RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 OVOS2Q6IE36 1432 aa20.23■□□□□ 0.83
VPS16-203ENST00000380469 HSP90AB2PQ58FF8 381 aa20.23■□□□□ 0.83
VPS16-203ENST00000380469 NUTM2FA1L443 756 aa20.22■□□□□ 0.83
VPS16-203ENST00000380469 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
VPS16-203ENST00000380469 USP6P35125 1406 aa20.22■□□□□ 0.83
VPS16-203ENST00000380469 CD2BP2O95400 341 aaKnown RBP20.21■□□□□ 0.83
VPS16-203ENST00000380469 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
VPS16-203ENST00000380469 RGS12O14924 1447 aa20.21■□□□□ 0.83
VPS16-203ENST00000380469 MRE11P49959 708 aa20.21■□□□□ 0.83
VPS16-203ENST00000380469 SKOR2Q2VWA4 1001 aaPredicted RBP20.21■□□□□ 0.83
VPS16-203ENST00000380469 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
VPS16-203ENST00000380469 C16orf71Q8IYS4 520 aaPredicted RBP20.2■□□□□ 0.82
VPS16-203ENST00000380469 FOXD4L1Q9NU39 408 aa20.2■□□□□ 0.82
VPS16-203ENST00000380469 UBR1Q8IWV7 1749 aa20.2■□□□□ 0.82
VPS16-203ENST00000380469 ATP10DQ9P241 1426 aa20.2■□□□□ 0.82
VPS16-203ENST00000380469 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
VPS16-203ENST00000380469 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
VPS16-203ENST00000380469 ISY1Q9ULR0 285 aaKnown RBP20.2■□□□□ 0.82
VPS16-203ENST00000380469 USP31Q70CQ4 1352 aa20.19■□□□□ 0.82
VPS16-203ENST00000380469 SLC4A2P04920 1241 aa20.19■□□□□ 0.82
VPS16-203ENST00000380469 RABEP1Q15276 862 aa20.19■□□□□ 0.82
VPS16-203ENST00000380469 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
VPS16-203ENST00000380469 RTL1A6NKG5 1358 aa20.19■□□□□ 0.82
VPS16-203ENST00000380469 MSH6P52701 1360 aa20.19■□□□□ 0.82
VPS16-203ENST00000380469 TOPAZ1Q8N9V7 1692 aa20.19■□□□□ 0.82
VPS16-203ENST00000380469 PLEKHG1Q9ULL1 1385 aa20.18■□□□□ 0.82
VPS16-203ENST00000380469 SOX12O15370 315 aa20.18■□□□□ 0.82
VPS16-203ENST00000380469 ARHGEF10O15013 1369 aa20.18■□□□□ 0.82
VPS16-203ENST00000380469 CRB1P82279 1406 aa20.18■□□□□ 0.82
VPS16-203ENST00000380469 HMMRO75330 724 aa20.17■□□□□ 0.82
VPS16-203ENST00000380469 MEIS3Q99687 375 aa20.17■□□□□ 0.82
VPS16-203ENST00000380469 PEAK1Q9H792 1746 aa20.17■□□□□ 0.82
VPS16-203ENST00000380469 NALCNQ8IZF0 1738 aa20.17■□□□□ 0.82
VPS16-203ENST00000380469 TTC21AQ8NDW8 1320 aa20.16■□□□□ 0.82
VPS16-203ENST00000380469 RGPD1P0DJD0 1748 aa20.16■□□□□ 0.82
VPS16-203ENST00000380469 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
VPS16-203ENST00000380469 USP26Q9BXU7 913 aa20.16■□□□□ 0.82
VPS16-203ENST00000380469 TSPYL4Q9UJ04 414 aa20.16■□□□□ 0.82
VPS16-203ENST00000380469 LTKP29376 864 aa20.15■□□□□ 0.82
VPS16-203ENST00000380469 MIS18AQ9NYP9 233 aa20.15■□□□□ 0.82
VPS16-203ENST00000380469 GOLGA6L22H0YM25 854 aa20.15■□□□□ 0.82
VPS16-203ENST00000380469 APBB1O00213 710 aa20.15■□□□□ 0.82
VPS16-203ENST00000380469 SDSP20132 328 aa20.15■□□□□ 0.82
VPS16-203ENST00000380469 OTUD7AQ8TE49 926 aaPredicted RBP20.15■□□□□ 0.82
VPS16-203ENST00000380469 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.82
VPS16-203ENST00000380469 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.82
VPS16-203ENST00000380469 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.82
VPS16-203ENST00000380469 GRPEL1Q9HAV7 217 aa20.14■□□□□ 0.82
VPS16-203ENST00000380469 MAP3K19Q56UN5 1328 aa20.14■□□□□ 0.81
VPS16-203ENST00000380469 PANK2Q9BZ23 570 aa20.14■□□□□ 0.81
VPS16-203ENST00000380469 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.13■□□□□ 0.81
VPS16-203ENST00000380469 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
VPS16-203ENST00000380469 SSH2Q76I76 1423 aa20.13■□□□□ 0.81
VPS16-203ENST00000380469 FOXO3O43524 673 aa20.13■□□□□ 0.81
VPS16-203ENST00000380469 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
VPS16-203ENST00000380469 SBNO1A3KN83 1393 aa20.12■□□□□ 0.81
VPS16-203ENST00000380469 FLT4P35916 1363 aa20.12■□□□□ 0.81
VPS16-203ENST00000380469 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
VPS16-203ENST00000380469 AMPHP49418 695 aa20.11■□□□□ 0.81
VPS16-203ENST00000380469 REC8O95072 547 aa20.11■□□□□ 0.81
VPS16-203ENST00000380469 SSFA2P28290 1259 aa20.11■□□□□ 0.81
VPS16-203ENST00000380469 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
VPS16-203ENST00000380469 RRAGDQ9NQL2 400 aaPredicted RBP20.11■□□□□ 0.81
VPS16-203ENST00000380469 STK31Q9BXU1 1019 aa20.1■□□□□ 0.81
VPS16-203ENST00000380469 CLEC17AQ6ZS10 378 aa20.1■□□□□ 0.81
VPS16-203ENST00000380469 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
VPS16-203ENST00000380469 G2E3Q7L622 706 aa20.09■□□□□ 0.81
VPS16-203ENST00000380469 PTPRUQ92729 1446 aa20.09■□□□□ 0.81
VPS16-203ENST00000380469 ST18O60284 1047 aa20.09■□□□□ 0.81
VPS16-203ENST00000380469 KDRP35968 1356 aa20.09■□□□□ 0.81
VPS16-203ENST00000380469 FMN2Q9NZ56 1722 aa20.08■□□□□ 0.81
VPS16-203ENST00000380469 F6X3S4 739 aa20.08■□□□□ 0.81
VPS16-203ENST00000380469 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.81
VPS16-203ENST00000380469 GNAI2P04899 355 aa20.08■□□□□ 0.81
VPS16-203ENST00000380469 NUCB2P80303 420 aa20.08■□□□□ 0.81
VPS16-203ENST00000380469 EYA1Q99502 592 aa20.08■□□□□ 0.8
VPS16-203ENST00000380469 ERC2O15083 957 aa20.07■□□□□ 0.8
VPS16-203ENST00000380469 OSBPL3Q9H4L5 887 aa20.07■□□□□ 0.8
VPS16-203ENST00000380469 BAG4O95429 457 aaKnown RBP20.07■□□□□ 0.8
VPS16-203ENST00000380469 KIF13AQ9H1H9 1805 aa20.06■□□□□ 0.8
VPS16-203ENST00000380469 IGSF1Q8N6C5 1336 aa20.06■□□□□ 0.8
VPS16-203ENST00000380469 CWC22Q9HCG8 908 aaKnown RBP20.06■□□□□ 0.8
VPS16-203ENST00000380469 PDE1AP54750 535 aa20.05■□□□□ 0.8
VPS16-203ENST00000380469 CCDC30Q5VVM6 783 aa20.05■□□□□ 0.8
VPS16-203ENST00000380469 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
VPS16-203ENST00000380469 GNAI3P08754 354 aa20.04■□□□□ 0.8
VPS16-203ENST00000380469 RIMS1Q86UR5 1692 aaKnown RBP20.04■□□□□ 0.8
VPS16-203ENST00000380469 GNAT3A8MTJ3 354 aa20.03■□□□□ 0.8
VPS16-203ENST00000380469 DDX49Q9Y6V7 483 aaKnown RBP20.03■□□□□ 0.8
VPS16-203ENST00000380469 GAS2L3Q86XJ1 694 aa20.03■□□□□ 0.8
VPS16-203ENST00000380469 NLRP6P59044 892 aa20.02■□□□□ 0.8
VPS16-203ENST00000380469 FLIIQ13045 1269 aa20.02■□□□□ 0.8
VPS16-203ENST00000380469 FKBP5Q13451 457 aaPredicted RBP20.02■□□□□ 0.8
VPS16-203ENST00000380469 KLHL40Q2TBA0 621 aa20.02■□□□□ 0.8
VPS16-203ENST00000380469 CEP170BQ9Y4F5 1589 aaPredicted RBP20.02■□□□□ 0.79
VPS16-203ENST00000380469 CEBPAP49715 358 aaPredicted RBP20.02■□□□□ 0.79
VPS16-203ENST00000380469 LRRCC1Q9C099 1032 aa20.02■□□□□ 0.79
VPS16-203ENST00000380469 EXOC6BQ9Y2D4 811 aa20.01■□□□□ 0.79
VPS16-203ENST00000380469 SOS1Q07889 1333 aaPredicted RBP20■□□□□ 0.79
VPS16-203ENST00000380469 DIP2AQ14689 1571 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms