RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 AMPHP49418 695 aa15.41■□□□□ 0.06
UBR4-203ENST00000375225 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
UBR4-203ENST00000375225 TMEM57Q8N5G2 664 aa15.41■□□□□ 0.06
UBR4-203ENST00000375225 ZBTB40Q9NUA8 1239 aa15.41■□□□□ 0.06
UBR4-203ENST00000375225 MAP3K19Q56UN5 1328 aa15.41■□□□□ 0.06
UBR4-203ENST00000375225 SLIT3O75094 1523 aa15.41■□□□□ 0.06
UBR4-203ENST00000375225 RTL1A6NKG5 1358 aa15.4■□□□□ 0.06
UBR4-203ENST00000375225 ZNF853P0CG23 659 aa15.4■□□□□ 0.06
UBR4-203ENST00000375225 SMC5Q8IY18 1101 aa15.4■□□□□ 0.06
UBR4-203ENST00000375225 SLAIN2Q9P270 581 aa15.4■□□□□ 0.06
UBR4-203ENST00000375225 NFAT5O94916 1531 aa15.4■□□□□ 0.06
UBR4-203ENST00000375225 DLG5Q8TDM6 1919 aa15.39■□□□□ 0.05
UBR4-203ENST00000375225 VAMP4O75379 141 aa15.39■□□□□ 0.05
UBR4-203ENST00000375225 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
UBR4-203ENST00000375225 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
UBR4-203ENST00000375225 PHRF1Q9P1Y6 1649 aaKnown RBP15.39■□□□□ 0.05
UBR4-203ENST00000375225 TNS3Q68CZ2 1445 aa15.39■□□□□ 0.05
UBR4-203ENST00000375225 PXDNQ92626 1479 aa15.39■□□□□ 0.05
UBR4-203ENST00000375225 BRINP3Q76B58 766 aa15.38■□□□□ 0.05
UBR4-203ENST00000375225 MRPL50Q8N5N7 158 aaKnown RBP15.38■□□□□ 0.05
UBR4-203ENST00000375225 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
UBR4-203ENST00000375225 LTBP4Q8N2S1 1624 aa15.38■□□□□ 0.05
UBR4-203ENST00000375225 TWISTNBQ3B726 338 aaPredicted RBP15.38■□□□□ 0.05
UBR4-203ENST00000375225 RGPD1P0DJD0 1748 aa15.37■□□□□ 0.05
UBR4-203ENST00000375225 MBIPQ9NS73 344 aa15.37■□□□□ 0.05
UBR4-203ENST00000375225 USP19O94966 1318 aa15.37■□□□□ 0.05
UBR4-203ENST00000375225 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
UBR4-203ENST00000375225 NHSL1Q5SYE7 1610 aa15.36■□□□□ 0.05
UBR4-203ENST00000375225 EIF4A2Q14240 407 aaKnown RBP15.36■□□□□ 0.05
UBR4-203ENST00000375225 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
UBR4-203ENST00000375225 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
UBR4-203ENST00000375225 MED1Q15648 1581 aaPredicted RBP15.34■□□□□ 0.05
UBR4-203ENST00000375225 ABCC4O15439 1325 aa15.34■□□□□ 0.05
UBR4-203ENST00000375225 HOXC9P31274 260 aa15.34■□□□□ 0.05
UBR4-203ENST00000375225 NUCB1Q02818 461 aa15.34■□□□□ 0.05
UBR4-203ENST00000375225 KIAA0232Q92628 1395 aa15.33■□□□□ 0.05
UBR4-203ENST00000375225 GCP02774 474 aa15.33■□□□□ 0.05
UBR4-203ENST00000375225 NFKBIBQ15653 356 aa15.33■□□□□ 0.05
UBR4-203ENST00000375225 DDX17Q92841 729 aaKnown RBP15.33■□□□□ 0.05
UBR4-203ENST00000375225 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.04
UBR4-203ENST00000375225 CRYBG1Q9Y4K1 1723 aa15.33■□□□□ 0.04
UBR4-203ENST00000375225 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.04
UBR4-203ENST00000375225 ZBTB7BO15156 539 aaPredicted RBP15.32■□□□□ 0.04
UBR4-203ENST00000375225 CHD1LQ86WJ1 897 aa15.32■□□□□ 0.04
UBR4-203ENST00000375225 IP6K1Q92551 441 aa15.32■□□□□ 0.04
UBR4-203ENST00000375225 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
UBR4-203ENST00000375225 SLC4A3P48751 1232 aa15.31■□□□□ 0.04
UBR4-203ENST00000375225 RTF1Q92541 710 aaKnown RBP15.31■□□□□ 0.04
UBR4-203ENST00000375225 ROBO1Q9Y6N7 1651 aa15.31■□□□□ 0.04
UBR4-203ENST00000375225 PTPRCP08575 1304 aa15.3■□□□□ 0.04
UBR4-203ENST00000375225 ZBTB7CA1YPR0 619 aa15.3■□□□□ 0.04
UBR4-203ENST00000375225 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
UBR4-203ENST00000375225 THUMPD2Q9BTF0 503 aaKnown RBP15.3■□□□□ 0.04
UBR4-203ENST00000375225 ABCC6O95255 1503 aa15.29■□□□□ 0.04
UBR4-203ENST00000375225 ARHGEF25Q86VW2 580 aa15.29■□□□□ 0.04
UBR4-203ENST00000375225 C22orf23Q9BZE7 217 aa15.29■□□□□ 0.04
UBR4-203ENST00000375225 IGSF1Q8N6C5 1336 aa15.29■□□□□ 0.04
UBR4-203ENST00000375225 HTATSF1O43719 755 aaKnown RBP15.28■□□□□ 0.04
UBR4-203ENST00000375225 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
UBR4-203ENST00000375225 SEC24BO95487 1268 aa15.28■□□□□ 0.04
UBR4-203ENST00000375225 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
UBR4-203ENST00000375225 CHL1O00533 1208 aa15.27■□□□□ 0.04
UBR4-203ENST00000375225 TSPYL6Q8N831 410 aa15.27■□□□□ 0.04
UBR4-203ENST00000375225 KDRP35968 1356 aa15.27■□□□□ 0.04
UBR4-203ENST00000375225 AHDC1Q5TGY3 1603 aaPredicted RBP15.27■□□□□ 0.04
UBR4-203ENST00000375225 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.03
UBR4-203ENST00000375225 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.03
UBR4-203ENST00000375225 ABCA3Q99758 1704 aa15.26■□□□□ 0.03
UBR4-203ENST00000375225 MFAP1P55081 439 aaKnown RBP15.26■□□□□ 0.03
UBR4-203ENST00000375225 GSE1Q14687 1217 aa15.26■□□□□ 0.03
UBR4-203ENST00000375225 ANKRD45Q5TZF3 282 aa15.26■□□□□ 0.03
UBR4-203ENST00000375225 INTS3Q68E01 1043 aaKnown RBP15.26■□□□□ 0.03
UBR4-203ENST00000375225 AEBP1Q8IUX7 1158 aa15.26■□□□□ 0.03
UBR4-203ENST00000375225 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
UBR4-203ENST00000375225 EYA1Q99502 592 aa15.26■□□□□ 0.03
UBR4-203ENST00000375225 BCL11AQ9H165 835 aa15.26■□□□□ 0.03
UBR4-203ENST00000375225 FAM208AQ9UK61 1670 aaKnown RBP15.25■□□□□ 0.03
UBR4-203ENST00000375225 ELL2O00472 640 aaPredicted RBP15.25■□□□□ 0.03
UBR4-203ENST00000375225 HSCBQ8IWL3 235 aa15.25■□□□□ 0.03
UBR4-203ENST00000375225 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
UBR4-203ENST00000375225 RGPD5Q99666 1765 aa15.25■□□□□ 0.03
UBR4-203ENST00000375225 FAM83GA6ND36 823 aa15.24■□□□□ 0.03
UBR4-203ENST00000375225 RPAP2Q8IXW5 612 aaPredicted RBP15.24■□□□□ 0.03
UBR4-203ENST00000375225 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
UBR4-203ENST00000375225 CAMTA1Q9Y6Y1 1673 aa15.24■□□□□ 0.03
UBR4-203ENST00000375225 CPDO75976 1380 aa15.23■□□□□ 0.03
UBR4-203ENST00000375225 ZC3H6P61129 1189 aaKnown RBP15.23■□□□□ 0.03
UBR4-203ENST00000375225 BABAM1Q9NWV8 329 aa15.23■□□□□ 0.03
UBR4-203ENST00000375225 RGPD2P0DJD1 1756 aa15.23■□□□□ 0.03
UBR4-203ENST00000375225 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
UBR4-203ENST00000375225 COL18A1P39060 1754 aa15.22■□□□□ 0.03
UBR4-203ENST00000375225 TOM1O60784 492 aa15.22■□□□□ 0.03
UBR4-203ENST00000375225 HMMRO75330 724 aa15.22■□□□□ 0.03
UBR4-203ENST00000375225 RBM25P49756 843 aaKnown RBP15.22■□□□□ 0.03
UBR4-203ENST00000375225 ANKRD24Q8TF21 1146 aa15.22■□□□□ 0.03
UBR4-203ENST00000375225 TBC1D2Q9BYX2 928 aa15.22■□□□□ 0.03
UBR4-203ENST00000375225 PHLPP1O60346 1717 aa15.21■□□□□ 0.03
UBR4-203ENST00000375225 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
UBR4-203ENST00000375225 CRB1P82279 1406 aa15.21■□□□□ 0.03
UBR4-203ENST00000375225 CABLES1Q8TDN4 633 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms