RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PYCARDQ9ULZ3 195 aa19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 CHMP4BQ9H444 224 aaKnown RBP19.04■□□□□ 0.64
CSNK1A1-202ENST00000377843 TSPYL6Q8N831 410 aa19.04■□□□□ 0.64
CSNK1A1-202ENST00000377843 KCNF1Q9H3M0 494 aa19.04■□□□□ 0.64
CSNK1A1-202ENST00000377843 DEPDC5O75140 1603 aa19.04■□□□□ 0.64
CSNK1A1-202ENST00000377843 USP32Q8NFA0 1604 aa19.04■□□□□ 0.64
CSNK1A1-202ENST00000377843 VGLL3A8MV65 326 aa19.03■□□□□ 0.64
CSNK1A1-202ENST00000377843 BRPF1P55201 1214 aaPredicted RBP19.03■□□□□ 0.64
CSNK1A1-202ENST00000377843 MYOM2P54296 1465 aa19.03■□□□□ 0.64
CSNK1A1-202ENST00000377843 PTCH1Q13635 1447 aa19.02■□□□□ 0.64
CSNK1A1-202ENST00000377843 AP5Z1O43299 807 aa19.02■□□□□ 0.64
CSNK1A1-202ENST00000377843 HCLS1P14317 486 aaPredicted RBP19.02■□□□□ 0.64
CSNK1A1-202ENST00000377843 UVSSAQ2YD98 709 aa19.02■□□□□ 0.64
CSNK1A1-202ENST00000377843 KIAA1524Q8TCG1 905 aa19.02■□□□□ 0.64
CSNK1A1-202ENST00000377843 COL3A1P02461 1466 aaPredicted RBP19.02■□□□□ 0.63
CSNK1A1-202ENST00000377843 ABCC4O15439 1325 aa19.02■□□□□ 0.63
CSNK1A1-202ENST00000377843 CTIFO43310 598 aaKnown RBP19.01■□□□□ 0.63
CSNK1A1-202ENST00000377843 VAMP4O75379 141 aa19.01■□□□□ 0.63
CSNK1A1-202ENST00000377843 USP48Q86UV5 1035 aa19.01■□□□□ 0.63
CSNK1A1-202ENST00000377843 NEK4P51957 841 aa19■□□□□ 0.63
CSNK1A1-202ENST00000377843 SYAP1Q96A49 352 aaPredicted RBP19■□□□□ 0.63
CSNK1A1-202ENST00000377843 DCTPP1Q9H773 170 aa19■□□□□ 0.63
CSNK1A1-202ENST00000377843 GLI2P10070 1586 aa19■□□□□ 0.63
CSNK1A1-202ENST00000377843 DIP2CQ9Y2E4 1556 aa19■□□□□ 0.63
CSNK1A1-202ENST00000377843 ELL2O00472 640 aaPredicted RBP19■□□□□ 0.63
CSNK1A1-202ENST00000377843 ZNF771Q7L3S4 317 aaPredicted RBP19■□□□□ 0.63
CSNK1A1-202ENST00000377843 RICTORQ6R327 1708 aa19■□□□□ 0.63
CSNK1A1-202ENST00000377843 VWDEQ8N2E2 1590 aa19■□□□□ 0.63
CSNK1A1-202ENST00000377843 KNDC1Q76NI1 1749 aa18.99■□□□□ 0.63
CSNK1A1-202ENST00000377843 FAM184AQ8NB25 1140 aa18.99■□□□□ 0.63
CSNK1A1-202ENST00000377843 THUMPD2Q9BTF0 503 aaKnown RBP18.99■□□□□ 0.63
CSNK1A1-202ENST00000377843 TPRNQ4KMQ1 711 aa18.99■□□□□ 0.63
CSNK1A1-202ENST00000377843 NOL8Q76FK4 1167 aaKnown RBP18.99■□□□□ 0.63
CSNK1A1-202ENST00000377843 NPATQ14207 1427 aa18.99■□□□□ 0.63
CSNK1A1-202ENST00000377843 ARHGAP45Q92619 1136 aa18.98■□□□□ 0.63
CSNK1A1-202ENST00000377843 NCBP1Q09161 790 aaKnown RBP18.98■□□□□ 0.63
CSNK1A1-202ENST00000377843 FBXO31Q5XUX0 539 aaPredicted RBP18.98■□□□□ 0.63
CSNK1A1-202ENST00000377843 TMEM132EQ6IEE7 984 aa18.98■□□□□ 0.63
CSNK1A1-202ENST00000377843 TET3O43151 1660 aa18.98■□□□□ 0.63
CSNK1A1-202ENST00000377843 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
CSNK1A1-202ENST00000377843 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
CSNK1A1-202ENST00000377843 CUL4AQ13619 759 aa18.97■□□□□ 0.63
CSNK1A1-202ENST00000377843 KDM4AO75164 1064 aa18.97■□□□□ 0.63
CSNK1A1-202ENST00000377843 PHF14O94880 888 aa18.97■□□□□ 0.63
CSNK1A1-202ENST00000377843 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
CSNK1A1-202ENST00000377843 APBB1O00213 710 aa18.96■□□□□ 0.63
CSNK1A1-202ENST00000377843 DIAPH3Q9NSV4 1193 aa18.96■□□□□ 0.63
CSNK1A1-202ENST00000377843 OGFRQ9NZT2 677 aa18.96■□□□□ 0.63
CSNK1A1-202ENST00000377843 CFAP44Q96MT7 982 aa18.96■□□□□ 0.63
CSNK1A1-202ENST00000377843 FEZ1Q99689 392 aa18.96■□□□□ 0.63
CSNK1A1-202ENST00000377843 NRXN1Q9ULB1 1477 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 SLFN14P0C7P3 912 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 NAA30Q147X3 362 aaPredicted RBP18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 TAF3Q5VWG9 929 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 CTNNA3Q9UI47 895 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 PALD1Q9ULE6 856 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 NSD2O96028 1365 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 EFCAB6Q5THR3 1501 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 QRICH2Q9H0J4 1663 aa18.95■□□□□ 0.62
CSNK1A1-202ENST00000377843 REC8O95072 547 aa18.94■□□□□ 0.62
CSNK1A1-202ENST00000377843 ERC2O15083 957 aa18.94■□□□□ 0.62
CSNK1A1-202ENST00000377843 CCDC183Q5T5S1 534 aa18.93■□□□□ 0.62
CSNK1A1-202ENST00000377843 ZNF428Q96B54 188 aa18.93■□□□□ 0.62
CSNK1A1-202ENST00000377843 SPC24Q8NBT2 197 aa18.93■□□□□ 0.62
CSNK1A1-202ENST00000377843 CHAF1AQ13111 956 aaPredicted RBP18.92■□□□□ 0.62
CSNK1A1-202ENST00000377843 CASC1Q6TDU7 716 aa18.92■□□□□ 0.62
CSNK1A1-202ENST00000377843 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
CSNK1A1-202ENST00000377843 IRX5P78411 483 aaPredicted RBP18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 ABCC3O15438 1527 aa18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 IPO4Q8TEX9 1081 aaKnown RBP18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 FUCA2Q9BTY2 467 aa18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 CNPY2Q9Y2B0 182 aa18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 ATP10DQ9P241 1426 aa18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 KIF13AQ9H1H9 1805 aa18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 NEURL4Q96JN8 1562 aa18.91■□□□□ 0.62
CSNK1A1-202ENST00000377843 MX1P20591 662 aa18.9■□□□□ 0.62
CSNK1A1-202ENST00000377843 MROH2AA6NES4 1674 aa18.9■□□□□ 0.62
CSNK1A1-202ENST00000377843 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
CSNK1A1-202ENST00000377843 IFT172Q9UG01 1749 aa18.9■□□□□ 0.62
CSNK1A1-202ENST00000377843 GABPB1Q06547 395 aaPredicted RBP18.89■□□□□ 0.62
CSNK1A1-202ENST00000377843 IDI1Q13907 227 aa18.89■□□□□ 0.62
CSNK1A1-202ENST00000377843 GIMAP6Q6P9H5 292 aa18.89■□□□□ 0.62
CSNK1A1-202ENST00000377843 INTS4Q96HW7 963 aaKnown RBP18.89■□□□□ 0.62
CSNK1A1-202ENST00000377843 DDX41Q9UJV9 622 aaKnown RBP18.89■□□□□ 0.62
CSNK1A1-202ENST00000377843 ANKRD44Q8N8A2 993 aa18.89■□□□□ 0.61
CSNK1A1-202ENST00000377843 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
CSNK1A1-202ENST00000377843 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 KCNJ4P48050 445 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 C8orf58Q8NAV2 365 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 PHACTR3Q96KR7 559 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 MBIPQ9NS73 344 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 PRKAR2BP31323 418 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 TMEM87AQ8NBN3 555 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 A0A1W2PP64 1363 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 RPAP1Q9BWH6 1393 aaPredicted RBP18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 ADGRB1O14514 1584 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms