RNA–Protein interactions for RNA: ENST00000380751.9

SERF1B-202, Transcript of small EDRK-rich factor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1B, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-202ENST00000380751 TMF1P82094 1093 aa24.42■■□□□ 1.5
SERF1B-202ENST00000380751 USHBP1Q8N6Y0 703 aa24.41■■□□□ 1.5
SERF1B-202ENST00000380751 SLC16A10Q8TF71 515 aa24.4■■□□□ 1.5
SERF1B-202ENST00000380751 TFCP2L1Q9NZI6 479 aa24.4■■□□□ 1.5
SERF1B-202ENST00000380751 PNPLA7Q6ZV29 1317 aa24.39■■□□□ 1.5
SERF1B-202ENST00000380751 FAM208AQ9UK61 1670 aaKnown RBP24.38■■□□□ 1.49
SERF1B-202ENST00000380751 MEGF6O75095 1541 aa24.38■■□□□ 1.49
SERF1B-202ENST00000380751 NSD2O96028 1365 aa24.38■■□□□ 1.49
SERF1B-202ENST00000380751 ZNF784Q8NCA9 323 aaPredicted RBP24.37■■□□□ 1.49
SERF1B-202ENST00000380751 UTRNP46939 3433 aa24.37■■□□□ 1.49
SERF1B-202ENST00000380751 HSP90AB2PQ58FF8 381 aa24.36■■□□□ 1.49
SERF1B-202ENST00000380751 RTL1A6NKG5 1358 aa24.36■■□□□ 1.49
SERF1B-202ENST00000380751 USP47Q96K76 1375 aa24.36■■□□□ 1.49
SERF1B-202ENST00000380751 MAP3K5Q99683 1374 aa24.35■■□□□ 1.49
SERF1B-202ENST00000380751 POLD1P28340 1107 aa24.35■■□□□ 1.49
SERF1B-202ENST00000380751 KLHL34Q8N239 644 aa24.35■■□□□ 1.49
SERF1B-202ENST00000380751 RAPGEF4Q8WZA2 1011 aa24.35■■□□□ 1.49
SERF1B-202ENST00000380751 CCNL1Q9UK58 526 aaPredicted RBP24.35■■□□□ 1.49
SERF1B-202ENST00000380751 RGPD2P0DJD1 1756 aa24.34■■□□□ 1.49
SERF1B-202ENST00000380751 TATP17735 454 aaPredicted RBP24.33■■□□□ 1.49
SERF1B-202ENST00000380751 GPR162Q16538 588 aa24.33■■□□□ 1.49
SERF1B-202ENST00000380751 CGNL1Q0VF96 1302 aa24.33■■□□□ 1.48
SERF1B-202ENST00000380751 CDCA8Q53HL2 280 aa24.31■■□□□ 1.48
SERF1B-202ENST00000380751 DOT1LQ8TEK3 1739 aa24.3■■□□□ 1.48
SERF1B-202ENST00000380751 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
SERF1B-202ENST00000380751 TRIM26Q12899 539 aaPredicted RBP24.3■■□□□ 1.48
SERF1B-202ENST00000380751 CARD14Q9BXL6 1004 aa24.3■■□□□ 1.48
SERF1B-202ENST00000380751 INSRP06213 1382 aa24.29■■□□□ 1.48
SERF1B-202ENST00000380751 SHANK3Q9BYB0 1731 aa24.29■■□□□ 1.48
SERF1B-202ENST00000380751 COL23A1Q86Y22 540 aaPredicted RBP24.28■■□□□ 1.48
SERF1B-202ENST00000380751 PELP1Q8IZL8 1130 aaKnown RBP24.27■■□□□ 1.48
SERF1B-202ENST00000380751 FLT4P35916 1363 aa24.27■■□□□ 1.48
SERF1B-202ENST00000380751 NLGN2Q8NFZ4 835 aa24.26■■□□□ 1.47
SERF1B-202ENST00000380751 EMILIN1Q9Y6C2 1016 aa24.26■■□□□ 1.47
SERF1B-202ENST00000380751 LY75O60449 1722 aa24.26■■□□□ 1.47
SERF1B-202ENST00000380751 QSER1Q2KHR3 1735 aa24.25■■□□□ 1.47
SERF1B-202ENST00000380751 MPRIPQ6WCQ1 1025 aa24.25■■□□□ 1.47
SERF1B-202ENST00000380751 PCDH11XQ9BZA7 1347 aa24.25■■□□□ 1.47
SERF1B-202ENST00000380751 PCDH11YQ9BZA8 1340 aa24.25■■□□□ 1.47
SERF1B-202ENST00000380751 CYP27B1O15528 508 aa24.24■■□□□ 1.47
SERF1B-202ENST00000380751 PPM1GO15355 546 aaPredicted RBP24.23■■□□□ 1.47
SERF1B-202ENST00000380751 KIF24Q5T7B8 1368 aa24.23■■□□□ 1.47
SERF1B-202ENST00000380751 MSL1Q68DK7 614 aa24.21■■□□□ 1.47
SERF1B-202ENST00000380751 TUBGCP6Q96RT7 1819 aa24.21■■□□□ 1.47
SERF1B-202ENST00000380751 NSD3Q9BZ95 1437 aa24.2■■□□□ 1.46
SERF1B-202ENST00000380751 COL24A1Q17RW2 1714 aa24.2■■□□□ 1.46
SERF1B-202ENST00000380751 PALLDQ8WX93 1383 aa24.19■■□□□ 1.46
SERF1B-202ENST00000380751 CHD4Q14839 1912 aa24.18■■□□□ 1.46
SERF1B-202ENST00000380751 KIF20BQ96Q89 1820 aa24.17■■□□□ 1.46
SERF1B-202ENST00000380751 WASHC2AQ641Q2 1341 aa24.16■■□□□ 1.46
SERF1B-202ENST00000380751 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
SERF1B-202ENST00000380751 FLAD1Q8NFF5 587 aa24.16■■□□□ 1.46
SERF1B-202ENST00000380751 PIGBQ92521 554 aa24.16■■□□□ 1.46
SERF1B-202ENST00000380751 SMARCC1Q92922 1105 aaPredicted RBP24.16■■□□□ 1.46
SERF1B-202ENST00000380751 YBX3P16989 372 aaKnown RBP eCLIP24.15■■□□□ 1.46
SERF1B-202ENST00000380751 C1QTNF8P60827 252 aa24.15■■□□□ 1.46
SERF1B-202ENST00000380751 NKX1-1Q15270 411 aaPredicted RBP24.15■■□□□ 1.46
SERF1B-202ENST00000380751 EYA1Q99502 592 aa24.15■■□□□ 1.46
SERF1B-202ENST00000380751 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
SERF1B-202ENST00000380751 TIMELESSQ9UNS1 1208 aa24.14■■□□□ 1.45
SERF1B-202ENST00000380751 SMIM5Q71RC9 77 aa24.13■■□□□ 1.45
SERF1B-202ENST00000380751 POLR3GLQ9BT43 218 aa24.13■■□□□ 1.45
SERF1B-202ENST00000380751 POLKQ9UBT6 870 aa24.13■■□□□ 1.45
SERF1B-202ENST00000380751 GRIN3BO60391 1043 aa24.12■■□□□ 1.45
SERF1B-202ENST00000380751 AMIGO3Q86WK7 504 aa24.12■■□□□ 1.45
SERF1B-202ENST00000380751 AK7Q96M32 723 aa24.12■■□□□ 1.45
SERF1B-202ENST00000380751 GOLGB1Q14789 3259 aaKnown RBP24.11■■□□□ 1.45
SERF1B-202ENST00000380751 CD2APQ9Y5K6 639 aa24.1■■□□□ 1.45
SERF1B-202ENST00000380751 NCAPD2Q15021 1401 aa24.1■■□□□ 1.45
SERF1B-202ENST00000380751 C5P01031 1676 aa24.09■■□□□ 1.45
SERF1B-202ENST00000380751 SENP3-EIF4A1A0A087X0R7 540 aa24.09■■□□□ 1.45
SERF1B-202ENST00000380751 PHF14O94880 888 aa24.09■■□□□ 1.45
SERF1B-202ENST00000380751 TNNT2P45379 298 aaPredicted RBP24.09■■□□□ 1.45
SERF1B-202ENST00000380751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.09■■□□□ 1.45
SERF1B-202ENST00000380751 TOGARAM1Q9Y4F4 1720 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.07■■□□□ 1.44
SERF1B-202ENST00000380751 LOC102724428A0A0B4J2F2 783 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 SIK1P57059 783 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 IFNL2Q8IZJ0 200 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 LINC00116Q8NCU8 138 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 PCGF6Q9BYE7 350 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 TMOD3Q9NYL9 352 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 ASAP1Q9ULH1 1129 aa24.07■■□□□ 1.44
SERF1B-202ENST00000380751 PHKG2P15735 406 aa24.06■■□□□ 1.44
SERF1B-202ENST00000380751 GIGYF1O75420 1035 aaPredicted RBP24.05■■□□□ 1.44
SERF1B-202ENST00000380751 EIF4A2Q14240 407 aaKnown RBP24.05■■□□□ 1.44
SERF1B-202ENST00000380751 ITGB4P16144 1822 aa24.05■■□□□ 1.44
SERF1B-202ENST00000380751 PKD1L3Q7Z443 1732 aa24.04■■□□□ 1.44
SERF1B-202ENST00000380751 TAF1LQ8IZX4 1826 aa24.04■■□□□ 1.44
SERF1B-202ENST00000380751 C4BP0C0L5 1744 aa24.04■■□□□ 1.44
SERF1B-202ENST00000380751 ATP6V1AP38606 617 aa24.03■■□□□ 1.44
SERF1B-202ENST00000380751 ITPK1Q13572 414 aa24.03■■□□□ 1.44
SERF1B-202ENST00000380751 SSFA2P28290 1259 aa24.02■■□□□ 1.44
SERF1B-202ENST00000380751 ATG3Q9NT62 314 aa24.02■■□□□ 1.44
SERF1B-202ENST00000380751 MAP2P11137 1827 aaKnown RBP24.01■■□□□ 1.43
SERF1B-202ENST00000380751 ANKRD26Q9UPS8 1709 aa23.99■■□□□ 1.43
SERF1B-202ENST00000380751 GNPATO15228 680 aa23.99■■□□□ 1.43
SERF1B-202ENST00000380751 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
SERF1B-202ENST00000380751 PANK3Q9H999 370 aa23.99■■□□□ 1.43
SERF1B-202ENST00000380751 WWC3Q9ULE0 1092 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms