9PSI1 815 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 TMOD3Q9NYL9 352 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 BCL9O00512 1426 aa12.94□□□□□ -0.34
RNVU1-17-201ENST00000384619 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
RNVU1-17-201ENST00000384619 CHL1O00533 1208 aa12.93□□□□□ -0.34
RNVU1-17-201ENST00000384619 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
RNVU1-17-201ENST00000384619 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
RNVU1-17-201ENST00000384619 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
RNVU1-17-201ENST00000384619 HMGB2P26583 209 aaKnown RBP12.92□□□□□ -0.34
RNVU1-17-201ENST00000384619 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
RNVU1-17-201ENST00000384619 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
RNVU1-17-201ENST00000384619 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
RNVU1-17-201ENST00000384619 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
RNVU1-17-201ENST00000384619 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
RNVU1-17-201ENST00000384619 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
RNVU1-17-201ENST00000384619 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
RNVU1-17-201ENST00000384619 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
RNVU1-17-201ENST00000384619 TTC5Q8N0Z6 440 aa12.9□□□□□ -0.34
RNVU1-17-201ENST00000384619 PIGBQ92521 554 aa12.9□□□□□ -0.34
RNVU1-17-201ENST00000384619 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
RNVU1-17-201ENST00000384619 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms