RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 IL13P35225 146 aa29.65■■■□□ 2.34
GFRA3-202ENST00000378362 APBA3O96018 575 aa29.64■■■□□ 2.34
GFRA3-202ENST00000378362 SBF2Q86WG5 1849 aa29.63■■■□□ 2.33
GFRA3-202ENST00000378362 PPP2R1AP30153 589 aa29.62■■■□□ 2.33
GFRA3-202ENST00000378362 IGSF1Q8N6C5 1336 aa29.61■■■□□ 2.33
GFRA3-202ENST00000378362 SHANK3Q9BYB0 1731 aa29.6■■■□□ 2.33
GFRA3-202ENST00000378362 TNS1Q9HBL0 1735 aaKnown RBP29.6■■■□□ 2.33
GFRA3-202ENST00000378362 SULT6B1Q6IMI4 303 aa29.59■■■□□ 2.33
GFRA3-202ENST00000378362 RGPD1P0DJD0 1748 aa29.59■■■□□ 2.33
GFRA3-202ENST00000378362 HMOX1P09601 288 aa29.59■■■□□ 2.33
GFRA3-202ENST00000378362 BAG6P46379 1132 aa29.59■■■□□ 2.33
GFRA3-202ENST00000378362 NCAPD2Q15021 1401 aa29.59■■■□□ 2.33
GFRA3-202ENST00000378362 ZNF316A6NFI3 1004 aaPredicted RBP29.58■■■□□ 2.33
GFRA3-202ENST00000378362 EZH2Q15910 746 aaKnown RBP29.58■■■□□ 2.33
GFRA3-202ENST00000378362 DIAPH1O60610 1272 aaKnown RBP29.57■■■□□ 2.32
GFRA3-202ENST00000378362 CYP27B1O15528 508 aa29.57■■■□□ 2.32
GFRA3-202ENST00000378362 SYTL4Q96C24 671 aaPredicted RBP29.55■■■□□ 2.32
GFRA3-202ENST00000378362 BCL11BQ9C0K0 894 aaPredicted RBP29.55■■■□□ 2.32
GFRA3-202ENST00000378362 U2SURPO15042 1029 aaKnown RBP29.54■■■□□ 2.32
GFRA3-202ENST00000378362 PARD3Q8TEW0 1356 aa29.52■■■□□ 2.32
GFRA3-202ENST00000378362 COL3A1P02461 1466 aaPredicted RBP29.52■■■□□ 2.32
GFRA3-202ENST00000378362 PRIM1P49642 420 aaKnown RBP29.52■■■□□ 2.32
GFRA3-202ENST00000378362 CAMKK2Q96RR4 588 aa29.52■■■□□ 2.32
GFRA3-202ENST00000378362 PCDH11XQ9BZA7 1347 aa29.51■■■□□ 2.31
GFRA3-202ENST00000378362 PCDH11YQ9BZA8 1340 aa29.51■■■□□ 2.31
GFRA3-202ENST00000378362 BCL9O00512 1426 aa29.5■■■□□ 2.31
GFRA3-202ENST00000378362 SPG7Q9UQ90 795 aa29.5■■■□□ 2.31
GFRA3-202ENST00000378362 PKD1L3Q7Z443 1732 aa29.46■■■□□ 2.31
GFRA3-202ENST00000378362 CFAP53Q96M91 514 aa29.46■■■□□ 2.31
GFRA3-202ENST00000378362 DOT1LQ8TEK3 1739 aa29.45■■■□□ 2.3
GFRA3-202ENST00000378362 KDRP35968 1356 aa29.44■■■□□ 2.3
GFRA3-202ENST00000378362 PHKG2P15735 406 aa29.43■■■□□ 2.3
GFRA3-202ENST00000378362 PROM2Q8N271 834 aa29.43■■■□□ 2.3
GFRA3-202ENST00000378362 NHSQ6T4R5 1651 aa29.43■■■□□ 2.3
GFRA3-202ENST00000378362 PLEKHO1Q53GL0 409 aaPredicted RBP29.43■■■□□ 2.3
GFRA3-202ENST00000378362 ZNF530Q6P9A1 599 aaPredicted RBP29.43■■■□□ 2.3
GFRA3-202ENST00000378362 MPRIPQ6WCQ1 1025 aa29.42■■■□□ 2.3
GFRA3-202ENST00000378362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.42■■■□□ 2.3
GFRA3-202ENST00000378362 BTAF1O14981 1849 aa29.42■■■□□ 2.3
GFRA3-202ENST00000378362 IFNL2Q8IZJ0 200 aa29.41■■■□□ 2.3
GFRA3-202ENST00000378362 RALBP1Q15311 655 aa29.41■■■□□ 2.3
GFRA3-202ENST00000378362 PSDA5PKW4 1024 aaPredicted RBP29.39■■■□□ 2.3
GFRA3-202ENST00000378362 U2AF1L5P0DN76 240 aaPredicted RBP29.39■■■□□ 2.3
GFRA3-202ENST00000378362 KCNQ4P56696 695 aa29.39■■■□□ 2.3
GFRA3-202ENST00000378362 U2AF1Q01081 240 aaKnown RBP eCLIP29.39■■■□□ 2.3
GFRA3-202ENST00000378362 PLSCR1O15162 318 aa29.38■■■□□ 2.29
GFRA3-202ENST00000378362 TOGARAM1Q9Y4F4 1720 aa29.38■■■□□ 2.29
GFRA3-202ENST00000378362 AMOTQ4VCS5 1084 aa29.36■■■□□ 2.29
GFRA3-202ENST00000378362 PRKRIP1Q9H875 184 aaPredicted RBP29.36■■■□□ 2.29
GFRA3-202ENST00000378362 NKX1-1Q15270 411 aaPredicted RBP29.36■■■□□ 2.29
GFRA3-202ENST00000378362 TXNRD1Q16881 649 aa29.36■■■□□ 2.29
GFRA3-202ENST00000378362 MTHFSDQ2M296 383 aaKnown RBP29.35■■■□□ 2.29
GFRA3-202ENST00000378362 NUDCQ9Y266 331 aa29.35■■■□□ 2.29
GFRA3-202ENST00000378362 PRKAR2BP31323 418 aa29.34■■■□□ 2.29
GFRA3-202ENST00000378362 PHACTR3Q96KR7 559 aa29.34■■■□□ 2.29
GFRA3-202ENST00000378362 ITGB4P16144 1822 aa29.33■■■□□ 2.29
GFRA3-202ENST00000378362 PIGBQ92521 554 aa29.33■■■□□ 2.29
GFRA3-202ENST00000378362 R3HDM1Q15032 1099 aaKnown RBP29.32■■■□□ 2.28
GFRA3-202ENST00000378362 C1orf141Q5JVX7 400 aa29.32■■■□□ 2.28
GFRA3-202ENST00000378362 RSPH6AQ9H0K4 717 aa29.32■■■□□ 2.28
GFRA3-202ENST00000378362 MYBBP1AQ9BQG0 1328 aaKnown RBP29.32■■■□□ 2.28
GFRA3-202ENST00000378362 RREB1Q92766 1687 aa29.3■■■□□ 2.28
GFRA3-202ENST00000378362 LRRC4BQ9NT99 713 aa29.3■■■□□ 2.28
GFRA3-202ENST00000378362 NUP188Q5SRE5 1749 aa29.29■■■□□ 2.28
GFRA3-202ENST00000378362 KDM6AO15550 1401 aaPredicted RBP29.29■■■□□ 2.28
GFRA3-202ENST00000378362 LGR6Q9HBX8 967 aa29.29■■■□□ 2.28
GFRA3-202ENST00000378362 ANO8Q9HCE9 1232 aaPredicted RBP29.29■■■□□ 2.28
GFRA3-202ENST00000378362 TMOD3Q9NYL9 352 aa29.27■■■□□ 2.28
GFRA3-202ENST00000378362 DCAF5Q96JK2 942 aa29.27■■■□□ 2.28
GFRA3-202ENST00000378362 ASAP1Q9ULH1 1129 aa29.26■■■□□ 2.27
GFRA3-202ENST00000378362 AKAP4Q5JQC9 854 aa29.24■■■□□ 2.27
GFRA3-202ENST00000378362 HSP90AB1P08238 724 aaKnown RBP29.23■■■□□ 2.27
GFRA3-202ENST00000378362 NFATC2IPQ8NCF5 419 aa29.23■■■□□ 2.27
GFRA3-202ENST00000378362 RGPD3A6NKT7 1758 aaPredicted RBP29.23■■■□□ 2.27
GFRA3-202ENST00000378362 RGPD4Q7Z3J3 1758 aa29.23■■■□□ 2.27
GFRA3-202ENST00000378362 PLEKHG2Q9H7P9 1386 aa29.22■■■□□ 2.27
GFRA3-202ENST00000378362 FCHSD2O94868 740 aa29.22■■■□□ 2.27
GFRA3-202ENST00000378362 CABP4P57796 275 aa29.22■■■□□ 2.27
GFRA3-202ENST00000378362 CCDC184Q52MB2 194 aa29.21■■■□□ 2.27
GFRA3-202ENST00000378362 NBPF14Q5TI25 921 aa29.21■■■□□ 2.27
GFRA3-202ENST00000378362 PALLDQ8WX93 1383 aa29.2■■■□□ 2.27
GFRA3-202ENST00000378362 ERVV-2B6SEH9 535 aa29.2■■■□□ 2.27
GFRA3-202ENST00000378362 CCNL1Q9UK58 526 aaPredicted RBP29.2■■■□□ 2.27
GFRA3-202ENST00000378362 PDGFDQ9GZP0 370 aaPredicted RBP29.2■■■□□ 2.26
GFRA3-202ENST00000378362 RNMTO43148 476 aaKnown RBP29.19■■■□□ 2.26
GFRA3-202ENST00000378362 ATG3Q9NT62 314 aa29.19■■■□□ 2.26
GFRA3-202ENST00000378362 VIRMAQ69YN4 1812 aaKnown RBP29.17■■■□□ 2.26
GFRA3-202ENST00000378362 ZNF827Q17R98 1081 aa29.17■■■□□ 2.26
GFRA3-202ENST00000378362 GAS2L2Q8NHY3 880 aa29.17■■■□□ 2.26
GFRA3-202ENST00000378362 SCN11AQ9UI33 1791 aa29.16■■■□□ 2.26
GFRA3-202ENST00000378362 LY75O60449 1722 aa29.16■■■□□ 2.26
GFRA3-202ENST00000378362 IL17REQ8NFR9 667 aa29.15■■■□□ 2.26
GFRA3-202ENST00000378362 GNAT3A8MTJ3 354 aa29.15■■■□□ 2.26
GFRA3-202ENST00000378362 CCDC146Q8IYE0 955 aa29.14■■■□□ 2.26
GFRA3-202ENST00000378362 PLEKHF1Q96S99 279 aa29.14■■■□□ 2.26
GFRA3-202ENST00000378362 ANP32CO43423 234 aa29.13■■■□□ 2.25
GFRA3-202ENST00000378362 DCTN1Q14203 1278 aa29.13■■■□□ 2.25
GFRA3-202ENST00000378362 SLC27A3Q5K4L6 730 aa29.13■■■□□ 2.25
GFRA3-202ENST00000378362 MAP3K5Q99683 1374 aa29.13■■■□□ 2.25
GFRA3-202ENST00000378362 SLC39A6Q13433 755 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms