RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZNF365Q70YC5 407 aa7.71□□□□□ -1.17
UBR4-204ENST00000375254 TRERF1Q96PN7 1200 aa7.71□□□□□ -1.17
UBR4-204ENST00000375254 SPA17Q15506 151 aa7.71□□□□□ -1.17
UBR4-204ENST00000375254 P3H3Q8IVL6 736 aa7.71□□□□□ -1.17
UBR4-204ENST00000375254 RABEP2Q9H5N1 569 aa7.71□□□□□ -1.17
UBR4-204ENST00000375254 HDGFP51858 240 aaKnown RBP7.71□□□□□ -1.17
UBR4-204ENST00000375254 HSP90AA5PQ58FG0 334 aa7.71□□□□□ -1.17
UBR4-204ENST00000375254 NSRP1Q9H0G5 558 aaKnown RBP7.71□□□□□ -1.17
UBR4-204ENST00000375254 CROCCP2Q86T23 111 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 GOLGA5Q8TBA6 731 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 SLU7O95391 586 aaKnown RBP7.71□□□□□ -1.18
UBR4-204ENST00000375254 PDCD7Q8N8D1 485 aaKnown RBP7.71□□□□□ -1.18
UBR4-204ENST00000375254 TRIM7Q9C029 511 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 POGKQ9P215 609 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 ERO1AQ96HE7 468 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 SRCIN1Q9C0H9 1055 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 USP25Q9UHP3 1055 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 FEZ2Q9UHY8 353 aaPredicted RBP7.71□□□□□ -1.18
UBR4-204ENST00000375254 NBPF7P0C2Y1 421 aaPredicted RBP7.71□□□□□ -1.18
UBR4-204ENST00000375254 ZNF428Q96B54 188 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 HDAC1Q13547 482 aaPredicted RBP7.71□□□□□ -1.18
UBR4-204ENST00000375254 DRC1Q96MC2 740 aa7.71□□□□□ -1.18
UBR4-204ENST00000375254 GBP1P32455 592 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 TAX1BP1Q86VP1 789 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 CCDC110Q8TBZ0 833 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 FBF1Q8TES7 1133 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 PRM3Q9NNZ6 103 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 KCNH8Q96L42 1107 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 ESF1Q9H501 851 aaKnown RBP7.7□□□□□ -1.18
UBR4-204ENST00000375254 CTAGE15A4D2H0 777 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 CTAGE8P0CG41 777 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 CTAGE6Q86UF2 777 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 HOOK3Q86VS8 718 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 CTAGE4Q8IX94 777 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 CCDC155Q8N6L0 562 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 THEGQ9P2T0 379 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 EPS15P42566 896 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 CEP128Q6ZU80 1094 aa7.7□□□□□ -1.18
UBR4-204ENST00000375254 MAP3K9P80192 1104 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 FAM76AQ8TAV0 307 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 JRKLQ9Y4A0 524 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 CETN2P41208 172 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 RGL3Q3MIN7 710 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 CCDC65Q8IXS2 484 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 RILPL2Q969X0 211 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 GCKP35557 465 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 SPECC1Q5M775 1068 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 TSNAXIP1Q2TAA8 658 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 RASSF2P50749 326 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 LRSAM1Q6UWE0 723 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 UBE2HP62256 183 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 LRRC23Q53EV4 343 aaPredicted RBP7.69□□□□□ -1.18
UBR4-204ENST00000375254 SETD5Q9C0A6 1442 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 PCK1P35558 622 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 SNX21Q969T3 373 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 CLIP2Q9UDT6 1046 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.69□□□□□ -1.181e-7■■□□□ 14.1
UBR4-204ENST00000375254 COG6Q9Y2V7 657 aa7.69□□□□□ -1.18
UBR4-204ENST00000375254 CCDC92Q53HC0 331 aaPredicted RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.68□□□□□ -1.181e-9■■□□□ 11.5
UBR4-204ENST00000375254 NBPF3Q9H094 633 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 DDX19AQ9NUU7 478 aaKnown RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 ZNF500O60304 480 aaPredicted RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 CACNA2D3Q8IZS8 1091 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 SH2B1Q9NRF2 756 aaPredicted RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 KIF4AO95239 1232 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 SETDB1Q15047 1291 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 IFI16Q16666 785 aaKnown RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 SNW1Q13573 536 aaKnown RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 LARP1BQ659C4 914 aaKnown RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 ALDH3A1P30838 453 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 DCAF11Q8TEB1 546 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 PLIN1O60240 522 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 TCP11Q8WWU5 503 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 TBC1D31Q96DN5 1066 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 POLE3Q9NRF9 147 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 FGFR1OPO95684 399 aaKnown RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 CCDC174Q6PII3 467 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 RMDN2Q96LZ7 410 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 ANO2Q9NQ90 1003 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 MCM6Q14566 821 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 TTC19Q6DKK2 380 aaPredicted RBP7.68□□□□□ -1.18
UBR4-204ENST00000375254 PPP6R1Q9UPN7 881 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 SCLT1Q96NL6 688 aa7.68□□□□□ -1.18
UBR4-204ENST00000375254 YEATS4O95619 227 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 IRX1P78414 480 aaPredicted RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 PHLDB2Q86SQ0 1253 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 NOL3O60936 208 aaKnown RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 RPAP2Q8IXW5 612 aaPredicted RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 SPATA32Q96LK8 384 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 PYM1Q9BRP8 204 aaKnown RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 ZSCAN26Q16670 478 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 GOLGA1Q92805 767 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 CDK5RAP3Q96JB5 506 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 FAM210AQ96ND0 272 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 SYCE3A1L190 88 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 FOXD4L6Q3SYB3 417 aaPredicted RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 FOXD4L3Q6VB84 417 aaPredicted RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 DTNBP1Q96EV8 351 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms