RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 LRRFIP2Q9Y608 721 aaKnown RBP14.07□□□□□ -0.16
SEC23B-204ENST00000377475 MSH6P52701 1360 aa14.07□□□□□ -0.16
SEC23B-204ENST00000377475 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
SEC23B-204ENST00000377475 PRDM10Q9NQV6 1147 aa14.07□□□□□ -0.16
SEC23B-204ENST00000377475 SPG7Q9UQ90 795 aa14.07□□□□□ -0.16
SEC23B-204ENST00000377475 PLXNC1O60486 1568 aa14.06□□□□□ -0.16
SEC23B-204ENST00000377475 NLRP6P59044 892 aa14.06□□□□□ -0.16
SEC23B-204ENST00000377475 CWC27Q6UX04 472 aaKnown RBP14.06□□□□□ -0.16
SEC23B-204ENST00000377475 ZCCHC11Q5TAX3 1644 aaKnown RBP14.06□□□□□ -0.16
SEC23B-204ENST00000377475 MAP3K4Q9Y6R4 1608 aa14.06□□□□□ -0.16
SEC23B-204ENST00000377475 CEBPAP49715 358 aaPredicted RBP14.06□□□□□ -0.16
SEC23B-204ENST00000377475 ANKRD44Q8N8A2 993 aa14.06□□□□□ -0.16
SEC23B-204ENST00000377475 SPC24Q8NBT2 197 aa14.06□□□□□ -0.16
SEC23B-204ENST00000377475 IQGAP1P46940 1657 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 AK9Q5TCS8 1911 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 GNAI2P04899 355 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 FERMT3Q86UX7 667 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 JARID2Q92833 1246 aaPredicted RBP14.05□□□□□ -0.16
SEC23B-204ENST00000377475 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 TCEANC2Q96MN5 208 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 TMEM63CQ9P1W3 806 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 NSD2O96028 1365 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 PDE1AP54750 535 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 AIMP1Q12904 312 aaKnown RBP14.05□□□□□ -0.16
SEC23B-204ENST00000377475 SPHKAPQ2M3C7 1700 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 GPT2Q8TD30 523 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 LRRCC1Q9C099 1032 aa14.05□□□□□ -0.16
SEC23B-204ENST00000377475 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
SEC23B-204ENST00000377475 RPAP2Q8IXW5 612 aaPredicted RBP14.04□□□□□ -0.16
SEC23B-204ENST00000377475 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
SEC23B-204ENST00000377475 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
SEC23B-204ENST00000377475 UNC5CLQ8IV45 518 aa14.04□□□□□ -0.16
SEC23B-204ENST00000377475 YTHDC2Q9H6S0 1430 aaKnown RBP14.04□□□□□ -0.16
SEC23B-204ENST00000377475 MTHFSDQ2M296 383 aaKnown RBP14.03□□□□□ -0.16
SEC23B-204ENST00000377475 USP25Q9UHP3 1055 aa14.03□□□□□ -0.16
SEC23B-204ENST00000377475 UQCRHLA0A096LP55 91 aa14.03□□□□□ -0.16
SEC23B-204ENST00000377475 UQCRHP07919 91 aa14.03□□□□□ -0.16
SEC23B-204ENST00000377475 UBTFL1P0CB47 393 aaPredicted RBP14.03□□□□□ -0.16
SEC23B-204ENST00000377475 MX1P20591 662 aa14.03□□□□□ -0.16
SEC23B-204ENST00000377475 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
SEC23B-204ENST00000377475 MYOM1P52179 1685 aa14.02□□□□□ -0.16
SEC23B-204ENST00000377475 PTMSP20962 102 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 SIL1Q9H173 461 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 CEP152O94986 1710 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 IQSEC2Q5JU85 1478 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 SRGAP3O43295 1099 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 DRC7Q8IY82 874 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 ARHGAP45Q92619 1136 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 PKNOX2Q96KN3 472 aa14.02□□□□□ -0.17
SEC23B-204ENST00000377475 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
SEC23B-204ENST00000377475 ACEP12821 1306 aa14.01□□□□□ -0.17
SEC23B-204ENST00000377475 STK3Q13188 491 aa14.01□□□□□ -0.17
SEC23B-204ENST00000377475 PHAXQ9H814 394 aaKnown RBP14.01□□□□□ -0.17
SEC23B-204ENST00000377475 ABCC4O15439 1325 aa14.01□□□□□ -0.17
SEC23B-204ENST00000377475 FLIIQ13045 1269 aa14.01□□□□□ -0.17
SEC23B-204ENST00000377475 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
SEC23B-204ENST00000377475 TTC12Q9H892 705 aaPredicted RBP14.01□□□□□ -0.17
SEC23B-204ENST00000377475 LAMC1P11047 1609 aa14.01□□□□□ -0.17
SEC23B-204ENST00000377475 YEATS2Q9ULM3 1422 aa14□□□□□ -0.17
SEC23B-204ENST00000377475 MYOM2P54296 1465 aa14□□□□□ -0.17
SEC23B-204ENST00000377475 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
SEC23B-204ENST00000377475 CAMK4Q16566 473 aa14□□□□□ -0.17
SEC23B-204ENST00000377475 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
SEC23B-204ENST00000377475 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
SEC23B-204ENST00000377475 CEBPZQ03701 1054 aaKnown RBP13.99□□□□□ -0.17
SEC23B-204ENST00000377475 FAM173BQ6P4H8 233 aa13.99□□□□□ -0.17
SEC23B-204ENST00000377475 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
SEC23B-204ENST00000377475 FGD1P98174 961 aa13.99□□□□□ -0.17
SEC23B-204ENST00000377475 CCDC83Q8IWF9 413 aa13.99□□□□□ -0.17
SEC23B-204ENST00000377475 KIAA2012Q0VF49 1180 aa13.99□□□□□ -0.17
SEC23B-204ENST00000377475 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
SEC23B-204ENST00000377475 TSPY26PQ9H489 355 aa13.99□□□□□ -0.17
SEC23B-204ENST00000377475 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
SEC23B-204ENST00000377475 GOLGA6L4A6NEF3 574 aa13.98□□□□□ -0.17
SEC23B-204ENST00000377475 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
SEC23B-204ENST00000377475 DIAPH3Q9NSV4 1193 aa13.98□□□□□ -0.17
SEC23B-204ENST00000377475 ZDHHC9Q9Y397 364 aa13.98□□□□□ -0.17
SEC23B-204ENST00000377475 SMC3Q9UQE7 1217 aa13.98□□□□□ -0.17
SEC23B-204ENST00000377475 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
SEC23B-204ENST00000377475 GIMAP6Q6P9H5 292 aa13.97□□□□□ -0.17
SEC23B-204ENST00000377475 USP48Q86UV5 1035 aa13.97□□□□□ -0.17
SEC23B-204ENST00000377475 ESYT1Q9BSJ8 1104 aa13.97□□□□□ -0.17
SEC23B-204ENST00000377475 KIF1BO60333 1816 aa13.97□□□□□ -0.17
SEC23B-204ENST00000377475 TET3O43151 1660 aa13.97□□□□□ -0.17
SEC23B-204ENST00000377475 RRP9O43818 475 aaKnown RBP13.97□□□□□ -0.17
SEC23B-204ENST00000377475 ABTB2Q8N961 1025 aa13.97□□□□□ -0.17
SEC23B-204ENST00000377475 C9orf78Q9NZ63 289 aaPredicted RBP13.97□□□□□ -0.17
SEC23B-204ENST00000377475 TAF7Q15545 349 aaPredicted RBP13.97□□□□□ -0.17
SEC23B-204ENST00000377475 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
SEC23B-204ENST00000377475 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.17
SEC23B-204ENST00000377475 PPP1R42Q7Z4L9 355 aa13.96□□□□□ -0.17
SEC23B-204ENST00000377475 DDIT3P35638 169 aa13.96□□□□□ -0.17
SEC23B-204ENST00000377475 SYAP1Q96A49 352 aaPredicted RBP13.96□□□□□ -0.17
SEC23B-204ENST00000377475 PA2G4Q9UQ80 394 aaKnown RBP13.96□□□□□ -0.17
SEC23B-204ENST00000377475 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.18
SEC23B-204ENST00000377475 MAP3K19Q56UN5 1328 aa13.96□□□□□ -0.18
SEC23B-204ENST00000377475 EFCAB6Q5THR3 1501 aa13.96□□□□□ -0.18
SEC23B-204ENST00000377475 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
SEC23B-204ENST00000377475 KDM4AO75164 1064 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms