RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 MORC1Q86VD1 984 aa20.16■□□□□ 0.82
SMS-201ENST00000379404 DDX54Q8TDD1 881 aaKnown RBP20.16■□□□□ 0.82
SMS-201ENST00000379404 EYA1Q99502 592 aa20.16■□□□□ 0.82
SMS-201ENST00000379404 RGPD3A6NKT7 1758 aaPredicted RBP20.16■□□□□ 0.82
SMS-201ENST00000379404 RGPD4Q7Z3J3 1758 aa20.16■□□□□ 0.82
SMS-201ENST00000379404 PSDA5PKW4 1024 aaPredicted RBP20.15■□□□□ 0.82
SMS-201ENST00000379404 ACSBG1Q96GR2 724 aa20.15■□□□□ 0.82
SMS-201ENST00000379404 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
SMS-201ENST00000379404 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
SMS-201ENST00000379404 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
SMS-201ENST00000379404 RAPGEF4Q8WZA2 1011 aa20.14■□□□□ 0.81
SMS-201ENST00000379404 TATP17735 454 aaPredicted RBP20.13■□□□□ 0.81
SMS-201ENST00000379404 R3HDM1Q15032 1099 aaKnown RBP20.12■□□□□ 0.81
SMS-201ENST00000379404 CYP27B1O15528 508 aa20.09■□□□□ 0.81
SMS-201ENST00000379404 TXNRD1Q16881 649 aa20.09■□□□□ 0.81
SMS-201ENST00000379404 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
SMS-201ENST00000379404 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
SMS-201ENST00000379404 BTAF1O14981 1849 aa20.07■□□□□ 0.8
SMS-201ENST00000379404 PRIM1P49642 420 aaKnown RBP20.07■□□□□ 0.8
SMS-201ENST00000379404 NBPF14Q5TI25 921 aa20.07■□□□□ 0.8
SMS-201ENST00000379404 KAT6BQ8WYB5 2073 aa20.07■□□□□ 0.8
SMS-201ENST00000379404 PKD1L3Q7Z443 1732 aa20.06■□□□□ 0.8
SMS-201ENST00000379404 ANO8Q9HCE9 1232 aaPredicted RBP20.06■□□□□ 0.8
SMS-201ENST00000379404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■□□□□ 9.8
SMS-201ENST00000379404 PCDH11XQ9BZA7 1347 aa20.05■□□□□ 0.8
SMS-201ENST00000379404 PCDH11YQ9BZA8 1340 aa20.05■□□□□ 0.8
SMS-201ENST00000379404 IL13P35225 146 aa20.05■□□□□ 0.8
SMS-201ENST00000379404 CC2D1BQ5T0F9 858 aaKnown RBP20.05■□□□□ 0.8
SMS-201ENST00000379404 MTHFSP49914 203 aa20.04■□□□□ 0.8
SMS-201ENST00000379404 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
SMS-201ENST00000379404 DOT1LQ8TEK3 1739 aa20.03■□□□□ 0.8
SMS-201ENST00000379404 PLEKHG2Q9H7P9 1386 aa20.03■□□□□ 0.8
SMS-201ENST00000379404 LRRC4BQ9NT99 713 aa20.02■□□□□ 0.8
SMS-201ENST00000379404 SPG7Q9UQ90 795 aa20.02■□□□□ 0.8
SMS-201ENST00000379404 LRP5O75197 1615 aa20.01■□□□□ 0.79
SMS-201ENST00000379404 AEBP1Q8IUX7 1158 aa20■□□□□ 0.79
SMS-201ENST00000379404 SYTL4Q96C24 671 aaPredicted RBP20■□□□□ 0.79
SMS-201ENST00000379404 PAPPAQ13219 1627 aa19.98■□□□□ 0.79
SMS-201ENST00000379404 KDRP35968 1356 aa19.98■□□□□ 0.79
SMS-201ENST00000379404 PHKG2P15735 406 aa19.98■□□□□ 0.79
SMS-201ENST00000379404 SLC15A2Q16348 729 aa19.98■□□□□ 0.79
SMS-201ENST00000379404 TOGARAM1Q9Y4F4 1720 aa19.97■□□□□ 0.79
SMS-201ENST00000379404 IFNL2Q8IZJ0 200 aa19.97■□□□□ 0.79
SMS-201ENST00000379404 PDGFDQ9GZP0 370 aaPredicted RBP19.97■□□□□ 0.79
SMS-201ENST00000379404 SLC27A3Q5K4L6 730 aa19.96■□□□□ 0.79
SMS-201ENST00000379404 SULT6B1Q6IMI4 303 aa19.96■□□□□ 0.79
SMS-201ENST00000379404 LY75O60449 1722 aa19.96■□□□□ 0.79
SMS-201ENST00000379404 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
SMS-201ENST00000379404 CASZ1Q86V15 1759 aa19.94■□□□□ 0.78
SMS-201ENST00000379404 KCNQ4P56696 695 aa19.94■□□□□ 0.78
SMS-201ENST00000379404 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
SMS-201ENST00000379404 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
SMS-201ENST00000379404 PIGBQ92521 554 aa19.94■□□□□ 0.78
SMS-201ENST00000379404 AKT1S1Q96B36 256 aa19.94■□□□□ 0.78
SMS-201ENST00000379404 ITGB4P16144 1822 aa19.94■□□□□ 0.78
SMS-201ENST00000379404 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
SMS-201ENST00000379404 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
SMS-201ENST00000379404 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
SMS-201ENST00000379404 DIAPH1O60610 1272 aaKnown RBP19.92■□□□□ 0.78
SMS-201ENST00000379404 AMOTQ4VCS5 1084 aa19.92■□□□□ 0.78
SMS-201ENST00000379404 CCNL1Q9UK58 526 aaPredicted RBP19.89■□□□□ 0.77
SMS-201ENST00000379404 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
SMS-201ENST00000379404 ZNF530Q6P9A1 599 aaPredicted RBP19.88■□□□□ 0.77
SMS-201ENST00000379404 DCAF5Q96JK2 942 aa19.88■□□□□ 0.77
SMS-201ENST00000379404 SPON1Q9HCB6 807 aa19.88■□□□□ 0.77
SMS-201ENST00000379404 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
SMS-201ENST00000379404 PALLDQ8WX93 1383 aa19.87■□□□□ 0.77
SMS-201ENST00000379404 ERVV-2B6SEH9 535 aa19.87■□□□□ 0.77
SMS-201ENST00000379404 HMOX1P09601 288 aa19.87■□□□□ 0.77
SMS-201ENST00000379404 SMARCC1Q92922 1105 aaPredicted RBP19.87■□□□□ 0.77
SMS-201ENST00000379404 HSP90AB1P08238 724 aaKnown RBP19.86■□□□□ 0.77
SMS-201ENST00000379404 TMOD3Q9NYL9 352 aa19.86■□□□□ 0.77
SMS-201ENST00000379404 ASAP1Q9ULH1 1129 aa19.86■□□□□ 0.77
SMS-201ENST00000379404 PTGER2P43116 358 aa19.85■□□□□ 0.77
SMS-201ENST00000379404 ATG3Q9NT62 314 aa19.85■□□□□ 0.77
SMS-201ENST00000379404 PNPLA7Q6ZV29 1317 aa19.84■□□□□ 0.77
SMS-201ENST00000379404 ZBTB7AO95365 584 aa19.84■□□□□ 0.77
SMS-201ENST00000379404 SGIP1Q9BQI5 828 aa19.84■□□□□ 0.77
SMS-201ENST00000379404 QSER1Q2KHR3 1735 aa19.83■□□□□ 0.77
SMS-201ENST00000379404 MTHFSDQ2M296 383 aaKnown RBP19.82■□□□□ 0.76
SMS-201ENST00000379404 TAF1LQ8IZX4 1826 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 TUBGCP6Q96RT7 1819 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 LOC102724428A0A0B4J2F2 783 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 SIK1P57059 783 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 AKAP4Q5JQC9 854 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 C1orf141Q5JVX7 400 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 MTFR1LQ9H019 292 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 TFCP2L1Q9NZI6 479 aa19.81■□□□□ 0.76
SMS-201ENST00000379404 ATF5Q9Y2D1 282 aaPredicted RBP19.81■□□□□ 0.76
SMS-201ENST00000379404 SLC4A9Q96Q91 983 aa19.8■□□□□ 0.76
SMS-201ENST00000379404 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
SMS-201ENST00000379404 C5P01031 1676 aa19.79■□□□□ 0.76
SMS-201ENST00000379404 U2SURPO15042 1029 aaKnown RBP19.79■□□□□ 0.76
SMS-201ENST00000379404 NFATC2IPQ8NCF5 419 aa19.79■□□□□ 0.76
SMS-201ENST00000379404 SLC16A10Q8TF71 515 aa19.79■□□□□ 0.76
SMS-201ENST00000379404 CFAP53Q96M91 514 aa19.79■□□□□ 0.76
SMS-201ENST00000379404 CABP4P57796 275 aa19.78■□□□□ 0.76
SMS-201ENST00000379404 ITPK1Q13572 414 aa19.78■□□□□ 0.76
SMS-201ENST00000379404 SCN11AQ9UI33 1791 aa19.78■□□□□ 0.76
SMS-201ENST00000379404 HMGB2P26583 209 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms