RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 PNISRQ8TF01 805 aaKnown RBP23.57■■□□□ 1.36
C6orf48-204ENST00000375639 MEGF6O75095 1541 aa23.57■■□□□ 1.36
C6orf48-204ENST00000375639 DISP2A7MBM2 1401 aa23.57■■□□□ 1.36
C6orf48-204ENST00000375639 FCHSD2O94868 740 aa23.56■■□□□ 1.36
C6orf48-204ENST00000375639 SEPT12Q8IYM1 358 aa23.56■■□□□ 1.36
C6orf48-204ENST00000375639 RSPH6AQ9H0K4 717 aa23.56■■□□□ 1.36
C6orf48-204ENST00000375639 ADAMTS8Q9UP79 889 aa23.56■■□□□ 1.36
C6orf48-204ENST00000375639 PRKAR2BP31323 418 aa23.55■■□□□ 1.36
C6orf48-204ENST00000375639 EXOC5O00471 708 aa23.54■■□□□ 1.36
C6orf48-204ENST00000375639 DDB1Q16531 1140 aa23.54■■□□□ 1.36
C6orf48-204ENST00000375639 LRP5O75197 1615 aa23.54■■□□□ 1.36
C6orf48-204ENST00000375639 WNK3Q9BYP7 1800 aa23.54■■□□□ 1.36
C6orf48-204ENST00000375639 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
C6orf48-204ENST00000375639 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
C6orf48-204ENST00000375639 PNNQ9H307 717 aaKnown RBP23.53■■□□□ 1.36
C6orf48-204ENST00000375639 OVOS2A0A0G2JMS6 1433 aa23.52■■□□□ 1.36
C6orf48-204ENST00000375639 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
C6orf48-204ENST00000375639 THSD7AQ9UPZ6 1657 aa23.51■■□□□ 1.35
C6orf48-204ENST00000375639 PARP4Q9UKK3 1724 aaKnown RBP23.51■■□□□ 1.35
C6orf48-204ENST00000375639 NEFMP07197 916 aa23.51■■□□□ 1.35
C6orf48-204ENST00000375639 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
C6orf48-204ENST00000375639 PDE3BQ13370 1112 aa23.5■■□□□ 1.35
C6orf48-204ENST00000375639 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
C6orf48-204ENST00000375639 CCDC146Q8IYE0 955 aa23.49■■□□□ 1.35
C6orf48-204ENST00000375639 DDX54Q8TDD1 881 aaKnown RBP23.49■■□□□ 1.35
C6orf48-204ENST00000375639 PHACTR3Q96KR7 559 aa23.48■■□□□ 1.35
C6orf48-204ENST00000375639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.48■■□□□ 1.35
C6orf48-204ENST00000375639 PLEKHF1Q96S99 279 aa23.47■■□□□ 1.35
C6orf48-204ENST00000375639 MAPK8IP3Q9UPT6 1336 aa23.47■■□□□ 1.35
C6orf48-204ENST00000375639 TNS2Q63HR2 1409 aa23.47■■□□□ 1.35
C6orf48-204ENST00000375639 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
C6orf48-204ENST00000375639 PLEKHG2Q9H7P9 1386 aa23.46■■□□□ 1.35
C6orf48-204ENST00000375639 PCDH11XQ9BZA7 1347 aa23.45■■□□□ 1.34
C6orf48-204ENST00000375639 PCDH11YQ9BZA8 1340 aa23.45■■□□□ 1.34
C6orf48-204ENST00000375639 MTHFSDQ2M296 383 aaKnown RBP23.45■■□□□ 1.34
C6orf48-204ENST00000375639 ZNF530Q6P9A1 599 aaPredicted RBP23.45■■□□□ 1.34
C6orf48-204ENST00000375639 KRT27Q7Z3Y8 459 aa23.45■■□□□ 1.34
C6orf48-204ENST00000375639 RUNDC1Q96C34 613 aa23.45■■□□□ 1.34
C6orf48-204ENST00000375639 BRWD3Q6RI45 1802 aa23.43■■□□□ 1.34
C6orf48-204ENST00000375639 PKD1L3Q7Z443 1732 aa23.43■■□□□ 1.34
C6orf48-204ENST00000375639 MARCH10Q8NA82 808 aaPredicted RBP23.43■■□□□ 1.34
C6orf48-204ENST00000375639 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
C6orf48-204ENST00000375639 CYP27B1O15528 508 aa23.42■■□□□ 1.34
C6orf48-204ENST00000375639 C1orf141Q5JVX7 400 aa23.42■■□□□ 1.34
C6orf48-204ENST00000375639 FAM182BQ5T319 152 aa23.42■■□□□ 1.34
C6orf48-204ENST00000375639 DEFB132Q7Z7B7 95 aa23.42■■□□□ 1.34
C6orf48-204ENST00000375639 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
C6orf48-204ENST00000375639 PHKG2P15735 406 aa23.4■■□□□ 1.34
C6orf48-204ENST00000375639 SHANK3Q9BYB0 1731 aa23.39■■□□□ 1.34
C6orf48-204ENST00000375639 NFE2L2Q16236 605 aa23.38■■□□□ 1.33
C6orf48-204ENST00000375639 AKAP4Q5JQC9 854 aa23.38■■□□□ 1.33
C6orf48-204ENST00000375639 APAF1O14727 1248 aa23.37■■□□□ 1.33
C6orf48-204ENST00000375639 NEUROD2Q15784 382 aa23.37■■□□□ 1.33
C6orf48-204ENST00000375639 RRP7AQ9Y3A4 280 aaKnown RBP23.37■■□□□ 1.33
C6orf48-204ENST00000375639 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
C6orf48-204ENST00000375639 TMPOP42166 694 aaKnown RBP23.36■■□□□ 1.33
C6orf48-204ENST00000375639 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
C6orf48-204ENST00000375639 HSP90AB1P08238 724 aaKnown RBP23.35■■□□□ 1.33
C6orf48-204ENST00000375639 MPRIPQ6WCQ1 1025 aa23.35■■□□□ 1.33
C6orf48-204ENST00000375639 RIPK4P57078 832 aa23.34■■□□□ 1.33
C6orf48-204ENST00000375639 NKX1-1Q15270 411 aaPredicted RBP23.34■■□□□ 1.33
C6orf48-204ENST00000375639 FAM196AQ6ZSG2 479 aa23.34■■□□□ 1.33
C6orf48-204ENST00000375639 MAP3K5Q99683 1374 aa23.34■■□□□ 1.33
C6orf48-204ENST00000375639 SF3B2Q13435 895 aaKnown RBP23.33■■□□□ 1.33
C6orf48-204ENST00000375639 RTF1Q92541 710 aaKnown RBP23.32■■□□□ 1.32
C6orf48-204ENST00000375639 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
C6orf48-204ENST00000375639 ACSBG1Q96GR2 724 aa23.31■■□□□ 1.32
C6orf48-204ENST00000375639 KAT6BQ8WYB5 2073 aa23.3■■□□□ 1.32
C6orf48-204ENST00000375639 RNMTO43148 476 aaKnown RBP23.3■■□□□ 1.32
C6orf48-204ENST00000375639 LGR6Q9HBX8 967 aa23.3■■□□□ 1.32
C6orf48-204ENST00000375639 HTATSF1O43719 755 aaKnown RBP23.29■■□□□ 1.32
C6orf48-204ENST00000375639 SYTL4Q96C24 671 aaPredicted RBP23.29■■□□□ 1.32
C6orf48-204ENST00000375639 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
C6orf48-204ENST00000375639 DLG5Q8TDM6 1919 aa23.28■■□□□ 1.32
C6orf48-204ENST00000375639 KDM6AO15550 1401 aaPredicted RBP23.28■■□□□ 1.32
C6orf48-204ENST00000375639 PSDA5PKW4 1024 aaPredicted RBP23.28■■□□□ 1.32
C6orf48-204ENST00000375639 LMOD3Q0VAK6 560 aa23.28■■□□□ 1.32
C6orf48-204ENST00000375639 DCTN1Q14203 1278 aa23.28■■□□□ 1.32
C6orf48-204ENST00000375639 MCM10Q7L590 875 aa23.28■■□□□ 1.32
C6orf48-204ENST00000375639 IL17REQ8NFR9 667 aa23.28■■□□□ 1.32
C6orf48-204ENST00000375639 BCL9O00512 1426 aa23.27■■□□□ 1.32
C6orf48-204ENST00000375639 PRIM1P49642 420 aaKnown RBP23.27■■□□□ 1.32
C6orf48-204ENST00000375639 CABP4P57796 275 aa23.26■■□□□ 1.31
C6orf48-204ENST00000375639 ERVV-2B6SEH9 535 aa23.25■■□□□ 1.31
C6orf48-204ENST00000375639 KCNQ2O43526 872 aa23.25■■□□□ 1.31
C6orf48-204ENST00000375639 TRIM35Q9UPQ4 493 aa23.25■■□□□ 1.31
C6orf48-204ENST00000375639 TRIM37O94972 964 aa23.24■■□□□ 1.31
C6orf48-204ENST00000375639 THUMPD2Q9BTF0 503 aaKnown RBP23.24■■□□□ 1.31
C6orf48-204ENST00000375639 DOT1LQ8TEK3 1739 aa23.24■■□□□ 1.31
C6orf48-204ENST00000375639 SCN11AQ9UI33 1791 aa23.23■■□□□ 1.31
C6orf48-204ENST00000375639 TEFQ10587 303 aa23.23■■□□□ 1.31
C6orf48-204ENST00000375639 TMOD3Q9NYL9 352 aa23.23■■□□□ 1.31
C6orf48-204ENST00000375639 TOGARAM1Q9Y4F4 1720 aa23.22■■□□□ 1.31
C6orf48-204ENST00000375639 NFATC2IPQ8NCF5 419 aa23.22■■□□□ 1.31
C6orf48-204ENST00000375639 PTF1AQ7RTS3 328 aa23.21■■□□□ 1.31
C6orf48-204ENST00000375639 BCL11BQ9C0K0 894 aaPredicted RBP23.21■■□□□ 1.31
C6orf48-204ENST00000375639 SLC52A2Q9HAB3 445 aa23.21■■□□□ 1.31
C6orf48-204ENST00000375639 CEMIPQ8WUJ3 1361 aa23.21■■□□□ 1.31
C6orf48-204ENST00000375639 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
C6orf48-204ENST00000375639 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms