RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 IL27Q8NEV9 243 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 ADAMTSL3P82987 1691 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 SETD1BQ9UPS6 1966 aaKnown RBP21.79■■□□□ 1.08
PDX1-201ENST00000381033 HOXC9P31274 260 aa21.79■■□□□ 1.08
PDX1-201ENST00000381033 USHBP1Q8N6Y0 703 aa21.79■■□□□ 1.08
PDX1-201ENST00000381033 ANKARQ7Z5J8 1434 aa21.79■■□□□ 1.08
PDX1-201ENST00000381033 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
PDX1-201ENST00000381033 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
PDX1-201ENST00000381033 MARF1Q9Y4F3 1742 aaKnown RBP21.77■■□□□ 1.07
PDX1-201ENST00000381033 CHL1O00533 1208 aa21.76■■□□□ 1.07
PDX1-201ENST00000381033 BRPF1P55201 1214 aaPredicted RBP21.76■■□□□ 1.07
PDX1-201ENST00000381033 ZBTB7BO15156 539 aaPredicted RBP21.75■■□□□ 1.07
PDX1-201ENST00000381033 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
PDX1-201ENST00000381033 ZNF428Q96B54 188 aa21.75■■□□□ 1.07
PDX1-201ENST00000381033 VSIG10Q8N0Z9 540 aa21.74■■□□□ 1.07
PDX1-201ENST00000381033 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
PDX1-201ENST00000381033 PSME1Q06323 249 aa21.74■■□□□ 1.07
PDX1-201ENST00000381033 ZNF142P52746 1687 aaPredicted RBP21.73■■□□□ 1.07
PDX1-201ENST00000381033 HDAC1Q13547 482 aaPredicted RBP21.73■■□□□ 1.07
PDX1-201ENST00000381033 USP19O94966 1318 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 CRB1P82279 1406 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 KDRP35968 1356 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
PDX1-201ENST00000381033 HOMEZQ8IX15 550 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 TULP1O00294 542 aaPredicted RBP21.71■■□□□ 1.07
PDX1-201ENST00000381033 LMOD2Q6P5Q4 547 aa21.7■■□□□ 1.06
PDX1-201ENST00000381033 RTF1Q92541 710 aaKnown RBP21.7■■□□□ 1.06
PDX1-201ENST00000381033 ARHGAP45Q92619 1136 aa21.7■■□□□ 1.06
PDX1-201ENST00000381033 ABCC4O15439 1325 aa21.7■■□□□ 1.06
PDX1-201ENST00000381033 SIRT2Q8IXJ6 389 aa21.69■■□□□ 1.06
PDX1-201ENST00000381033 ADGRL3Q9HAR2 1447 aa21.69■■□□□ 1.06
PDX1-201ENST00000381033 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
PDX1-201ENST00000381033 LNPKQ9C0E8 428 aa21.68■■□□□ 1.06
PDX1-201ENST00000381033 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
PDX1-201ENST00000381033 NWD1Q149M9 1564 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 LRRC59Q96AG4 307 aaKnown RBP21.66■■□□□ 1.06
PDX1-201ENST00000381033 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 G2E3Q7L622 706 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 SLC4A2P04920 1241 aa21.65■■□□□ 1.06
PDX1-201ENST00000381033 PROSER2Q86WR7 435 aaPredicted RBP21.65■■□□□ 1.06
PDX1-201ENST00000381033 IL17REQ8NFR9 667 aa21.65■■□□□ 1.06
PDX1-201ENST00000381033 DDX17Q92841 729 aaKnown RBP21.64■■□□□ 1.06
PDX1-201ENST00000381033 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
PDX1-201ENST00000381033 LTN1O94822 1766 aa21.63■■□□□ 1.05
PDX1-201ENST00000381033 API5Q9BZZ5 524 aaKnown RBP21.63■■□□□ 1.05
PDX1-201ENST00000381033 VIRMAQ69YN4 1812 aaKnown RBP21.63■■□□□ 1.05
PDX1-201ENST00000381033 RGS12O14924 1447 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 F6X3S4 739 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 IP6K1Q92551 441 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 NUCB1Q02818 461 aa21.61■■□□□ 1.05
PDX1-201ENST00000381033 ANKRD45Q5TZF3 282 aa21.61■■□□□ 1.05
PDX1-201ENST00000381033 DDRGK1Q96HY6 314 aa21.61■■□□□ 1.05
PDX1-201ENST00000381033 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
PDX1-201ENST00000381033 GCP02774 474 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 CHD1LQ86WJ1 897 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 MSH6P52701 1360 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 NFAT5O94916 1531 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 HSPA2P54652 639 aa21.58■■□□□ 1.05
PDX1-201ENST00000381033 SLC4A10Q6U841 1118 aa21.58■■□□□ 1.04
PDX1-201ENST00000381033 LGR6Q9HBX8 967 aa21.58■■□□□ 1.04
PDX1-201ENST00000381033 RGPD2P0DJD1 1756 aa21.57■■□□□ 1.04
PDX1-201ENST00000381033 MEIS3Q99687 375 aa21.57■■□□□ 1.04
PDX1-201ENST00000381033 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
PDX1-201ENST00000381033 INTS3Q68E01 1043 aaKnown RBP21.56■■□□□ 1.04
PDX1-201ENST00000381033 KIF24Q5T7B8 1368 aa21.56■■□□□ 1.04
PDX1-201ENST00000381033 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
PDX1-201ENST00000381033 KRT28Q7Z3Y7 464 aa21.55■■□□□ 1.04
PDX1-201ENST00000381033 MAP3K5Q99683 1374 aa21.55■■□□□ 1.04
PDX1-201ENST00000381033 MFAP1P55081 439 aaKnown RBP21.54■■□□□ 1.04
PDX1-201ENST00000381033 ZC3H6P61129 1189 aaKnown RBP21.53■■□□□ 1.04
PDX1-201ENST00000381033 CHMP4AQ9BY43 222 aa21.53■■□□□ 1.04
PDX1-201ENST00000381033 ARHGEF25Q86VW2 580 aa21.53■■□□□ 1.04
PDX1-201ENST00000381033 KCNH5Q8NCM2 988 aa21.53■■□□□ 1.04
PDX1-201ENST00000381033 APBB1O00213 710 aa21.52■■□□□ 1.04
PDX1-201ENST00000381033 DHX37Q8IY37 1157 aaKnown RBP21.52■■□□□ 1.04
PDX1-201ENST00000381033 C19orf44Q9H6X5 657 aa21.52■■□□□ 1.04
PDX1-201ENST00000381033 KCNQ3O43525 872 aa21.52■■□□□ 1.03
PDX1-201ENST00000381033 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
PDX1-201ENST00000381033 RTL1A6NKG5 1358 aa21.51■■□□□ 1.03
PDX1-201ENST00000381033 MPRIPQ6WCQ1 1025 aa21.51■■□□□ 1.03
PDX1-201ENST00000381033 C16orf71Q8IYS4 520 aaPredicted RBP21.51■■□□□ 1.03
PDX1-201ENST00000381033 TBC1D32Q96NH3 1257 aa21.51■■□□□ 1.03
PDX1-201ENST00000381033 C1orf167Q5SNV9 1468 aa21.5■■□□□ 1.03
PDX1-201ENST00000381033 HTATSF1O43719 755 aaKnown RBP21.5■■□□□ 1.03
PDX1-201ENST00000381033 GCC1Q96CN9 775 aa21.5■■□□□ 1.03
PDX1-201ENST00000381033 PTPRCP08575 1304 aa21.5■■□□□ 1.03
PDX1-201ENST00000381033 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
PDX1-201ENST00000381033 TMEM94Q12767 1356 aa21.49■■□□□ 1.03
PDX1-201ENST00000381033 CABLES1Q8TDN4 633 aa21.49■■□□□ 1.03
PDX1-201ENST00000381033 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
PDX1-201ENST00000381033 ANKRD24Q8TF21 1146 aa21.49■■□□□ 1.03
PDX1-201ENST00000381033 ATP10DQ9P241 1426 aa21.48■■□□□ 1.03
PDX1-201ENST00000381033 CEP85Q6P2H3 762 aa21.48■■□□□ 1.03
PDX1-201ENST00000381033 FLIIQ13045 1269 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms