RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 SENP3Q9H4L4 574 aaPredicted RBP25.05■■□□□ 1.6
TMEFF1-201ENST00000374879 RIOK3O14730 519 aaKnown RBP25.04■■□□□ 1.6
TMEFF1-201ENST00000374879 ST18O60284 1047 aa25.03■■□□□ 1.6
TMEFF1-201ENST00000374879 ZBTB7BO15156 539 aaPredicted RBP25.03■■□□□ 1.6
TMEFF1-201ENST00000374879 TRIM35Q9UPQ4 493 aa25.03■■□□□ 1.6
TMEFF1-201ENST00000374879 ADCY5O95622 1261 aa25.02■■□□□ 1.6
TMEFF1-201ENST00000374879 IDI1Q13907 227 aa25.02■■□□□ 1.6
TMEFF1-201ENST00000374879 SIRT2Q8IXJ6 389 aa25.02■■□□□ 1.6
TMEFF1-201ENST00000374879 NSD2O96028 1365 aa25.02■■□□□ 1.6
TMEFF1-201ENST00000374879 NEO1Q92859 1461 aa25.01■■□□□ 1.59
TMEFF1-201ENST00000374879 STK26Q9P289 416 aa25■■□□□ 1.59
TMEFF1-201ENST00000374879 ABCC11Q96J66 1382 aa25■■□□□ 1.59
TMEFF1-201ENST00000374879 DIP2CQ9Y2E4 1556 aa25■■□□□ 1.59
TMEFF1-201ENST00000374879 UVSSAQ2YD98 709 aa24.99■■□□□ 1.59
TMEFF1-201ENST00000374879 SYAP1Q96A49 352 aaPredicted RBP24.99■■□□□ 1.59
TMEFF1-201ENST00000374879 FEZ1Q99689 392 aa24.99■■□□□ 1.59
TMEFF1-201ENST00000374879 ADGRB2O60241 1585 aa24.99■■□□□ 1.59
TMEFF1-201ENST00000374879 TMPOP42166 694 aaKnown RBP24.99■■□□□ 1.59
TMEFF1-201ENST00000374879 PLEKHM2Q8IWE5 1019 aa24.99■■□□□ 1.59
TMEFF1-201ENST00000374879 DIAPH3Q9NSV4 1193 aa24.99■■□□□ 1.59
TMEFF1-201ENST00000374879 OGFRQ9NZT2 677 aa24.98■■□□□ 1.59
TMEFF1-201ENST00000374879 SRPK2P78362 688 aaKnown RBP24.98■■□□□ 1.59
TMEFF1-201ENST00000374879 CTIFO43310 598 aaKnown RBP24.97■■□□□ 1.59
TMEFF1-201ENST00000374879 A0A1W2PP64 1363 aa24.97■■□□□ 1.59
TMEFF1-201ENST00000374879 GADD45BO75293 160 aaPredicted RBP24.96■■□□□ 1.59
TMEFF1-201ENST00000374879 PLCD3Q8N3E9 789 aa24.96■■□□□ 1.59
TMEFF1-201ENST00000374879 FAM184AQ8NB25 1140 aa24.96■■□□□ 1.59
TMEFF1-201ENST00000374879 CHAF1AQ13111 956 aaPredicted RBP24.95■■□□□ 1.58
TMEFF1-201ENST00000374879 BRD1O95696 1058 aa24.95■■□□□ 1.58
TMEFF1-201ENST00000374879 FOXD4L6Q3SYB3 417 aaPredicted RBP24.95■■□□□ 1.58
TMEFF1-201ENST00000374879 FOXD4L3Q6VB84 417 aaPredicted RBP24.95■■□□□ 1.58
TMEFF1-201ENST00000374879 GDPD2Q9HCC8 539 aa24.95■■□□□ 1.58
TMEFF1-201ENST00000374879 SLC52A1Q9NWF4 448 aa24.95■■□□□ 1.58
TMEFF1-201ENST00000374879 KIAA1524Q8TCG1 905 aa24.94■■□□□ 1.58
TMEFF1-201ENST00000374879 MED14O60244 1454 aa24.94■■□□□ 1.58
TMEFF1-201ENST00000374879 TTC22Q5TAA0 569 aa24.94■■□□□ 1.58
TMEFF1-201ENST00000374879 INTS3Q68E01 1043 aaKnown RBP24.94■■□□□ 1.58
TMEFF1-201ENST00000374879 PLEKHF1Q96S99 279 aa24.94■■□□□ 1.58
TMEFF1-201ENST00000374879 GGNBP2Q9H3C7 697 aa24.94■■□□□ 1.58
TMEFF1-201ENST00000374879 PYCARDQ9ULZ3 195 aa24.94■■□□□ 1.58
TMEFF1-201ENST00000374879 PHF14O94880 888 aa24.93■■□□□ 1.58
TMEFF1-201ENST00000374879 CDK11BP21127 795 aaKnown RBP24.93■■□□□ 1.58
TMEFF1-201ENST00000374879 IRX5P78411 483 aaPredicted RBP24.93■■□□□ 1.58
TMEFF1-201ENST00000374879 ALDH1L2Q3SY69 923 aa24.93■■□□□ 1.58
TMEFF1-201ENST00000374879 C16orf71Q8IYS4 520 aaPredicted RBP24.93■■□□□ 1.58
TMEFF1-201ENST00000374879 ZFYVE9O95405 1425 aa24.92■■□□□ 1.58
TMEFF1-201ENST00000374879 SLFN14P0C7P3 912 aa24.92■■□□□ 1.58
TMEFF1-201ENST00000374879 U2SURPO15042 1029 aaKnown RBP24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 KCNJ4P48050 445 aa24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 SMARCA5O60264 1052 aaPredicted RBP24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 HCLS1P14317 486 aaPredicted RBP24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 GABPB1Q06547 395 aaPredicted RBP24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 CFAP44Q96MT7 982 aa24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 KCNF1Q9H3M0 494 aa24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 REREQ9P2R6 1566 aa24.91■■□□□ 1.58
TMEFF1-201ENST00000374879 NCBP1Q09161 790 aaKnown RBP24.9■■□□□ 1.58
TMEFF1-201ENST00000374879 TMX3Q96JJ7 454 aa24.9■■□□□ 1.58
TMEFF1-201ENST00000374879 YEATS2Q9ULM3 1422 aa24.9■■□□□ 1.58
TMEFF1-201ENST00000374879 CTNNA3Q9UI47 895 aa24.9■■□□□ 1.58
TMEFF1-201ENST00000374879 IL16Q14005 1332 aa24.9■■□□□ 1.58
TMEFF1-201ENST00000374879 MINK1Q8N4C8 1332 aaPredicted RBP24.9■■□□□ 1.58
TMEFF1-201ENST00000374879 MYO5BQ9ULV0 1848 aa24.89■■□□□ 1.58
TMEFF1-201ENST00000374879 PLCB2Q00722 1185 aa24.89■■□□□ 1.57
TMEFF1-201ENST00000374879 KDM4AO75164 1064 aa24.88■■□□□ 1.57
TMEFF1-201ENST00000374879 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
TMEFF1-201ENST00000374879 RICTORQ6R327 1708 aa24.88■■□□□ 1.57
TMEFF1-201ENST00000374879 USP48Q86UV5 1035 aa24.88■■□□□ 1.57
TMEFF1-201ENST00000374879 PTPRMP28827 1452 aa24.86■■□□□ 1.57
TMEFF1-201ENST00000374879 TERF2IPQ9NYB0 399 aa24.86■■□□□ 1.57
TMEFF1-201ENST00000374879 ATAD2Q6PL18 1390 aa24.86■■□□□ 1.57
TMEFF1-201ENST00000374879 SDSP20132 328 aa24.86■■□□□ 1.57
TMEFF1-201ENST00000374879 NEK4P51957 841 aa24.86■■□□□ 1.57
TMEFF1-201ENST00000374879 OTUD7AQ8TE49 926 aaPredicted RBP24.86■■□□□ 1.57
TMEFF1-201ENST00000374879 FYB1O15117 783 aa24.85■■□□□ 1.57
TMEFF1-201ENST00000374879 MAPK8IP2Q13387 824 aaPredicted RBP24.85■■□□□ 1.57
TMEFF1-201ENST00000374879 TPRNQ4KMQ1 711 aa24.85■■□□□ 1.57
TMEFF1-201ENST00000374879 AP5Z1O43299 807 aa24.84■■□□□ 1.57
TMEFF1-201ENST00000374879 DDX41Q9UJV9 622 aaKnown RBP24.84■■□□□ 1.57
TMEFF1-201ENST00000374879 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
TMEFF1-201ENST00000374879 PREX1Q8TCU6 1659 aa24.83■■□□□ 1.57
TMEFF1-201ENST00000374879 YTHDC2Q9H6S0 1430 aaKnown RBP24.83■■□□□ 1.57
TMEFF1-201ENST00000374879 SPC24Q8NBT2 197 aa24.82■■□□□ 1.56
TMEFF1-201ENST00000374879 COL3A1P02461 1466 aaPredicted RBP24.82■■□□□ 1.56
TMEFF1-201ENST00000374879 CCDC183Q5T5S1 534 aa24.82■■□□□ 1.56
TMEFF1-201ENST00000374879 CASC1Q6TDU7 716 aa24.82■■□□□ 1.56
TMEFF1-201ENST00000374879 BRPF1P55201 1214 aaPredicted RBP24.82■■□□□ 1.56
TMEFF1-201ENST00000374879 NAA30Q147X3 362 aaPredicted RBP24.82■■□□□ 1.56
TMEFF1-201ENST00000374879 REC8O95072 547 aa24.81■■□□□ 1.56
TMEFF1-201ENST00000374879 NOL8Q76FK4 1167 aaKnown RBP24.81■■□□□ 1.56
TMEFF1-201ENST00000374879 MRPL50Q8N5N7 158 aaKnown RBP24.81■■□□□ 1.56
TMEFF1-201ENST00000374879 CD163L1Q9NR16 1453 aa24.81■■□□□ 1.56
TMEFF1-201ENST00000374879 TERF2Q15554 542 aa24.81■■□□□ 1.56
TMEFF1-201ENST00000374879 FBXO31Q5XUX0 539 aaPredicted RBP24.81■■□□□ 1.56
TMEFF1-201ENST00000374879 DCTPP1Q9H773 170 aa24.81■■□□□ 1.56
TMEFF1-201ENST00000374879 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
TMEFF1-201ENST00000374879 CUL4AQ13619 759 aa24.8■■□□□ 1.56
TMEFF1-201ENST00000374879 MORC2Q9Y6X9 1032 aaPredicted RBP24.8■■□□□ 1.56
TMEFF1-201ENST00000374879 CCDC66A2RUB6 948 aa24.79■■□□□ 1.56
TMEFF1-201ENST00000374879 MX1P20591 662 aa24.79■■□□□ 1.56
TMEFF1-201ENST00000374879 HDGFL2Q7Z4V5 671 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms