RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 ZBTB7AO95365 584 aa19.24■□□□□ 0.67
PCNA-202ENST00000379160 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
PCNA-202ENST00000379160 ANKRD36BQ8N2N9 1353 aa19.23■□□□□ 0.67
PCNA-202ENST00000379160 USP47Q96K76 1375 aa19.23■□□□□ 0.67
PCNA-202ENST00000379160 AMPHP49418 695 aa19.23■□□□□ 0.67
PCNA-202ENST00000379160 TMF1P82094 1093 aa19.23■□□□□ 0.67
PCNA-202ENST00000379160 SLC15A2Q16348 729 aa19.23■□□□□ 0.67
PCNA-202ENST00000379160 FAM208AQ9UK61 1670 aaKnown RBP19.23■□□□□ 0.67
PCNA-202ENST00000379160 HOXC9P31274 260 aa19.22■□□□□ 0.67
PCNA-202ENST00000379160 DDX54Q8TDD1 881 aaKnown RBP19.22■□□□□ 0.67
PCNA-202ENST00000379160 BTAF1O14981 1849 aa19.22■□□□□ 0.67
PCNA-202ENST00000379160 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
PCNA-202ENST00000379160 RGPD2P0DJD1 1756 aa19.2■□□□□ 0.66
PCNA-202ENST00000379160 RRS1Q15050 365 aaKnown RBP19.19■□□□□ 0.66
PCNA-202ENST00000379160 FYB1O15117 783 aa19.19■□□□□ 0.66
PCNA-202ENST00000379160 SPDYE2BA6NHP3 402 aa19.18■□□□□ 0.66
PCNA-202ENST00000379160 SPDYE6P0CI01 402 aa19.18■□□□□ 0.66
PCNA-202ENST00000379160 PTGER2P43116 358 aa19.18■□□□□ 0.66
PCNA-202ENST00000379160 SPDYE2Q495Y8 402 aa19.18■□□□□ 0.66
PCNA-202ENST00000379160 MYOM1P52179 1685 aa19.17■□□□□ 0.66
PCNA-202ENST00000379160 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
PCNA-202ENST00000379160 PAPPAQ13219 1627 aa19.16■□□□□ 0.66
PCNA-202ENST00000379160 LRRC4BQ9NT99 713 aa19.15■□□□□ 0.66
PCNA-202ENST00000379160 RTL1A6NKG5 1358 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 YY1P25490 414 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 ZNF827Q17R98 1081 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 NBPF6Q5VWK0 638 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 USHBP1Q8N6Y0 703 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 ZCRB1Q8TBF4 217 aaKnown RBP19.14■□□□□ 0.65
PCNA-202ENST00000379160 NBPF4Q96M43 638 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 MTFR1LQ9H019 292 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 KIF20BQ96Q89 1820 aa19.14■□□□□ 0.65
PCNA-202ENST00000379160 MEGF6O75095 1541 aa19.13■□□□□ 0.65
PCNA-202ENST00000379160 PRIM1P49642 420 aaKnown RBP19.13■□□□□ 0.65
PCNA-202ENST00000379160 DOT1LQ8TEK3 1739 aa19.13■□□□□ 0.65
PCNA-202ENST00000379160 SHANK3Q9BYB0 1731 aa19.13■□□□□ 0.65
PCNA-202ENST00000379160 SMG6Q86US8 1419 aaKnown RBP19.11■□□□□ 0.65
PCNA-202ENST00000379160 KCNQ4P56696 695 aa19.1■□□□□ 0.65
PCNA-202ENST00000379160 HSP90AB2PQ58FF8 381 aa19.1■□□□□ 0.65
PCNA-202ENST00000379160 FHDC1Q9C0D6 1143 aaPredicted RBP19.1■□□□□ 0.65
PCNA-202ENST00000379160 UTRNP46939 3433 aa19.1■□□□□ 0.65
PCNA-202ENST00000379160 SLC27A3Q5K4L6 730 aa19.09■□□□□ 0.65
PCNA-202ENST00000379160 SGIP1Q9BQI5 828 aa19.09■□□□□ 0.65
PCNA-202ENST00000379160 CARD14Q9BXL6 1004 aa19.09■□□□□ 0.65
PCNA-202ENST00000379160 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
PCNA-202ENST00000379160 RAPGEF4Q8WZA2 1011 aa19.08■□□□□ 0.65
PCNA-202ENST00000379160 AKT1S1Q96B36 256 aa19.08■□□□□ 0.65
PCNA-202ENST00000379160 SYT17Q9BSW7 474 aa19.08■□□□□ 0.65
PCNA-202ENST00000379160 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
PCNA-202ENST00000379160 NSD2O96028 1365 aa19.07■□□□□ 0.64
PCNA-202ENST00000379160 INSRP06213 1382 aa19.07■□□□□ 0.64
PCNA-202ENST00000379160 FLT4P35916 1363 aa19.07■□□□□ 0.64
PCNA-202ENST00000379160 TIMELESSQ9UNS1 1208 aa19.06■□□□□ 0.64
PCNA-202ENST00000379160 CGNL1Q0VF96 1302 aa19.06■□□□□ 0.64
PCNA-202ENST00000379160 SPDYE4A6NLX3 237 aa19.06■□□□□ 0.64
PCNA-202ENST00000379160 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
PCNA-202ENST00000379160 ARXQ96QS3 562 aa19.06■□□□□ 0.64
PCNA-202ENST00000379160 LY75O60449 1722 aa19.05■□□□□ 0.64
PCNA-202ENST00000379160 TFCP2L1Q9NZI6 479 aa19.05■□□□□ 0.64
PCNA-202ENST00000379160 EMILIN1Q9Y6C2 1016 aa19.05■□□□□ 0.64
PCNA-202ENST00000379160 PPM1GO15355 546 aaPredicted RBP19.04■□□□□ 0.64
PCNA-202ENST00000379160 TUBGCP6Q96RT7 1819 aa19.03■□□□□ 0.64
PCNA-202ENST00000379160 QSER1Q2KHR3 1735 aa19.03■□□□□ 0.64
PCNA-202ENST00000379160 PNPLA7Q6ZV29 1317 aa19.03■□□□□ 0.64
PCNA-202ENST00000379160 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
PCNA-202ENST00000379160 POLR3GLQ9BT43 218 aa19.03■□□□□ 0.64
PCNA-202ENST00000379160 CCNL1Q9UK58 526 aaPredicted RBP19.03■□□□□ 0.64
PCNA-202ENST00000379160 FKBP8Q14318 412 aa19.02■□□□□ 0.64
PCNA-202ENST00000379160 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
PCNA-202ENST00000379160 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
PCNA-202ENST00000379160 SLC16A10Q8TF71 515 aa19.01■□□□□ 0.63
PCNA-202ENST00000379160 KLHL34Q8N239 644 aa19■□□□□ 0.63
PCNA-202ENST00000379160 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
PCNA-202ENST00000379160 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
PCNA-202ENST00000379160 CYP27B1O15528 508 aa18.98■□□□□ 0.63
PCNA-202ENST00000379160 POLD1P28340 1107 aa18.98■□□□□ 0.63
PCNA-202ENST00000379160 MPRIPQ6WCQ1 1025 aa18.98■□□□□ 0.63
PCNA-202ENST00000379160 GOLGB1Q14789 3259 aaKnown RBP18.97■□□□□ 0.63
PCNA-202ENST00000379160 MAP3K5Q99683 1374 aa18.97■□□□□ 0.63
PCNA-202ENST00000379160 ANKRD26Q9UPS8 1709 aa18.96■□□□□ 0.63
PCNA-202ENST00000379160 SSUH2Q9Y2M2 353 aa18.95■□□□□ 0.62
PCNA-202ENST00000379160 WASHC2AQ641Q2 1341 aa18.95■□□□□ 0.62
PCNA-202ENST00000379160 COL24A1Q17RW2 1714 aa18.95■□□□□ 0.62
PCNA-202ENST00000379160 PKD1L3Q7Z443 1732 aa18.95■□□□□ 0.62
PCNA-202ENST00000379160 TOGARAM1Q9Y4F4 1720 aa18.95■□□□□ 0.62
PCNA-202ENST00000379160 C5P01031 1676 aa18.94■□□□□ 0.62
PCNA-202ENST00000379160 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
PCNA-202ENST00000379160 COL23A1Q86Y22 540 aaPredicted RBP18.94■□□□□ 0.62
PCNA-202ENST00000379160 ITGB4P16144 1822 aa18.94■□□□□ 0.62
PCNA-202ENST00000379160 PALLDQ8WX93 1383 aa18.94■□□□□ 0.62
PCNA-202ENST00000379160 EYA1Q99502 592 aa18.93■□□□□ 0.62
PCNA-202ENST00000379160 POLKQ9UBT6 870 aa18.93■□□□□ 0.62
PCNA-202ENST00000379160 GPR162Q16538 588 aa18.93■□□□□ 0.62
PCNA-202ENST00000379160 SPG7Q9UQ90 795 aa18.93■□□□□ 0.62
PCNA-202ENST00000379160 NCAPD2Q15021 1401 aa18.92■□□□□ 0.62
PCNA-202ENST00000379160 CHD4Q14839 1912 aa18.92■□□□□ 0.62
PCNA-202ENST00000379160 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
PCNA-202ENST00000379160 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
PCNA-202ENST00000379160 TAF1LQ8IZX4 1826 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms