RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 NUP188Q5SRE5 1749 aa24.41■■□□□ 1.5
CDKN1C-201ENST00000380725 RGPD3A6NKT7 1758 aaPredicted RBP24.39■■□□□ 1.5
CDKN1C-201ENST00000380725 RGPD4Q7Z3J3 1758 aa24.39■■□□□ 1.5
CDKN1C-201ENST00000380725 TATP17735 454 aaPredicted RBP24.39■■□□□ 1.49
CDKN1C-201ENST00000380725 MORC1Q86VD1 984 aa24.39■■□□□ 1.49
CDKN1C-201ENST00000380725 PROM2Q8N271 834 aa24.39■■□□□ 1.49
CDKN1C-201ENST00000380725 MEGF6O75095 1541 aa24.39■■□□□ 1.49
CDKN1C-201ENST00000380725 NSD2O96028 1365 aa24.39■■□□□ 1.49
CDKN1C-201ENST00000380725 NHSQ6T4R5 1651 aa24.38■■□□□ 1.49
CDKN1C-201ENST00000380725 PIAS4Q8N2W9 510 aaPredicted RBP24.38■■□□□ 1.49
CDKN1C-201ENST00000380725 TXNRD1Q16881 649 aa24.35■■□□□ 1.49
CDKN1C-201ENST00000380725 EYA1Q99502 592 aa24.34■■□□□ 1.49
CDKN1C-201ENST00000380725 SHANK3Q9BYB0 1731 aa24.34■■□□□ 1.49
CDKN1C-201ENST00000380725 BTAF1O14981 1849 aa24.33■■□□□ 1.49
CDKN1C-201ENST00000380725 PRIM1P49642 420 aaKnown RBP24.32■■□□□ 1.48
CDKN1C-201ENST00000380725 EIF4A2Q14240 407 aaKnown RBP24.32■■□□□ 1.48
CDKN1C-201ENST00000380725 AMER1Q5JTC6 1135 aaPredicted RBP24.32■■□□□ 1.48
CDKN1C-201ENST00000380725 SYTL4Q96C24 671 aaPredicted RBP24.32■■□□□ 1.48
CDKN1C-201ENST00000380725 SRCAPQ6ZRS2 3230 aa24.31■■□□□ 1.48
CDKN1C-201ENST00000380725 PER1O15534 1290 aaPredicted RBP24.3■■□□□ 1.48
CDKN1C-201ENST00000380725 PCDH11XQ9BZA7 1347 aa24.28■■□□□ 1.48
CDKN1C-201ENST00000380725 PCDH11YQ9BZA8 1340 aa24.28■■□□□ 1.48
CDKN1C-201ENST00000380725 NCAPD2Q15021 1401 aa24.27■■□□□ 1.48
CDKN1C-201ENST00000380725 ANO8Q9HCE9 1232 aaPredicted RBP24.27■■□□□ 1.48
CDKN1C-201ENST00000380725 DOT1LQ8TEK3 1739 aa24.27■■□□□ 1.48
CDKN1C-201ENST00000380725 LRP5O75197 1615 aa24.26■■□□□ 1.47
CDKN1C-201ENST00000380725 SPG7Q9UQ90 795 aa24.26■■□□□ 1.47
CDKN1C-201ENST00000380725 CYP27B1O15528 508 aa24.25■■□□□ 1.47
CDKN1C-201ENST00000380725 STK32BQ9NY57 414 aa24.25■■□□□ 1.47
CDKN1C-201ENST00000380725 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
CDKN1C-201ENST00000380725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.23■■□□□ 1.47
CDKN1C-201ENST00000380725 PKD1L3Q7Z443 1732 aa24.22■■□□□ 1.47
CDKN1C-201ENST00000380725 SLC15A2Q16348 729 aa24.22■■□□□ 1.47
CDKN1C-201ENST00000380725 IGSF1Q8N6C5 1336 aa24.2■■□□□ 1.46
CDKN1C-201ENST00000380725 CNGB1Q14028 1251 aaPredicted RBP24.2■■□□□ 1.46
CDKN1C-201ENST00000380725 SLC27A3Q5K4L6 730 aa24.2■■□□□ 1.46
CDKN1C-201ENST00000380725 LRRC4BQ9NT99 713 aa24.2■■□□□ 1.46
CDKN1C-201ENST00000380725 MTHFSP49914 203 aa24.19■■□□□ 1.46
CDKN1C-201ENST00000380725 MSH5O43196 834 aa24.18■■□□□ 1.46
CDKN1C-201ENST00000380725 NKX1-1Q15270 411 aaPredicted RBP24.18■■□□□ 1.46
CDKN1C-201ENST00000380725 MPRIPQ6WCQ1 1025 aa24.18■■□□□ 1.46
CDKN1C-201ENST00000380725 SPON1Q9HCB6 807 aa24.18■■□□□ 1.46
CDKN1C-201ENST00000380725 IFNL2Q8IZJ0 200 aa24.17■■□□□ 1.46
CDKN1C-201ENST00000380725 PDGFDQ9GZP0 370 aaPredicted RBP24.17■■□□□ 1.46
CDKN1C-201ENST00000380725 ITGB4P16144 1822 aa24.17■■□□□ 1.46
CDKN1C-201ENST00000380725 IL13P35225 146 aa24.16■■□□□ 1.46
CDKN1C-201ENST00000380725 KCNQ4P56696 695 aa24.16■■□□□ 1.46
CDKN1C-201ENST00000380725 NPC1L1Q9UHC9 1359 aa24.16■■□□□ 1.46
CDKN1C-201ENST00000380725 LY75O60449 1722 aa24.15■■□□□ 1.46
CDKN1C-201ENST00000380725 PHKG2P15735 406 aa24.14■■□□□ 1.45
CDKN1C-201ENST00000380725 PLEKHO1Q53GL0 409 aaPredicted RBP24.14■■□□□ 1.45
CDKN1C-201ENST00000380725 SULT6B1Q6IMI4 303 aa24.13■■□□□ 1.45
CDKN1C-201ENST00000380725 AEBP1Q8IUX7 1158 aa24.13■■□□□ 1.45
CDKN1C-201ENST00000380725 CCNL1Q9UK58 526 aaPredicted RBP24.13■■□□□ 1.45
CDKN1C-201ENST00000380725 CASZ1Q86V15 1759 aa24.12■■□□□ 1.45
CDKN1C-201ENST00000380725 ZNF827Q17R98 1081 aa24.12■■□□□ 1.45
CDKN1C-201ENST00000380725 PAPPAQ13219 1627 aa24.12■■□□□ 1.45
CDKN1C-201ENST00000380725 TOGARAM1Q9Y4F4 1720 aa24.11■■□□□ 1.45
CDKN1C-201ENST00000380725 ZBTB7AO95365 584 aa24.11■■□□□ 1.45
CDKN1C-201ENST00000380725 PIGBQ92521 554 aa24.11■■□□□ 1.45
CDKN1C-201ENST00000380725 AKT1S1Q96B36 256 aa24.11■■□□□ 1.45
CDKN1C-201ENST00000380725 PLEKHG2Q9H7P9 1386 aa24.11■■□□□ 1.45
CDKN1C-201ENST00000380725 AMOTQ4VCS5 1084 aa24.1■■□□□ 1.45
CDKN1C-201ENST00000380725 SMARCC1Q92922 1105 aaPredicted RBP24.09■■□□□ 1.45
CDKN1C-201ENST00000380725 PPP1R1BQ9UD71 204 aaPredicted RBP24.09■■□□□ 1.45
CDKN1C-201ENST00000380725 ATF5Q9Y2D1 282 aaPredicted RBP24.09■■□□□ 1.45
CDKN1C-201ENST00000380725 DIAPH1O60610 1272 aaKnown RBP24.08■■□□□ 1.45
CDKN1C-201ENST00000380725 ZNF530Q6P9A1 599 aaPredicted RBP24.08■■□□□ 1.45
CDKN1C-201ENST00000380725 TMOD3Q9NYL9 352 aa24.08■■□□□ 1.45
CDKN1C-201ENST00000380725 HSP90AB1P08238 724 aaKnown RBP24.07■■□□□ 1.44
CDKN1C-201ENST00000380725 TFCP2L1Q9NZI6 479 aa24.07■■□□□ 1.44
CDKN1C-201ENST00000380725 PALLDQ8WX93 1383 aa24.06■■□□□ 1.44
CDKN1C-201ENST00000380725 KDRP35968 1356 aa24.05■■□□□ 1.44
CDKN1C-201ENST00000380725 HMGB2P26583 209 aaKnown RBP24.05■■□□□ 1.44
CDKN1C-201ENST00000380725 MTFR1LQ9H019 292 aa24.05■■□□□ 1.44
CDKN1C-201ENST00000380725 DCAF5Q96JK2 942 aa24.04■■□□□ 1.44
CDKN1C-201ENST00000380725 ERVV-2B6SEH9 535 aa24.03■■□□□ 1.44
CDKN1C-201ENST00000380725 HMOX1P09601 288 aa24.03■■□□□ 1.44
CDKN1C-201ENST00000380725 C1orf141Q5JVX7 400 aa24.03■■□□□ 1.44
CDKN1C-201ENST00000380725 ASAP1Q9ULH1 1129 aa24.02■■□□□ 1.44
CDKN1C-201ENST00000380725 QSER1Q2KHR3 1735 aa24.01■■□□□ 1.43
CDKN1C-201ENST00000380725 PTGER2P43116 358 aa24.01■■□□□ 1.43
CDKN1C-201ENST00000380725 PNPLA7Q6ZV29 1317 aa24.01■■□□□ 1.43
CDKN1C-201ENST00000380725 TAF1LQ8IZX4 1826 aa24■■□□□ 1.43
CDKN1C-201ENST00000380725 SLC16A10Q8TF71 515 aa24■■□□□ 1.43
CDKN1C-201ENST00000380725 TUBGCP6Q96RT7 1819 aa24■■□□□ 1.43
CDKN1C-201ENST00000380725 CABP4P57796 275 aa23.99■■□□□ 1.43
CDKN1C-201ENST00000380725 ATG3Q9NT62 314 aa23.99■■□□□ 1.43
CDKN1C-201ENST00000380725 C5P01031 1676 aa23.99■■□□□ 1.43
CDKN1C-201ENST00000380725 LOC102724428A0A0B4J2F2 783 aa23.98■■□□□ 1.43
CDKN1C-201ENST00000380725 U2SURPO15042 1029 aaKnown RBP23.98■■□□□ 1.43
CDKN1C-201ENST00000380725 SIK1P57059 783 aa23.98■■□□□ 1.43
CDKN1C-201ENST00000380725 CFAP53Q96M91 514 aa23.97■■□□□ 1.43
CDKN1C-201ENST00000380725 PPP2R1AP30153 589 aa23.96■■□□□ 1.43
CDKN1C-201ENST00000380725 AKAP4Q5JQC9 854 aa23.96■■□□□ 1.43
CDKN1C-201ENST00000380725 SGIP1Q9BQI5 828 aa23.96■■□□□ 1.43
CDKN1C-201ENST00000380725 COL3A1P02461 1466 aaPredicted RBP23.95■■□□□ 1.42
CDKN1C-201ENST00000380725 KDM6AO15550 1401 aaPredicted RBP23.95■■□□□ 1.42
CDKN1C-201ENST00000380725 COL23A1Q86Y22 540 aaPredicted RBP23.95■■□□□ 1.42
CDKN1C-201ENST00000380725 ATP6V1AP38606 617 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms