RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 AP5Z1O43299 807 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 PPP2R1AP30153 589 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 MVPQ14764 893 aaKnown RBP10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 ERCC6LQ2NKX8 1250 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 PTPRCP08575 1304 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 MNAT1P51948 309 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 GSCP56915 257 aaPredicted RBP10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 LEKR1Q6ZMV7 388 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 PPM1EQ8WY54 764 aa10.12□□□□□ -0.79
NHLRC3-201ENST00000379599 H0YHG0 523 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 CLSTN1O94985 981 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 SLU7O95391 586 aaKnown RBP10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 CLCN6P51797 869 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 SARNPP82979 210 aaKnown RBP10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 TMCO3Q6UWJ1 677 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 ITPRIPQ8IWB1 547 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 ST18O60284 1047 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 PTPN14Q15678 1187 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 CCDC183Q5T5S1 534 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 DNAAF4Q8WXU2 420 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 KDM5CP41229 1560 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 EIF3CLB5ME19 914 aaKnown RBP10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 OAS2P29728 719 aaKnown RBP10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 FBLN2P98095 1184 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 EIF3CQ99613 913 aaKnown RBP10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 CFAP43Q8NDM7 1665 aa10.11□□□□□ -0.79
NHLRC3-201ENST00000379599 PLEKHG2Q9H7P9 1386 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 FHOD3Q2V2M9 1422 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 KDM6BO15054 1643 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 RNF20Q5VTR2 975 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 GIMAP6Q6P9H5 292 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 MMS22LQ6ZRQ5 1243 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 NRBP1Q9UHY1 535 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 FGD5Q6ZNL6 1462 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 TOP2BQ02880 1626 aa10.1□□□□□ -0.79
NHLRC3-201ENST00000379599 ARID4AP29374 1257 aaPredicted RBP10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 USP48Q86UV5 1035 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 DZIP1LQ8IYY4 767 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 ARGLU1Q9NWB6 273 aaPredicted RBP10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 CCDC196A0A1B0GTZ2 297 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 SCP2P22307 547 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 ARHGAP29Q52LW3 1261 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 BMP2KLQ5H9B9 411 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 PDRG1Q9NUG6 133 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 TRMT1Q9NXH9 659 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 KNSTRNQ9Y448 316 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 TTC19Q6DKK2 380 aaPredicted RBP10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 NOL8Q76FK4 1167 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 CCDC34Q96HJ3 373 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
NHLRC3-201ENST00000379599 RAD50Q92878 1312 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 RRP7AQ9Y3A4 280 aaKnown RBP10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 ACTN2P35609 894 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 HDAC1Q13547 482 aaPredicted RBP10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 ZKSCAN2Q63HK3 967 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 SUGP1Q8IWZ8 645 aaKnown RBP10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 SLC24A3Q9HC58 644 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 CARMIL1Q5VZK9 1371 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 IVLP07476 585 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 MX1P20591 662 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 GORABQ5T7V8 394 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 ZSCAN25Q6NSZ9 544 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 TRIM5Q9C035 493 aa10.08□□□□□ -0.8
NHLRC3-201ENST00000379599 IGF1RP08069 1367 aa10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 NEBLO76041 1014 aa10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 SEC31AO94979 1220 aaKnown RBP10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 H2AFXP16104 143 aaPredicted RBP10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 NBPF9Q3BBW0 867 aa10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 TPM1P09493 284 aa10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 SKIDA1Q1XH10 827 aa10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 GIMAP7Q8NHV1 300 aa10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 CEP89Q96ST8 783 aa10.07□□□□□ -0.8
NHLRC3-201ENST00000379599 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 CDC45O75419 566 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 NUCB1Q02818 461 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 SMC1AQ14683 1233 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 ZRSR1Q15695 479 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 PRPF38AQ8NAV1 312 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 MAP9Q49MG5 647 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 NBPF11Q86T75 865 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 ZNF513Q8N8E2 541 aaPredicted RBP10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 TERF2IPQ9NYB0 399 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 EPRSP07814 1512 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 USP27XA6NNY8 438 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 SMC2O95347 1197 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 FOXR1Q6PIV2 292 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 ADAM21Q9UKJ8 722 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 MRVI1Q9Y6F6 885 aa10.06□□□□□ -0.8
NHLRC3-201ENST00000379599 KIF2AO00139 706 aaPredicted RBP10.05□□□□□ -0.8
NHLRC3-201ENST00000379599 NAIF1Q69YI7 327 aaPredicted RBP10.05□□□□□ -0.8
NHLRC3-201ENST00000379599 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
NHLRC3-201ENST00000379599 CAMSAP2Q08AD1 1489 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms