RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 ANKRD36BQ8N2N9 1353 aa32.27■■■□□ 2.76
CDKN2B-202ENST00000380142 ST20-MTHFSA0A0A6YYL1 179 aa32.26■■■□□ 2.75
CDKN2B-202ENST00000380142 PRIM1P49642 420 aaKnown RBP32.26■■■□□ 2.75
CDKN2B-202ENST00000380142 COG3Q96JB2 828 aa32.24■■■□□ 2.75
CDKN2B-202ENST00000380142 SLC16A10Q8TF71 515 aa32.23■■■□□ 2.75
CDKN2B-202ENST00000380142 SYTL4Q96C24 671 aaPredicted RBP32.22■■■□□ 2.75
CDKN2B-202ENST00000380142 AMPHP49418 695 aa32.2■■■□□ 2.75
CDKN2B-202ENST00000380142 ZCRB1Q8TBF4 217 aaKnown RBP32.2■■■□□ 2.75
CDKN2B-202ENST00000380142 NBPF6Q5VWK0 638 aa32.18■■■□□ 2.74
CDKN2B-202ENST00000380142 NBPF4Q96M43 638 aa32.18■■■□□ 2.74
CDKN2B-202ENST00000380142 RRS1Q15050 365 aaKnown RBP32.17■■■□□ 2.74
CDKN2B-202ENST00000380142 TFCP2L1Q9NZI6 479 aa32.17■■■□□ 2.74
CDKN2B-202ENST00000380142 RTL1A6NKG5 1358 aa32.16■■■□□ 2.74
CDKN2B-202ENST00000380142 KLHL34Q8N239 644 aa32.15■■■□□ 2.74
CDKN2B-202ENST00000380142 USHBP1Q8N6Y0 703 aa32.15■■■□□ 2.74
CDKN2B-202ENST00000380142 NLGN2Q8NFZ4 835 aa32.15■■■□□ 2.74
CDKN2B-202ENST00000380142 TAF1LQ8IZX4 1826 aa32.14■■■□□ 2.74
CDKN2B-202ENST00000380142 KIF20BQ96Q89 1820 aa32.14■■■□□ 2.74
CDKN2B-202ENST00000380142 FYB1O15117 783 aa32.14■■■□□ 2.74
CDKN2B-202ENST00000380142 GPR162Q16538 588 aa32.14■■■□□ 2.74
CDKN2B-202ENST00000380142 GGNBP2Q9H3C7 697 aa32.13■■■□□ 2.73
CDKN2B-202ENST00000380142 C5P01031 1676 aa32.12■■■□□ 2.73
CDKN2B-202ENST00000380142 POLD1P28340 1107 aa32.12■■■□□ 2.73
CDKN2B-202ENST00000380142 CCNL1Q9UK58 526 aaPredicted RBP32.11■■■□□ 2.73
CDKN2B-202ENST00000380142 TOGARAM1Q9Y4F4 1720 aa32.1■■■□□ 2.73
CDKN2B-202ENST00000380142 ITGB4P16144 1822 aa32.1■■■□□ 2.73
CDKN2B-202ENST00000380142 COL23A1Q86Y22 540 aaPredicted RBP32.09■■■□□ 2.73
CDKN2B-202ENST00000380142 GOLGB1Q14789 3259 aaKnown RBP32.08■■■□□ 2.73
CDKN2B-202ENST00000380142 C1QTNF8P60827 252 aa32.07■■■□□ 2.72
CDKN2B-202ENST00000380142 HSP90AB2PQ58FF8 381 aa32.06■■■□□ 2.72
CDKN2B-202ENST00000380142 USP47Q96K76 1375 aa32.06■■■□□ 2.72
CDKN2B-202ENST00000380142 PELP1Q8IZL8 1130 aaKnown RBP32.04■■■□□ 2.72
CDKN2B-202ENST00000380142 CGNL1Q0VF96 1302 aa32.03■■■□□ 2.72
CDKN2B-202ENST00000380142 YBX3P16989 372 aaKnown RBP eCLIP32.03■■■□□ 2.72
CDKN2B-202ENST00000380142 INSRP06213 1382 aa32.03■■■□□ 2.72
CDKN2B-202ENST00000380142 PKD1L3Q7Z443 1732 aa32.02■■■□□ 2.72
CDKN2B-202ENST00000380142 SLC24A1O60721 1099 aa32.01■■■□□ 2.71
CDKN2B-202ENST00000380142 RAPGEF4Q8WZA2 1011 aa32.01■■■□□ 2.71
CDKN2B-202ENST00000380142 SENP3-EIF4A1A0A087X0R7 540 aa32■■■□□ 2.71
CDKN2B-202ENST00000380142 MSL1Q68DK7 614 aa32■■■□□ 2.71
CDKN2B-202ENST00000380142 SMG6Q86US8 1419 aaKnown RBP32■■■□□ 2.71
CDKN2B-202ENST00000380142 TATP17735 454 aaPredicted RBP31.99■■■□□ 2.71
CDKN2B-202ENST00000380142 CYP27B1O15528 508 aa31.98■■■□□ 2.71
CDKN2B-202ENST00000380142 TMF1P82094 1093 aa31.98■■■□□ 2.71
CDKN2B-202ENST00000380142 C4BP0C0L5 1744 aa31.97■■■□□ 2.71
CDKN2B-202ENST00000380142 UBR3Q6ZT12 1888 aa31.97■■■□□ 2.71
CDKN2B-202ENST00000380142 FLT4P35916 1363 aa31.97■■■□□ 2.71
CDKN2B-202ENST00000380142 MSH5O43196 834 aa31.97■■■□□ 2.71
CDKN2B-202ENST00000380142 MAP2P11137 1827 aaKnown RBP31.97■■■□□ 2.71
CDKN2B-202ENST00000380142 CARD14Q9BXL6 1004 aa31.96■■■□□ 2.71
CDKN2B-202ENST00000380142 ANKRD26Q9UPS8 1709 aa31.96■■■□□ 2.71
CDKN2B-202ENST00000380142 PCDH11XQ9BZA7 1347 aa31.96■■■□□ 2.71
CDKN2B-202ENST00000380142 PCDH11YQ9BZA8 1340 aa31.96■■■□□ 2.71
CDKN2B-202ENST00000380142 PALLDQ8WX93 1383 aa31.95■■■□□ 2.71
CDKN2B-202ENST00000380142 AMIGO3Q86WK7 504 aa31.95■■■□□ 2.71
CDKN2B-202ENST00000380142 NCAPD2Q15021 1401 aa31.94■■■□□ 2.7
CDKN2B-202ENST00000380142 KIF24Q5T7B8 1368 aa31.93■■■□□ 2.7
CDKN2B-202ENST00000380142 MPRIPQ6WCQ1 1025 aa31.92■■■□□ 2.7
CDKN2B-202ENST00000380142 EMILIN1Q9Y6C2 1016 aa31.92■■■□□ 2.7
CDKN2B-202ENST00000380142 GIGYF1O75420 1035 aaPredicted RBP31.89■■■□□ 2.7
CDKN2B-202ENST00000380142 SMIM5Q71RC9 77 aa31.89■■■□□ 2.7
CDKN2B-202ENST00000380142 NSD3Q9BZ95 1437 aa31.87■■■□□ 2.69
CDKN2B-202ENST00000380142 GRIN3BO60391 1043 aa31.86■■■□□ 2.69
CDKN2B-202ENST00000380142 PIGBQ92521 554 aa31.85■■■□□ 2.69
CDKN2B-202ENST00000380142 CD2APQ9Y5K6 639 aa31.84■■■□□ 2.69
CDKN2B-202ENST00000380142 NKX1-1Q15270 411 aaPredicted RBP31.83■■■□□ 2.69
CDKN2B-202ENST00000380142 FLAD1Q8NFF5 587 aa31.83■■■□□ 2.69
CDKN2B-202ENST00000380142 SMARCC1Q92922 1105 aaPredicted RBP31.8■■■□□ 2.68
CDKN2B-202ENST00000380142 ATP10DQ9P241 1426 aa31.8■■■□□ 2.68
CDKN2B-202ENST00000380142 CDCA8Q53HL2 280 aa31.79■■■□□ 2.68
CDKN2B-202ENST00000380142 LINC00116Q8NCU8 138 aa31.78■■■□□ 2.68
CDKN2B-202ENST00000380142 EYA1Q99502 592 aa31.78■■■□□ 2.68
CDKN2B-202ENST00000380142 AK7Q96M32 723 aa31.77■■■□□ 2.68
CDKN2B-202ENST00000380142 WASHC2AQ641Q2 1341 aa31.76■■■□□ 2.68
CDKN2B-202ENST00000380142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.76■■■□□ 2.67
CDKN2B-202ENST00000380142 PHF14O94880 888 aa31.76■■■□□ 2.67
CDKN2B-202ENST00000380142 ADCY9O60503 1353 aa31.76■■■□□ 2.67
CDKN2B-202ENST00000380142 PPM1GO15355 546 aaPredicted RBP31.75■■■□□ 2.67
CDKN2B-202ENST00000380142 LOC102724428A0A0B4J2F2 783 aa31.74■■■□□ 2.67
CDKN2B-202ENST00000380142 SIK1P57059 783 aa31.74■■■□□ 2.67
CDKN2B-202ENST00000380142 ITPK1Q13572 414 aa31.74■■■□□ 2.67
CDKN2B-202ENST00000380142 ASAP1Q9ULH1 1129 aa31.73■■■□□ 2.67
CDKN2B-202ENST00000380142 POLKQ9UBT6 870 aa31.72■■■□□ 2.67
CDKN2B-202ENST00000380142 SPG7Q9UQ90 795 aa31.72■■■□□ 2.67
CDKN2B-202ENST00000380142 KIAA1551Q9HCM1 1747 aa31.72■■■□□ 2.67
CDKN2B-202ENST00000380142 HMGB2P26583 209 aaKnown RBP31.71■■■□□ 2.67
CDKN2B-202ENST00000380142 WWC3Q9ULE0 1092 aa31.71■■■□□ 2.67
CDKN2B-202ENST00000380142 IGSF1Q8N6C5 1336 aa31.71■■■□□ 2.67
CDKN2B-202ENST00000380142 CEP350Q5VT06 3117 aa31.71■■■□□ 2.67
CDKN2B-202ENST00000380142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.7■■■□□ 2.67
CDKN2B-202ENST00000380142 KIF13BQ9NQT8 1826 aa31.7■■■□□ 2.66
CDKN2B-202ENST00000380142 PHKG2P15735 406 aa31.69■■■□□ 2.66
CDKN2B-202ENST00000380142 SSFA2P28290 1259 aa31.69■■■□□ 2.66
CDKN2B-202ENST00000380142 ATG3Q9NT62 314 aa31.67■■■□□ 2.66
CDKN2B-202ENST00000380142 TMOD3Q9NYL9 352 aa31.67■■■□□ 2.66
CDKN2B-202ENST00000380142 IFNL2Q8IZJ0 200 aa31.65■■■□□ 2.66
CDKN2B-202ENST00000380142 COL5A3P25940 1745 aaPredicted RBP31.64■■■□□ 2.66
CDKN2B-202ENST00000380142 N4BP2Q86UW6 1770 aaPredicted RBP31.64■■■□□ 2.66
CDKN2B-202ENST00000380142 EIF4A2Q14240 407 aaKnown RBP31.64■■■□□ 2.66
CDKN2B-202ENST00000380142 KDRP35968 1356 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms