RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 GJD4Q96KN9 370 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-202ENST00000379446 NIP7Q9Y221 180 aaKnown RBP eCLIP8.03□□□□□ -1.12
NEDD9-202ENST00000379446 DISP1Q96F81 1524 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 RIMBP2O15034 1052 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 WASHC4Q2M389 1173 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 LRRFIP1Q32MZ4 808 aaKnown RBP8.03□□□□□ -1.12
NEDD9-202ENST00000379446 PODXL2Q9NZ53 605 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 LRRIQ1Q96JM4 1722 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 MPHOSPH10O00566 681 aaKnown RBP8.03□□□□□ -1.12
NEDD9-202ENST00000379446 APAF1O14727 1248 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 RFX1P22670 979 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 C20orf194Q5TEA3 1177 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 CCDC24Q8N4L8 307 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 CNBD1Q8NA66 436 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 RSPH6AQ9H0K4 717 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 RAPGEF6Q8TEU7 1601 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 TMEM132AQ24JP5 1023 aa8.02□□□□□ -1.12
NEDD9-202ENST00000379446 PPP1R42Q7Z4L9 355 aa8.02□□□□□ -1.12
NEDD9-202ENST00000379446 CHMP4CQ96CF2 233 aa8.02□□□□□ -1.12
NEDD9-202ENST00000379446 FMNL2Q96PY5 1086 aa8.02□□□□□ -1.12
NEDD9-202ENST00000379446 ARHGEF10O15013 1369 aa8.02□□□□□ -1.12
NEDD9-202ENST00000379446 KIAA0556O60303 1618 aa8.02□□□□□ -1.13
NEDD9-202ENST00000379446 ZFYVE16Q7Z3T8 1539 aa8.02□□□□□ -1.13
NEDD9-202ENST00000379446 DNMT1P26358 1616 aaKnown RBP8.02□□□□□ -1.13
NEDD9-202ENST00000379446 H7C1D1 291 aa8.02□□□□□ -1.13
NEDD9-202ENST00000379446 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-202ENST00000379446 CA8P35219 290 aa8.02□□□□□ -1.13
NEDD9-202ENST00000379446 NUP160Q12769 1436 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 AKAP17AQ02040 695 aaKnown RBP8.01□□□□□ -1.13
NEDD9-202ENST00000379446 IFIT2P09913 472 aaKnown RBP8.01□□□□□ -1.13
NEDD9-202ENST00000379446 HSP90AB3PQ58FF7 597 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 RAI14Q9P0K7 980 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 NOS1P29475 1434 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 TARBP1Q13395 1621 aaKnown RBP8.01□□□□□ -1.13
NEDD9-202ENST00000379446 KCNQ4P56696 695 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 LARP1Q6PKG0 1096 aaKnown RBP8.01□□□□□ -1.13
NEDD9-202ENST00000379446 NIM1KQ8IY84 436 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 STK11IPQ8N1F8 1099 aa8.01□□□□□ -1.13
NEDD9-202ENST00000379446 KIF22Q14807 665 aa8□□□□□ -1.13
NEDD9-202ENST00000379446 PPP2R1AP30153 589 aa8□□□□□ -1.13
NEDD9-202ENST00000379446 BACH2Q9BYV9 841 aa8□□□□□ -1.13
NEDD9-202ENST00000379446 R3HCC1Q9Y3T6 440 aaKnown RBP8□□□□□ -1.13
NEDD9-202ENST00000379446 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
NEDD9-202ENST00000379446 FAM83GA6ND36 823 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 GNAT3A8MTJ3 354 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 GNAI1P63096 354 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 ARHGEF6Q15052 776 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 CAVIN4Q5BKX8 364 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 BRINP3Q76B58 766 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 RNF181Q9P0P0 153 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 PBRM1Q86U86 1689 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 SPATA31A6Q5VVP1 1343 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 RALGAPBQ86X10 1494 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 SYNE3Q6ZMZ3 975 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 SLC39A6Q13433 755 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 NLGN1Q8N2Q7 840 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 MIS18AQ9NYP9 233 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 NEO1Q92859 1461 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 E9PSI1 815 aa7.99□□□□□ -1.13
NEDD9-202ENST00000379446 TMEM2Q9UHN6 1383 aa7.98□□□□□ -1.13
NEDD9-202ENST00000379446 TRIM44Q96DX7 344 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-202ENST00000379446 C2CD5Q86YS7 1000 aa7.98□□□□□ -1.13
NEDD9-202ENST00000379446 EYA3Q99504 573 aa7.98□□□□□ -1.13
NEDD9-202ENST00000379446 LRP2BPQ9P2M1 347 aa7.98□□□□□ -1.13
NEDD9-202ENST00000379446 COG6Q9Y2V7 657 aa7.98□□□□□ -1.13
NEDD9-202ENST00000379446 WWC2Q6AWC2 1192 aa7.98□□□□□ -1.13
NEDD9-202ENST00000379446 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
NEDD9-202ENST00000379446 CENPQQ7L2Z9 268 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-202ENST00000379446 DZIP1Q86YF9 867 aaKnown RBP7.97□□□□□ -1.13
NEDD9-202ENST00000379446 SULF1Q8IWU6 871 aa7.97□□□□□ -1.13
NEDD9-202ENST00000379446 CDC5LQ99459 802 aaKnown RBP7.97□□□□□ -1.13
NEDD9-202ENST00000379446 SIL1Q9H173 461 aa7.97□□□□□ -1.13
NEDD9-202ENST00000379446 PPIP5K2O43314 1243 aa7.97□□□□□ -1.13
NEDD9-202ENST00000379446 BCAR3O75815 825 aa7.97□□□□□ -1.13
NEDD9-202ENST00000379446 SOCS7O14512 581 aa7.97□□□□□ -1.13
NEDD9-202ENST00000379446 DALRD3Q5D0E6 543 aaKnown RBP7.97□□□□□ -1.13
NEDD9-202ENST00000379446 UBTFL1P0CB47 393 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-202ENST00000379446 TRDNQ13061 729 aa7.97□□□□□ -1.13
NEDD9-202ENST00000379446 RIMBP3CA6NJZ7 1639 aa7.96□□□□□ -1.13
NEDD9-202ENST00000379446 RIMBP3BA6NNM3 1639 aa7.96□□□□□ -1.13
NEDD9-202ENST00000379446 RIMBP3Q9UFD9 1639 aa7.96□□□□□ -1.13
NEDD9-202ENST00000379446 FBLN1P23142 703 aa7.96□□□□□ -1.13
NEDD9-202ENST00000379446 METTL24Q5JXM2 366 aa7.96□□□□□ -1.13
NEDD9-202ENST00000379446 CEP126Q9P2H0 1117 aa7.96□□□□□ -1.13
NEDD9-202ENST00000379446 FAM161AQ3B820 660 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 ERFEQ4G0M1 354 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 DCPSQ96C86 337 aaKnown RBP7.96□□□□□ -1.14
NEDD9-202ENST00000379446 NYXQ9GZU5 481 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 LRRFIP2Q9Y608 721 aaKnown RBP7.96□□□□□ -1.14
NEDD9-202ENST00000379446 RNF123Q5XPI4 1314 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 TTC21BQ7Z4L5 1316 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 MCCP23508 829 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 PIP4K2AP48426 406 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-202ENST00000379446 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 PAF1Q8N7H5 531 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 PANK1Q8TE04 598 aa7.96□□□□□ -1.14
NEDD9-202ENST00000379446 ERICH2A1L162 156 aa7.95□□□□□ -1.14
NEDD9-202ENST00000379446 PER1O15534 1290 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms