RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 PHAXQ9H814 394 aaKnown RBP9.79□□□□□ -0.84
HSPG2-203ENST00000374695 IFFO1Q0D2I5 559 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 CASQ1P31415 396 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 MEX3CQ5U5Q3 659 aaKnown RBP9.78□□□□□ -0.84
HSPG2-203ENST00000374695 HOMEZQ8IX15 550 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 PPP6R1Q9UPN7 881 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 DHX57Q6P158 1386 aaKnown RBP9.78□□□□□ -0.84
HSPG2-203ENST00000374695 KANK4Q5T7N3 995 aaPredicted RBP9.78□□□□□ -0.84
HSPG2-203ENST00000374695 CTAGE5O15320 804 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 RBM10P98175 930 aaKnown RBP9.78□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC150Q8NCX0 1101 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 SREK1Q8WXA9 508 aaKnown RBP9.78□□□□□ -0.84
HSPG2-203ENST00000374695 FHOD3Q2V2M9 1422 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 MAP3K11Q16584 847 aa9.78□□□□□ -0.84
HSPG2-203ENST00000374695 TNIP1Q15025 636 aa9.77□□□□□ -0.85
HSPG2-203ENST00000374695 HMGB2P26583 209 aaKnown RBP9.77□□□□□ -0.85
HSPG2-203ENST00000374695 CCDC97Q96F63 343 aaPredicted RBP9.77□□□□□ -0.85
HSPG2-203ENST00000374695 ALS2CR12Q96Q35 445 aa9.77□□□□□ -0.85
HSPG2-203ENST00000374695 TTC39AQ5SRH9 613 aa9.77□□□□□ -0.85
HSPG2-203ENST00000374695 RAPGEF4Q8WZA2 1011 aa9.77□□□□□ -0.85
HSPG2-203ENST00000374695 TUBB4AP04350 444 aa9.77□□□□□ -0.85
HSPG2-203ENST00000374695 SMAP1Q8IYB5 467 aaPredicted RBP9.77□□□□□ -0.85
HSPG2-203ENST00000374695 HECW1Q76N89 1606 aa9.77□□□□□ -0.85
HSPG2-203ENST00000374695 SETSIPP0DME0 302 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 FKBP15Q5T1M5 1219 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 GSTTP1A0A1W2PQM5 241 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 BRPF3Q9ULD4 1205 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 CLCN1P35523 988 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 FERP16591 822 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 SYTL4Q96C24 671 aaPredicted RBP9.76□□□□□ -0.85
HSPG2-203ENST00000374695 FSD2A1L4K1 749 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
HSPG2-203ENST00000374695 ZHX3Q9H4I2 956 aa9.76□□□□□ -0.85
HSPG2-203ENST00000374695 SURF6O75683 361 aaKnown RBP9.75□□□□□ -0.85
HSPG2-203ENST00000374695 CAVIN2O95810 425 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 GSDMDP57764 484 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 EHBP1Q8NDI1 1231 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 CFAP100Q494V2 611 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 TSG101Q99816 390 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 IVLP07476 585 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 DAAM2Q86T65 1068 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 FAM177A1Q8N128 213 aaPredicted RBP9.75□□□□□ -0.85
HSPG2-203ENST00000374695 NECTIN2Q92692 538 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 GOLGA4Q13439 2230 aaKnown RBP9.75□□□□□ -0.85
HSPG2-203ENST00000374695 CEBPZQ03701 1054 aaKnown RBP9.75□□□□□ -0.85
HSPG2-203ENST00000374695 CCDC183Q5T5S1 534 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 USO1O60763 962 aaKnown RBP9.75□□□□□ -0.85
HSPG2-203ENST00000374695 MATR3P43243 847 aaKnown RBP eCLIP9.75□□□□□ -0.85
HSPG2-203ENST00000374695 PAFAH1B1P43034 410 aa9.75□□□□□ -0.85
HSPG2-203ENST00000374695 RAB34Q9BZG1 259 aa9.74□□□□□ -0.85
HSPG2-203ENST00000374695 ANKS4BQ8N8V4 417 aa9.74□□□□□ -0.85
HSPG2-203ENST00000374695 ZNF287Q9HBT7 754 aa9.74□□□□□ -0.85
HSPG2-203ENST00000374695 PAIP2Q9BPZ3 127 aaKnown RBP9.74□□□□□ -0.85
HSPG2-203ENST00000374695 FERMT1Q9BQL6 677 aa9.74□□□□□ -0.85
HSPG2-203ENST00000374695 DDX23Q9BUQ8 820 aaKnown RBP9.74□□□□□ -0.85
HSPG2-203ENST00000374695 UBAC1Q9BSL1 405 aa9.74□□□□□ -0.85
HSPG2-203ENST00000374695 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
HSPG2-203ENST00000374695 SAMD1Q6SPF0 538 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-203ENST00000374695 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-203ENST00000374695 CEP112Q8N8E3 955 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 NSRP1Q9H0G5 558 aaKnown RBP9.73□□□□□ -0.85
HSPG2-203ENST00000374695 BLOC1S2Q6QNY1 142 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 SEC63Q9UGP8 760 aaKnown RBP9.73□□□□□ -0.85
HSPG2-203ENST00000374695 PPP4R3AQ6IN85 833 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 PYM1Q9BRP8 204 aaKnown RBP9.73□□□□□ -0.85
HSPG2-203ENST00000374695 HNRNPMP52272 730 aaKnown RBP eCLIP9.73□□□□□ -0.85
HSPG2-203ENST00000374695 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 ARHGAP5Q13017 1502 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 NBPF1Q3BBV0 1214 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 CCDC113Q9H0I3 377 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 CETN1Q12798 172 aa9.73□□□□□ -0.85
HSPG2-203ENST00000374695 DDX46Q7L014 1031 aaKnown RBP9.73□□□□□ -0.85
HSPG2-203ENST00000374695 SCAND2PQ9GZW5 306 aaPredicted RBP9.73□□□□□ -0.85
HSPG2-203ENST00000374695 SEPT6Q14141 434 aa9.72□□□□□ -0.85
HSPG2-203ENST00000374695 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
HSPG2-203ENST00000374695 SH2B1Q9NRF2 756 aaPredicted RBP9.72□□□□□ -0.85
HSPG2-203ENST00000374695 ERICH3Q5RHP9 1530 aa9.72□□□□□ -0.85
HSPG2-203ENST00000374695 DCAF8L1A6NGE4 600 aa9.72□□□□□ -0.85
HSPG2-203ENST00000374695 GOPCQ9HD26 462 aa9.72□□□□□ -0.85
HSPG2-203ENST00000374695 U3KPZ7 1027 aaPredicted RBP9.72□□□□□ -0.85
HSPG2-203ENST00000374695 HSPA4P34932 840 aa9.71□□□□□ -0.85
HSPG2-203ENST00000374695 TICAM2Q86XR7 235 aa9.71□□□□□ -0.85
HSPG2-203ENST00000374695 RNF187Q5TA31 235 aaPredicted RBP9.71□□□□□ -0.85
HSPG2-203ENST00000374695 IKBKGQ9Y6K9 419 aa9.71□□□□□ -0.85
HSPG2-203ENST00000374695 A6NNZ2 444 aa9.71□□□□□ -0.85
HSPG2-203ENST00000374695 TUBB8Q3ZCM7 444 aa9.71□□□□□ -0.85
HSPG2-203ENST00000374695 PNISRQ8TF01 805 aaKnown RBP9.71□□□□□ -0.85
HSPG2-203ENST00000374695 ANO10Q9NW15 660 aa9.71□□□□□ -0.85
HSPG2-203ENST00000374695 PAXBP1Q9Y5B6 917 aa9.71□□□□□ -0.85
HSPG2-203ENST00000374695 TSNARE1Q96NA8 513 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
HSPG2-203ENST00000374695 CNNM1Q9NRU3 951 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 EHBP1L1Q8N3D4 1523 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 CACNA2D4Q7Z3S7 1137 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 FAM114A1Q8IWE2 563 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 AIMP1Q12904 312 aaKnown RBP9.71□□□□□ -0.86
HSPG2-203ENST00000374695 PDRG1Q9NUG6 133 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 PLEKHO1Q53GL0 409 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms